RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 HAGHQ16775 308 aa7.89□□□□□ -1.15
PRPF38A-202ENST00000474048 TCTEX1D4Q5JR98 221 aa7.89□□□□□ -1.15
PRPF38A-202ENST00000474048 TOR2AQ5JU69 321 aa7.89□□□□□ -1.15
PRPF38A-202ENST00000474048 C12orf54Q6X4T0 127 aa7.89□□□□□ -1.15
PRPF38A-202ENST00000474048 REC114Q7Z4M0 266 aa7.89□□□□□ -1.15
PRPF38A-202ENST00000474048 C3orf56Q8N813 242 aa7.89□□□□□ -1.15
PRPF38A-202ENST00000474048 BLNKQ8WV28 456 aa7.89□□□□□ -1.15
PRPF38A-202ENST00000474048 SLC25A2Q9BXI2 301 aa7.89□□□□□ -1.15
PRPF38A-202ENST00000474048 AAMDCQ9H7C9 122 aa7.89□□□□□ -1.15
PRPF38A-202ENST00000474048 TMEM14CQ9P0S9 112 aa7.89□□□□□ -1.15
PRPF38A-202ENST00000474048 IGHV3-49A0A0A0MS15 119 aa7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 TRAV5A0A0B4J249 113 aa7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 IGHV3-66A0A0C4DH42 116 aa7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 IGHV7-4-1A0A0J9YVY3 117 aa7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 LINC00862A6NCI5 91 aa7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 RBFOX3A6NFN3 312 aa7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 EIF3GO75821 320 aaKnown RBP eCLIP7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 CD5P06127 495 aa7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 BCL2P10415 239 aa7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 CRYBB3P26998 211 aa7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 MYCNOSP40205 109 aa7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 UBE2G2P60604 165 aa7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 GUK1Q16774 197 aa7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 UQCC3Q6UW78 93 aa7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 UNQ9165/PRO28630Q6UXU0 137 aa7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 SSX7Q7RTT5 188 aa7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 WIPF2Q8TF74 440 aaPredicted RBP7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 FAM210AQ96ND0 272 aa7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 CITED4Q96RK1 184 aa7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 TXNDC17Q9BRA2 123 aa7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 NKX6-2Q9C056 277 aaPredicted RBP7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 MED9Q9NWA0 146 aa7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 VAX2Q9UIW0 290 aa7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 ARL2-SNX15V9GYD0 113 aa7.88□□□□□ -1.15
PRPF38A-202ENST00000474048 IGHV3OR16-13A0A075B7E8 117 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 IGHV3-74A0A0B4J1X5 117 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 A8MWP6 167 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 C11orf94C9JXX5 98 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 F6UZH7 168 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 OVOL1O14753 267 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 NBEAP1P0C6P0 100 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 PYYP10082 97 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 HIST1H1EP10412 219 aaKnown RBP7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 CEBPGP53567 150 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 PAFAH1B2P68402 229 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 PSG9Q00887 426 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 TM4SF20Q53R12 229 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 SAMD13Q5VXD3 122 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 SIGLEC15Q6ZMC9 328 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 C18orf65Q6ZTR6 163 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 OR9G4Q8NGQ1 327 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 LYPD6BQ8NI32 183 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 CMTM2Q8TAZ6 248 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 RAX2Q96IS3 184 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 DUX3Q96PT4 197 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 RHPN1-AS1Q9BWJ2 59 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 TMPRSS5Q9H3S3 457 aa7.87□□□□□ -1.15
PRPF38A-202ENST00000474048 BUB3O43684 328 aa7.86□□□□□ -1.15
PRPF38A-202ENST00000474048 PDE6DO43924 150 aa7.86□□□□□ -1.15
PRPF38A-202ENST00000474048 PAGE4O60829 102 aa7.86□□□□□ -1.15
PRPF38A-202ENST00000474048 GP9P14770 177 aa7.86□□□□□ -1.15
PRPF38A-202ENST00000474048 CSN1S1P47710 185 aa7.86□□□□□ -1.15
PRPF38A-202ENST00000474048 MEF2BQ02080 365 aaPredicted RBP7.86□□□□□ -1.15
PRPF38A-202ENST00000474048 KLF5Q13887 457 aaPredicted RBP7.86□□□□□ -1.15
PRPF38A-202ENST00000474048 PDE6HQ13956 83 aa7.86□□□□□ -1.15
PRPF38A-202ENST00000474048 KRTAP24-1Q3LI83 254 aa7.86□□□□□ -1.15
PRPF38A-202ENST00000474048 MORN5Q5VZ52 161 aa7.86□□□□□ -1.15
PRPF38A-202ENST00000474048 SUN5Q8TC36 379 aa7.86□□□□□ -1.15
PRPF38A-202ENST00000474048 RXFP4Q8TDU9 374 aa7.86□□□□□ -1.15
PRPF38A-202ENST00000474048 SMDT1Q9H4I9 107 aa7.86□□□□□ -1.15
PRPF38A-202ENST00000474048 SMPXQ9UHP9 88 aa7.86□□□□□ -1.15
PRPF38A-202ENST00000474048 LOC102723971A0A1B0GUV8 181 aa7.85□□□□□ -1.15
PRPF38A-202ENST00000474048 A0A1W2PRE2 83 aa7.85□□□□□ -1.15
PRPF38A-202ENST00000474048 C2orf70A6NJV1 201 aa7.85□□□□□ -1.15
PRPF38A-202ENST00000474048 K7EQM0 130 aa7.85□□□□□ -1.15
PRPF38A-202ENST00000474048 DNASE2O00115 360 aaPredicted RBP7.85□□□□□ -1.15
PRPF38A-202ENST00000474048 RANP62826 216 aaKnown RBP7.85□□□□□ -1.15
PRPF38A-202ENST00000474048 CCL20P78556 96 aa7.85□□□□□ -1.15
PRPF38A-202ENST00000474048 ZNF506Q5JVG8 444 aa7.85□□□□□ -1.15
PRPF38A-202ENST00000474048 C16orf54Q6UWD8 224 aa7.85□□□□□ -1.15
PRPF38A-202ENST00000474048 RBPMS2Q6ZRY4 209 aaKnown RBP7.85□□□□□ -1.15
PRPF38A-202ENST00000474048 TCF24Q7RTU0 167 aa7.85□□□□□ -1.15
PRPF38A-202ENST00000474048 FAM167A-AS1Q96KT0 104 aa7.85□□□□□ -1.15
PRPF38A-202ENST00000474048 SLC50A1Q9BRV3 221 aa7.85□□□□□ -1.15
PRPF38A-202ENST00000474048 RPH3ALQ9UNE2 315 aa7.85□□□□□ -1.15
PRPF38A-202ENST00000474048 IGKV3-7A0A075B6H7 116 aa7.84□□□□□ -1.15
PRPF38A-202ENST00000474048 CHEK1O14757 476 aa7.84□□□□□ -1.15
PRPF38A-202ENST00000474048 SLC25A5P05141 298 aaKnown RBP7.84□□□□□ -1.15
PRPF38A-202ENST00000474048 FOLR2P14207 255 aa7.84□□□□□ -1.15
PRPF38A-202ENST00000474048 CBLN1P23435 193 aa7.84□□□□□ -1.15
PRPF38A-202ENST00000474048 ID1P41134 155 aa7.84□□□□□ -1.15
PRPF38A-202ENST00000474048 FHL3Q13643 280 aa7.84□□□□□ -1.15
PRPF38A-202ENST00000474048 PMS2P11Q13670 270 aa7.84□□□□□ -1.15
PRPF38A-202ENST00000474048 HIST2H2BDQ6DRA6 164 aa7.84□□□□□ -1.15
PRPF38A-202ENST00000474048 SHISA2Q6UWI4 295 aa7.84□□□□□ -1.15
PRPF38A-202ENST00000474048 LYPD1Q8N2G4 141 aa7.84□□□□□ -1.15
PRPF38A-202ENST00000474048 DLX4Q92988 240 aaPredicted RBP7.84□□□□□ -1.15
PRPF38A-202ENST00000474048 FXYD5Q96DB9 178 aa7.84□□□□□ -1.15
PRPF38A-202ENST00000474048 C16orf92Q96LL3 132 aa7.84□□□□□ -1.15
PRPF38A-202ENST00000474048 TCEAL7Q9BRU2 100 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms