RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 CACFD1Q9UGQ2 172 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 MLXQ9UH92 298 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 IL19Q9UHD0 177 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 RPUSD1Q9UJJ7 312 aaKnown RBP1.01□□□□□ -2.25
CCDC39-203ENST00000473854 NUP50Q9UKX7 468 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 CARHSP1Q9Y2V2 147 aaKnown RBP1.01□□□□□ -2.25
CCDC39-203ENST00000473854 KCNIP3Q9Y2W7 256 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 LINC00312Q9Y6C7 94 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 WSB1Q9Y6I7 421 aa1.01□□□□□ -2.25
CCDC39-203ENST00000473854 IGKV1D-37A0A075B6S9 117 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 PPIAL4EA0A075B759 164 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 IGHV2-26A0A0B4J1V2 119 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 IGHV3-72A0A0B4J1Y9 119 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 TRAV38-1A0A0B4J264 116 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 IGHV1-69-2A0A0G2JMI3 117 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 LOC105371267A0A1B0GV96 52 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 IGLC7A0M8Q6 106 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 TMEM218A2RU14 115 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 PSMB11A5LHX3 300 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 MAP1LC3B2A6NCE7 125 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 ZFP92A6NM28 416 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 RNF212BA8MTL3 300 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 ODF3BA8MYP8 253 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 SEC14L6B5MCN3 397 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 KRBOX1C9JBD0 128 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 PPIAL4DF5H284 164 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 F8W036 122 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 RNASEK-C17orf49H0YIS7 233 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 TOR1AO14656 332 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 TAAR5O14804 337 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 HMGB3O15347 200 aaKnown RBP1□□□□□ -2.25
CCDC39-203ENST00000473854 RBFOX2O43251 390 aaKnown RBP eCLIP1□□□□□ -2.25
CCDC39-203ENST00000473854 SYNGR2O43760 224 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 YIF1AO95070 293 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 GOSR1O95249 250 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 FSTL3O95633 263 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 HPRT1P00492 218 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 MOSP00540 346 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 KRASP01116 189 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 IGLV1-47P01700 117 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 IGHV2-5P01817 119 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 APOC3P02656 99 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 OPN1MWP04001 364 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 PRB1P04280 392 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 SERPINE2P07093 398 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 CRYGBP07316 175 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 SRP19P09132 144 aaKnown RBP1□□□□□ -2.25
CCDC39-203ENST00000473854 FBP1P09467 338 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 SFTA3P0C7M3 94 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 SEC11BP0C7V7 166 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 APELAP0DMC3 54 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 PPIAL4FP0DN26 164 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 OPN1MW2P0DN77 364 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 OPN1MW3P0DN78 364 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 OR13C7P0DN81 318 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 IGHV1-8P0DP01 117 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 RNASE2P10153 161 aaKnown RBP1□□□□□ -2.25
CCDC39-203ENST00000473854 BCL2P10415 239 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 NQO2P16083 231 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 FGF7P21781 194 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 COX7A1P24310 79 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 NPY1RP25929 384 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 SNCAP37840 140 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 KIR2DS2P43631 304 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 CAMLGP49069 296 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 PPOXP50336 477 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 MFAP2P55001 183 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 TAS2R30P59541 319 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 UBE2KP61086 200 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 RAB14P61106 215 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 RPL31P62899 125 aaKnown RBP1□□□□□ -2.25
CCDC39-203ENST00000473854 CXCL6P80162 114 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 MRPS11P82912 194 aaKnown RBP1□□□□□ -2.25
CCDC39-203ENST00000473854 PRCDQ00LT1 54 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 DEFA5Q01523 94 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 PAX2Q02962 417 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 WT1-ASQ06250 92 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 MEF2CQ06413 473 aaPredicted RBP1□□□□□ -2.25
CCDC39-203ENST00000473854 PJVKQ0ZLH3 352 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 CATR1Q13166 79 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 BTN1A1Q13410 526 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 KLF5Q13887 457 aaPredicted RBP1□□□□□ -2.25
CCDC39-203ENST00000473854 ZNF266Q14584 549 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 POU2AF1Q16633 256 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 GUK1Q16774 197 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 LRRC75BQ2VPJ9 315 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 HLA-DRB5Q30154 266 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 SPANXN5Q5MJ07 72 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 FAM71F2Q6NXP2 309 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 UQCC3Q6UW78 93 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 LCN15Q6UWW0 184 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 HEPN1Q6WQI6 88 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 ADAMTSL5Q6ZMM2 481 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 LHFPL4Q7Z7J7 247 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 STX12Q86Y82 276 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 DYNAPQ8N1N2 210 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 RPP25LQ8N5L8 163 aaKnown RBP1□□□□□ -2.25
CCDC39-203ENST00000473854 LINC00311Q8N616 119 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 CYB561D1Q8N8Q1 229 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 C8orf31Q8N9H6 132 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms