RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.93□□□□□ -0.66
VTI1A-203ENST00000472892 C1orf158Q8N1D5 194 aa10.93□□□□□ -0.66
VTI1A-203ENST00000472892 SMIM8Q96KF7 97 aa10.93□□□□□ -0.66
VTI1A-203ENST00000472892 SDHCQ99643 169 aaPredicted RBP10.93□□□□□ -0.66
VTI1A-203ENST00000472892 TMEM147Q9BVK8 224 aa10.93□□□□□ -0.66
VTI1A-203ENST00000472892 SCRT1Q9BWW7 348 aa10.93□□□□□ -0.66
VTI1A-203ENST00000472892 PSENENQ9NZ42 101 aa10.93□□□□□ -0.66
VTI1A-203ENST00000472892 DOK5Q9P104 306 aa10.93□□□□□ -0.66
VTI1A-203ENST00000472892 IFNA21P01568 189 aa10.92□□□□□ -0.66
VTI1A-203ENST00000472892 AMTNQ6UX39 209 aa10.92□□□□□ -0.66
VTI1A-203ENST00000472892 CYP2G1PQ6ZSU1 146 aa10.92□□□□□ -0.66
VTI1A-203ENST00000472892 NDUFAF3Q9BU61 184 aa10.92□□□□□ -0.66
VTI1A-203ENST00000472892 DKK2Q9UBU2 259 aa10.92□□□□□ -0.66
VTI1A-203ENST00000472892 GOLT1BQ9Y3E0 138 aa10.92□□□□□ -0.66
VTI1A-203ENST00000472892 TRAV8-2A0A0B4J237 113 aa10.91□□□□□ -0.66
VTI1A-203ENST00000472892 IL5P05113 134 aa10.91□□□□□ -0.66
VTI1A-203ENST00000472892 ANXA7P20073 488 aaKnown RBP10.91□□□□□ -0.66
VTI1A-203ENST00000472892 BTCP35070 178 aa10.91□□□□□ -0.66
VTI1A-203ENST00000472892 PLP1P60201 277 aa10.91□□□□□ -0.66
VTI1A-203ENST00000472892 TMEM14EPQ6UXP3 125 aa10.91□□□□□ -0.66
VTI1A-203ENST00000472892 SHANK2-AS3Q9BTD1 123 aa10.91□□□□□ -0.66
VTI1A-203ENST00000472892 SLC25A39Q9BZJ4 359 aaPredicted RBP10.91□□□□□ -0.66
VTI1A-203ENST00000472892 TEX48A0A1B0GUV7 120 aa10.9□□□□□ -0.66
VTI1A-203ENST00000472892 LINC00854A0A1B0GVQ3 168 aa10.9□□□□□ -0.66
VTI1A-203ENST00000472892 SMCO3A2RU48 225 aa10.9□□□□□ -0.66
VTI1A-203ENST00000472892 CENPXA8MT69 81 aa10.9□□□□□ -0.66
VTI1A-203ENST00000472892 H3BRN7 92 aa10.9□□□□□ -0.66
VTI1A-203ENST00000472892 SSSCA1O60232 199 aa10.9□□□□□ -0.66
VTI1A-203ENST00000472892 HYPMO75409 117 aa10.9□□□□□ -0.66
VTI1A-203ENST00000472892 HBE1P02100 147 aa10.9□□□□□ -0.66
VTI1A-203ENST00000472892 P0DMU3 169 aa10.9□□□□□ -0.66
VTI1A-203ENST00000472892 FAM231AP0DMU4 169 aa10.9□□□□□ -0.66
VTI1A-203ENST00000472892 FAM231CP0DMU5 169 aa10.9□□□□□ -0.66
VTI1A-203ENST00000472892 SELENOTP62341 195 aa10.9□□□□□ -0.66
VTI1A-203ENST00000472892 OXA1LQ15070 435 aa10.9□□□□□ -0.66
VTI1A-203ENST00000472892 C4orf46Q504U0 113 aa10.9□□□□□ -0.66
VTI1A-203ENST00000472892 FAM222AQ5U5X8 452 aa10.9□□□□□ -0.66
VTI1A-203ENST00000472892 IGFL4Q6B9Z1 124 aa10.9□□□□□ -0.66
VTI1A-203ENST00000472892 POM121L12Q8N7R1 296 aa10.9□□□□□ -0.66
VTI1A-203ENST00000472892 C7orf50Q9BRJ6 194 aaKnown RBP10.9□□□□□ -0.66
VTI1A-203ENST00000472892 NPVFQ9HCQ7 196 aa10.9□□□□□ -0.66
VTI1A-203ENST00000472892 HIGD1AQ9Y241 93 aa10.9□□□□□ -0.66
VTI1A-203ENST00000472892 FNDC10F2Z333 226 aa10.89□□□□□ -0.67
VTI1A-203ENST00000472892 CCNKO75909 580 aa10.89□□□□□ -0.67
VTI1A-203ENST00000472892 DUSP14O95147 198 aaKnown RBP10.89□□□□□ -0.67
VTI1A-203ENST00000472892 CNN1P51911 297 aaKnown RBP10.89□□□□□ -0.67
VTI1A-203ENST00000472892 TAS2R30P59541 319 aa10.89□□□□□ -0.67
VTI1A-203ENST00000472892 RAP2BP61225 183 aa10.89□□□□□ -0.67
VTI1A-203ENST00000472892 DLK1P80370 383 aa10.89□□□□□ -0.67
VTI1A-203ENST00000472892 CNPY1Q3B7I2 92 aa10.89□□□□□ -0.67
VTI1A-203ENST00000472892 FAM210BQ96KR6 192 aa10.89□□□□□ -0.67
VTI1A-203ENST00000472892 IGF2BP2-AS1Q96M15 143 aa10.89□□□□□ -0.67
VTI1A-203ENST00000472892 NIPSNAP3BQ9BS92 247 aa10.89□□□□□ -0.67
VTI1A-203ENST00000472892 HECTD4Q9Y4D8 3996 aa10.89□□□□□ -0.67
VTI1A-203ENST00000472892 LOC102723971A0A1B0GUV8 181 aa10.88□□□□□ -0.67
VTI1A-203ENST00000472892 K7EPK0 472 aa10.88□□□□□ -0.67
VTI1A-203ENST00000472892 METTL15P1P0C7V9 234 aa10.88□□□□□ -0.67
VTI1A-203ENST00000472892 LINC00869P0C866 280 aa10.88□□□□□ -0.67
VTI1A-203ENST00000472892 IL7P13232 177 aa10.88□□□□□ -0.67
VTI1A-203ENST00000472892 RPL7P18124 248 aaKnown RBP10.88□□□□□ -0.67
VTI1A-203ENST00000472892 RRN3P1Q2M238 152 aa10.88□□□□□ -0.67
VTI1A-203ENST00000472892 IAH1Q2TAA2 248 aaPredicted RBP10.88□□□□□ -0.67
VTI1A-203ENST00000472892 RNF182Q8N6D2 247 aa10.88□□□□□ -0.67
VTI1A-203ENST00000472892 OR11H7Q8NGC8 314 aa10.88□□□□□ -0.67
VTI1A-203ENST00000472892 OR10P1Q8NGE3 313 aa10.88□□□□□ -0.67
VTI1A-203ENST00000472892 MITD1Q8WV92 249 aa10.88□□□□□ -0.67
VTI1A-203ENST00000472892 YTHDF2Q9Y5A9 579 aaKnown RBP10.88□□□□□ -0.67
VTI1A-203ENST00000472892 HERC2O95714 4834 aa10.87□□□□□ -0.67
VTI1A-203ENST00000472892 CRXO43186 299 aaPredicted RBP10.87□□□□□ -0.67
VTI1A-203ENST00000472892 TSC22D2O75157 780 aa10.87□□□□□ -0.67
VTI1A-203ENST00000472892 OR5G3P0C626 314 aa10.87□□□□□ -0.67
VTI1A-203ENST00000472892 RRAS2P62070 204 aaPredicted RBP10.87□□□□□ -0.67
VTI1A-203ENST00000472892 FGL1Q08830 312 aa10.87□□□□□ -0.67
VTI1A-203ENST00000472892 PATE2Q6UY27 113 aa10.87□□□□□ -0.67
VTI1A-203ENST00000472892 ZBTB8BQ8NAP8 495 aaPredicted RBP10.87□□□□□ -0.67
VTI1A-203ENST00000472892 A0A087X0K7 114 aa10.86□□□□□ -0.67
VTI1A-203ENST00000472892 PLA2G10O15496 165 aa10.86□□□□□ -0.67
VTI1A-203ENST00000472892 TEPPQ6URK8 271 aa10.86□□□□□ -0.67
VTI1A-203ENST00000472892 LINC00336Q6ZUF6 198 aa10.86□□□□□ -0.67
VTI1A-203ENST00000472892 S100A7AQ86SG5 101 aa10.86□□□□□ -0.67
VTI1A-203ENST00000472892 UHRF2Q96PU4 802 aa10.86□□□□□ -0.67
VTI1A-203ENST00000472892 TMEM208Q9BTX3 173 aa10.86□□□□□ -0.67
VTI1A-203ENST00000472892 GGACTQ9BVM4 153 aa10.86□□□□□ -0.67
VTI1A-203ENST00000472892 GSKIPQ9P0R6 139 aa10.86□□□□□ -0.67
VTI1A-203ENST00000472892 RCL1Q9Y2P8 373 aaKnown RBP10.86□□□□□ -0.67
VTI1A-203ENST00000472892 DNAH2Q9P225 4427 aa10.85□□□□□ -0.67
VTI1A-203ENST00000472892 C7orf66A4D0T2 115 aa10.85□□□□□ -0.67
VTI1A-203ENST00000472892 A6NJY4 79 aa10.85□□□□□ -0.67
VTI1A-203ENST00000472892 M0R2Z0 102 aa10.85□□□□□ -0.67
VTI1A-203ENST00000472892 SCGB1D2O95969 90 aa10.85□□□□□ -0.67
VTI1A-203ENST00000472892 MBPP02686 304 aaPredicted RBP10.85□□□□□ -0.67
VTI1A-203ENST00000472892 CXCL3P19876 107 aa10.85□□□□□ -0.67
VTI1A-203ENST00000472892 LORP23490 312 aaPredicted RBP10.85□□□□□ -0.67
VTI1A-203ENST00000472892 B2MP61769 119 aa10.85□□□□□ -0.67
VTI1A-203ENST00000472892 ARL16Q0P5N6 197 aa10.85□□□□□ -0.67
VTI1A-203ENST00000472892 SPINK13Q1W4C9 94 aa10.85□□□□□ -0.67
VTI1A-203ENST00000472892 PXDC1Q5TGL8 231 aa10.85□□□□□ -0.67
VTI1A-203ENST00000472892 ARL6Q9H0F7 186 aa10.85□□□□□ -0.67
VTI1A-203ENST00000472892 MGAT4CQ9UBM8 478 aa10.85□□□□□ -0.67
VTI1A-203ENST00000472892 RNF24Q9Y225 148 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms