RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 ZNF833PQ6ZTB9 187 aa14.85□□□□□ -0.03
ECHDC1-214ENST00000474289 RAI1Q7Z5J4 1906 aaPredicted RBP14.85□□□□□ -0.03
ECHDC1-214ENST00000474289 TMEM189A5PLL7 270 aa14.84□□□□□ -0.03
ECHDC1-214ENST00000474289 IGLV1-44P01699 117 aa14.84□□□□□ -0.03
ECHDC1-214ENST00000474289 TIMM23BQ5SRD1 257 aa14.84□□□□□ -0.03
ECHDC1-214ENST00000474289 SIGMAR1Q99720 223 aa14.84□□□□□ -0.03
ECHDC1-214ENST00000474289 SMPXQ9UHP9 88 aa14.84□□□□□ -0.03
ECHDC1-214ENST00000474289 CFAP47Q6ZTR5 3102 aa14.84□□□□□ -0.03
ECHDC1-214ENST00000474289 BMI1P35226 326 aa14.84□□□□□ -0.03
ECHDC1-214ENST00000474289 S100A7AQ86SG5 101 aa14.84□□□□□ -0.03
ECHDC1-214ENST00000474289 D6R8Y8 96 aa14.83□□□□□ -0.04
ECHDC1-214ENST00000474289 NKX2-8O15522 239 aa14.83□□□□□ -0.04
ECHDC1-214ENST00000474289 EXOC3-AS1Q8N2X6 119 aa14.83□□□□□ -0.04
ECHDC1-214ENST00000474289 TMEM167AQ8TBQ9 72 aa14.83□□□□□ -0.04
ECHDC1-214ENST00000474289 ZNF414Q96IQ9 312 aa14.83□□□□□ -0.04
ECHDC1-214ENST00000474289 ASCL2Q99929 193 aa14.83□□□□□ -0.04
ECHDC1-214ENST00000474289 TPPP3Q9BW30 176 aa14.83□□□□□ -0.04
ECHDC1-214ENST00000474289 LINC00574Q9H8X3 128 aa14.83□□□□□ -0.04
ECHDC1-214ENST00000474289 SMIM13P0DJ93 91 aa14.83□□□□□ -0.04
ECHDC1-214ENST00000474289 DEFB108BQ8NET1 73 aa14.83□□□□□ -0.04
ECHDC1-214ENST00000474289 OTORQ9NRC9 128 aa14.83□□□□□ -0.04
ECHDC1-214ENST00000474289 SMG1Q96Q15 3661 aaKnown RBP14.82□□□□□ -0.04
ECHDC1-214ENST00000474289 INTS1Q8N201 2190 aaKnown RBP14.82□□□□□ -0.04
ECHDC1-214ENST00000474289 SPRY3O43610 288 aa14.82□□□□□ -0.04
ECHDC1-214ENST00000474289 PSG3Q16557 428 aa14.82□□□□□ -0.04
ECHDC1-214ENST00000474289 HOXB4P17483 251 aaPredicted RBP14.82□□□□□ -0.04
ECHDC1-214ENST00000474289 FXYD2P54710 66 aa14.82□□□□□ -0.04
ECHDC1-214ENST00000474289 FAM216BQ8N7L0 139 aa14.82□□□□□ -0.04
ECHDC1-214ENST00000474289 TRGV9Q99603 122 aa14.82□□□□□ -0.04
ECHDC1-214ENST00000474289 CACNA1GO43497 2377 aa14.82□□□□□ -0.04
ECHDC1-214ENST00000474289 TRIOBPQ9H2D6 2365 aa14.81□□□□□ -0.04
ECHDC1-214ENST00000474289 A0A1B0GW15 77 aa14.81□□□□□ -0.04
ECHDC1-214ENST00000474289 A0A1W2PPI3 338 aa14.81□□□□□ -0.04
ECHDC1-214ENST00000474289 LAMTOR5O43504 91 aa14.81□□□□□ -0.04
ECHDC1-214ENST00000474289 C1orf162Q8NEQ5 155 aaPredicted RBP14.81□□□□□ -0.04
ECHDC1-214ENST00000474289 C18orf15Q96N68 181 aa14.81□□□□□ -0.04
ECHDC1-214ENST00000474289 GAFA1Q96PS6 74 aa14.81□□□□□ -0.04
ECHDC1-214ENST00000474289 CCL13Q99616 98 aa14.81□□□□□ -0.04
ECHDC1-214ENST00000474289 FBLL1A6NHQ2 334 aaKnown RBP14.81□□□□□ -0.04
ECHDC1-214ENST00000474289 HBDP02042 147 aa14.81□□□□□ -0.04
ECHDC1-214ENST00000474289 GCSHP23434 173 aa14.81□□□□□ -0.04
ECHDC1-214ENST00000474289 HCP5Q6MZN7 132 aa14.81□□□□□ -0.04
ECHDC1-214ENST00000474289 TSSC4Q9Y5U2 329 aaPredicted RBP14.81□□□□□ -0.04
ECHDC1-214ENST00000474289 CRYGCP07315 174 aa14.8□□□□□ -0.04
ECHDC1-214ENST00000474289 FTH1P19P0C7X4 201 aa14.8□□□□□ -0.04
ECHDC1-214ENST00000474289 KIR2DL2P43627 348 aaPredicted RBP14.8□□□□□ -0.04
ECHDC1-214ENST00000474289 C8orf46Q8TAG6 207 aa14.8□□□□□ -0.04
ECHDC1-214ENST00000474289 IFI27L1Q96BM0 104 aa14.8□□□□□ -0.04
ECHDC1-214ENST00000474289 VGLL1Q99990 258 aa14.8□□□□□ -0.04
ECHDC1-214ENST00000474289 TNRC18O15417 2968 aaPredicted RBP14.8□□□□□ -0.04
ECHDC1-214ENST00000474289 IGHV3-21A0A0B4J1V1 117 aa14.8□□□□□ -0.04
ECHDC1-214ENST00000474289 K7ERJ3 54 aa14.8□□□□□ -0.04
ECHDC1-214ENST00000474289 PRB4P10163 310 aaPredicted RBP14.8□□□□□ -0.04
ECHDC1-214ENST00000474289 PAX8Q06710 450 aa14.8□□□□□ -0.04
ECHDC1-214ENST00000474289 ZNF493Q6ZR52 646 aa14.8□□□□□ -0.04
ECHDC1-214ENST00000474289 OR4C13Q8NGP0 309 aa14.8□□□□□ -0.04
ECHDC1-214ENST00000474289 PRELID3AQ96N28 172 aa14.8□□□□□ -0.04
ECHDC1-214ENST00000474289 DKK2Q9UBU2 259 aa14.8□□□□□ -0.04
ECHDC1-214ENST00000474289 DCHS1Q96JQ0 3298 aa14.8□□□□□ -0.04
ECHDC1-214ENST00000474289 ZDBF2Q9HCK1 2354 aa14.79□□□□□ -0.04
ECHDC1-214ENST00000474289 A0A1B0GV72 72 aa14.79□□□□□ -0.04
ECHDC1-214ENST00000474289 SERTM2A0A1B0GWG4 89 aa14.79□□□□□ -0.04
ECHDC1-214ENST00000474289 GAGE12HA6NDE8 117 aa14.79□□□□□ -0.04
ECHDC1-214ENST00000474289 DHRS13Q6UX07 377 aa14.79□□□□□ -0.04
ECHDC1-214ENST00000474289 BCL6BQ8N143 479 aaPredicted RBP14.79□□□□□ -0.04
ECHDC1-214ENST00000474289 OR10X1Q8NGY0 326 aa14.79□□□□□ -0.04
ECHDC1-214ENST00000474289 TPSG1Q9NRR2 321 aa14.79□□□□□ -0.04
ECHDC1-214ENST00000474289 TM4SF5O14894 197 aa14.78□□□□□ -0.04
ECHDC1-214ENST00000474289 CD300EQ496F6 205 aaPredicted RBP14.78□□□□□ -0.04
ECHDC1-214ENST00000474289 ZNF207O43670 478 aaKnown RBP14.78□□□□□ -0.04
ECHDC1-214ENST00000474289 IGLV2-23P01705 113 aa14.78□□□□□ -0.04
ECHDC1-214ENST00000474289 TMEM164Q5U3C3 297 aa14.78□□□□□ -0.04
ECHDC1-214ENST00000474289 AMN1Q8IY45 258 aa14.78□□□□□ -0.04
ECHDC1-214ENST00000474289 ATP6V0BQ99437 205 aa14.78□□□□□ -0.04
ECHDC1-214ENST00000474289 U3KQK5 164 aa14.78□□□□□ -0.04
ECHDC1-214ENST00000474289 PLCE1Q9P212 2302 aa14.78□□□□□ -0.04
ECHDC1-214ENST00000474289 CRIP1P50238 77 aa14.77□□□□□ -0.04
ECHDC1-214ENST00000474289 DIAPH2-AS1Q14236 149 aa14.77□□□□□ -0.04
ECHDC1-214ENST00000474289 TMEM30BQ3MIR4 351 aa14.77□□□□□ -0.04
ECHDC1-214ENST00000474289 TMEM213A2RRL7 107 aa14.77□□□□□ -0.05
ECHDC1-214ENST00000474289 TNFRSF1AP19438 455 aa14.77□□□□□ -0.05
ECHDC1-214ENST00000474289 WFDC3Q8IUB2 231 aa14.77□□□□□ -0.05
ECHDC1-214ENST00000474289 ORMDL3Q8N138 153 aa14.77□□□□□ -0.05
ECHDC1-214ENST00000474289 PHLDA1Q8WV24 401 aaPredicted RBP14.77□□□□□ -0.05
ECHDC1-214ENST00000474289 HIGD1AQ9Y241 93 aa14.77□□□□□ -0.05
ECHDC1-214ENST00000474289 IGKV2D-26A0A0A0MRZ7 120 aa14.76□□□□□ -0.05
ECHDC1-214ENST00000474289 TRBV6-1A0A0K0K1D8 114 aa14.76□□□□□ -0.05
ECHDC1-214ENST00000474289 Q5PR19 223 aa14.76□□□□□ -0.05
ECHDC1-214ENST00000474289 FAM104BQ5XKR9 115 aa14.76□□□□□ -0.05
ECHDC1-214ENST00000474289 Q6AWC8 147 aa14.76□□□□□ -0.05
ECHDC1-214ENST00000474289 TTTY13Q9BZ97 58 aa14.76□□□□□ -0.05
ECHDC1-214ENST00000474289 RNF7Q9UBF6 113 aa14.76□□□□□ -0.05
ECHDC1-214ENST00000474289 SLC25A17O43808 307 aa14.76□□□□□ -0.05
ECHDC1-214ENST00000474289 NDUFS7O75251 213 aa14.76□□□□□ -0.05
ECHDC1-214ENST00000474289 APELAP0DMC3 54 aa14.76□□□□□ -0.05
ECHDC1-214ENST00000474289 ZNF788Q6ZQV5 615 aa14.76□□□□□ -0.05
ECHDC1-214ENST00000474289 C9orf106Q8NAJ2 232 aa14.76□□□□□ -0.05
ECHDC1-214ENST00000474289 SPANXB1Q9NS25 103 aaPredicted RBP14.76□□□□□ -0.05
ECHDC1-214ENST00000474289 CT45A10P0DMU9 189 aa14.75□□□□□ -0.05
ECHDC1-214ENST00000474289 LYZP61626 148 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms