RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ATF4P18848 351 aaPredicted RBP12.77□□□□□ -0.37
CCM2-205ENST00000472223 GCSAMLQ5JQS6 135 aa12.77□□□□□ -0.37
CCM2-205ENST00000472223 TMED6Q8WW62 240 aa12.77□□□□□ -0.37
CCM2-205ENST00000472223 PHYHIPLQ96FC7 376 aa12.77□□□□□ -0.37
CCM2-205ENST00000472223 SCRT1Q9BWW7 348 aa12.77□□□□□ -0.37
CCM2-205ENST00000472223 MLXQ9UH92 298 aa12.77□□□□□ -0.37
CCM2-205ENST00000472223 RFNGQ9Y644 331 aa12.77□□□□□ -0.37
CCM2-205ENST00000472223 IGLV1-51P01701 117 aa12.76□□□□□ -0.37
CCM2-205ENST00000472223 EDN2P20800 178 aa12.76□□□□□ -0.37
CCM2-205ENST00000472223 CDC34P49427 236 aaPredicted RBP12.76□□□□□ -0.37
CCM2-205ENST00000472223 RAB5CP51148 216 aa12.76□□□□□ -0.37
CCM2-205ENST00000472223 RAB2AP61019 212 aa12.76□□□□□ -0.37
CCM2-205ENST00000472223 KHDC3LQ587J8 217 aa12.76□□□□□ -0.37
CCM2-205ENST00000472223 SEPSECSQ9HD40 501 aaKnown RBP12.76□□□□□ -0.37
CCM2-205ENST00000472223 BOLA1Q9Y3E2 137 aa12.76□□□□□ -0.37
CCM2-205ENST00000472223 ANK2Q01484 3957 aa12.75□□□□□ -0.37
CCM2-205ENST00000472223 MEOX2P50222 304 aa12.75□□□□□ -0.37
CCM2-205ENST00000472223 GUCA2BQ16661 112 aa12.75□□□□□ -0.37
CCM2-205ENST00000472223 CD300EQ496F6 205 aaPredicted RBP12.75□□□□□ -0.37
CCM2-205ENST00000472223 SAMD13Q5VXD3 122 aa12.75□□□□□ -0.37
CCM2-205ENST00000472223 LEMD1Q68G75 181 aa12.75□□□□□ -0.37
CCM2-205ENST00000472223 DPPA3Q6W0C5 159 aa12.75□□□□□ -0.37
CCM2-205ENST00000472223 ADAMTSL5Q6ZMM2 481 aa12.75□□□□□ -0.37
CCM2-205ENST00000472223 LRRC20Q8TCA0 184 aa12.75□□□□□ -0.37
CCM2-205ENST00000472223 RPRMQ9NS64 109 aa12.75□□□□□ -0.37
CCM2-205ENST00000472223 IGKV3-7A0A075B6H7 116 aa12.74□□□□□ -0.37
CCM2-205ENST00000472223 OR7C2O60412 319 aa12.74□□□□□ -0.37
CCM2-205ENST00000472223 MIR17HGQ75NE6 70 aa12.74□□□□□ -0.37
CCM2-205ENST00000472223 GLMPQ8WWB7 406 aa12.74□□□□□ -0.37
CCM2-205ENST00000472223 OR4C46A6NHA9 309 aa12.73□□□□□ -0.37
CCM2-205ENST00000472223 TEX46H3BTG2 121 aa12.73□□□□□ -0.37
CCM2-205ENST00000472223 TSPAN4O14817 238 aa12.73□□□□□ -0.37
CCM2-205ENST00000472223 PQLC2Q6ZP29 291 aa12.73□□□□□ -0.37
CCM2-205ENST00000472223 TMEM61Q8N0U2 210 aa12.73□□□□□ -0.37
CCM2-205ENST00000472223 SPAG8Q99932 426 aaPredicted RBP12.73□□□□□ -0.37
CCM2-205ENST00000472223 OR51M1Q9H341 326 aa12.73□□□□□ -0.37
CCM2-205ENST00000472223 SELENOKQ9Y6D0 94 aa12.73□□□□□ -0.37
CCM2-205ENST00000472223 VWFP04275 2813 aa12.72□□□□□ -0.37
CCM2-205ENST00000472223 TRAV5A0A0B4J249 113 aa12.72□□□□□ -0.37
CCM2-205ENST00000472223 CTXND1A0A1B0GTU2 59 aa12.72□□□□□ -0.37
CCM2-205ENST00000472223 CMC4P56277 68 aaPredicted RBP12.72□□□□□ -0.37
CCM2-205ENST00000472223 GUK1Q16774 197 aa12.72□□□□□ -0.37
CCM2-205ENST00000472223 OXLD1Q5BKU9 147 aa12.72□□□□□ -0.37
CCM2-205ENST00000472223 GBGT1Q8N5D6 347 aa12.72□□□□□ -0.37
CCM2-205ENST00000472223 RPP25LQ8N5L8 163 aaKnown RBP12.72□□□□□ -0.37
CCM2-205ENST00000472223 FAM213BQ8TBF2 198 aa12.72□□□□□ -0.37
CCM2-205ENST00000472223 RNF141Q8WVD5 230 aa12.72□□□□□ -0.37
CCM2-205ENST00000472223 RAB24Q969Q5 203 aa12.72□□□□□ -0.37
CCM2-205ENST00000472223 PAXXQ9BUH6 204 aa12.72□□□□□ -0.37
CCM2-205ENST00000472223 NRN1Q9NPD7 142 aa12.72□□□□□ -0.37
CCM2-205ENST00000472223 TMEM14CQ9P0S9 112 aa12.72□□□□□ -0.37
CCM2-205ENST00000472223 WIPF1O43516 503 aa12.71□□□□□ -0.37
CCM2-205ENST00000472223 CXorf1O96002 111 aa12.71□□□□□ -0.37
CCM2-205ENST00000472223 IFNA7P01567 189 aa12.71□□□□□ -0.37
CCM2-205ENST00000472223 ID1P41134 155 aa12.71□□□□□ -0.37
CCM2-205ENST00000472223 TFPI2P48307 235 aa12.71□□□□□ -0.37
CCM2-205ENST00000472223 SPATA31B1PQ5VZV4 182 aa12.71□□□□□ -0.37
CCM2-205ENST00000472223 FAM90A2PQ658T7 463 aa12.71□□□□□ -0.37
CCM2-205ENST00000472223 WFDC3Q8IUB2 231 aa12.71□□□□□ -0.37
CCM2-205ENST00000472223 MS4A6AQ9H2W1 248 aa12.71□□□□□ -0.37
CCM2-205ENST00000472223 TRAV2A0A0B4J234 112 aa12.7□□□□□ -0.38
CCM2-205ENST00000472223 HIST1H1EP10412 219 aaKnown RBP12.7□□□□□ -0.38
CCM2-205ENST00000472223 SULT1A2P50226 295 aa12.7□□□□□ -0.38
CCM2-205ENST00000472223 MORN5Q5VZ52 161 aa12.7□□□□□ -0.38
CCM2-205ENST00000472223 ALKAL2Q6UX46 152 aa12.7□□□□□ -0.38
CCM2-205ENST00000472223 GTSCR1Q86UQ5 136 aa12.7□□□□□ -0.38
CCM2-205ENST00000472223 IQCF2Q8IXL9 164 aa12.7□□□□□ -0.38
CCM2-205ENST00000472223 SLC25A2Q9BXI2 301 aa12.7□□□□□ -0.38
CCM2-205ENST00000472223 HMGB3O15347 200 aaKnown RBP12.69□□□□□ -0.38
CCM2-205ENST00000472223 H2AFB1P0C5Y9 115 aa12.69□□□□□ -0.38
CCM2-205ENST00000472223 STAG3L2P0CL84 134 aa12.69□□□□□ -0.38
CCM2-205ENST00000472223 STAG3L3P0CL85 134 aa12.69□□□□□ -0.38
CCM2-205ENST00000472223 GP9P14770 177 aa12.69□□□□□ -0.38
CCM2-205ENST00000472223 SNRPD3P62318 126 aaKnown RBP12.69□□□□□ -0.38
CCM2-205ENST00000472223 UBE2L3P68036 154 aaKnown RBP12.69□□□□□ -0.38
CCM2-205ENST00000472223 LCN15Q6UWW0 184 aa12.69□□□□□ -0.38
CCM2-205ENST00000472223 C16orf92Q96LL3 132 aa12.69□□□□□ -0.38
CCM2-205ENST00000472223 HRH4Q9H3N8 390 aa12.69□□□□□ -0.38
CCM2-205ENST00000472223 A0A087X0K7 114 aa12.68□□□□□ -0.38
CCM2-205ENST00000472223 MAP1LC3B2A6NCE7 125 aa12.68□□□□□ -0.38
CCM2-205ENST00000472223 ZNF705EA8MWA4 302 aaPredicted RBP12.68□□□□□ -0.38
CCM2-205ENST00000472223 SFT2D1Q8WV19 159 aa12.68□□□□□ -0.38
CCM2-205ENST00000472223 SLC50A1Q9BRV3 221 aa12.68□□□□□ -0.38
CCM2-205ENST00000472223 MAP1LC3BQ9GZQ8 125 aa12.68□□□□□ -0.38
CCM2-205ENST00000472223 TMEM167BQ9NRX6 74 aa12.68□□□□□ -0.38
CCM2-205ENST00000472223 ZNF256Q9Y2P7 627 aaPredicted RBP12.68□□□□□ -0.38
CCM2-205ENST00000472223 TRRAPQ9Y4A5 3859 aa12.67□□□□□ -0.38
CCM2-205ENST00000472223 IZUMO1RA6ND01 250 aa12.67□□□□□ -0.38
CCM2-205ENST00000472223 G3V4G9 280 aa12.67□□□□□ -0.38
CCM2-205ENST00000472223 HBE1P02100 147 aa12.67□□□□□ -0.38
CCM2-205ENST00000472223 OR10J4P0C629 311 aa12.67□□□□□ -0.38
CCM2-205ENST00000472223 NBEAP1P0C6P0 100 aa12.67□□□□□ -0.38
CCM2-205ENST00000472223 ARL14EPLP0DKL9 152 aa12.67□□□□□ -0.38
CCM2-205ENST00000472223 PYYP10082 97 aa12.67□□□□□ -0.38
CCM2-205ENST00000472223 BLOC1S1P78537 153 aa12.67□□□□□ -0.38
CCM2-205ENST00000472223 PSG9Q00887 426 aa12.67□□□□□ -0.38
CCM2-205ENST00000472223 SAMD5Q5TGI4 173 aa12.67□□□□□ -0.38
CCM2-205ENST00000472223 TEX261Q6UWH6 196 aa12.67□□□□□ -0.38
CCM2-205ENST00000472223 BLNKQ8WV28 456 aa12.67□□□□□ -0.38
CCM2-205ENST00000472223 FAM167A-AS1Q96KT0 104 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms