RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 APLNQ9ULZ1 77 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 RCL1Q9Y2P8 373 aaKnown RBP6.49□□□□□ -1.37
USF1-204ENST00000472217 IGHV3OR16-12A0A075B7B8 117 aa6.48□□□□□ -1.37
USF1-204ENST00000472217 CCSO14618 274 aa6.48□□□□□ -1.37
USF1-204ENST00000472217 LYRM1O43325 122 aa6.48□□□□□ -1.37
USF1-204ENST00000472217 MBPP02686 304 aaPredicted RBP6.48□□□□□ -1.37
USF1-204ENST00000472217 LINC00869P0C866 280 aa6.48□□□□□ -1.37
USF1-204ENST00000472217 PSG9Q00887 426 aa6.48□□□□□ -1.37
USF1-204ENST00000472217 C12orf74Q32Q52 190 aa6.48□□□□□ -1.37
USF1-204ENST00000472217 CNPY1Q3B7I2 92 aa6.48□□□□□ -1.37
USF1-204ENST00000472217 EBLN2Q6P2I7 272 aa6.48□□□□□ -1.37
USF1-204ENST00000472217 SHANK2-AS3Q9BTD1 123 aa6.48□□□□□ -1.37
USF1-204ENST00000472217 SLC25A39Q9BZJ4 359 aaPredicted RBP6.48□□□□□ -1.37
USF1-204ENST00000472217 NDUFA13Q9P0J0 144 aa6.48□□□□□ -1.37
USF1-204ENST00000472217 GSKIPQ9P0R6 139 aa6.48□□□□□ -1.37
USF1-204ENST00000472217 HIGD1AQ9Y241 93 aa6.48□□□□□ -1.37
USF1-204ENST00000472217 PLECQ15149 4684 aaKnown RBP6.47□□□□□ -1.37
USF1-204ENST00000472217 IGHV4-4A0A075B6R2 117 aa6.47□□□□□ -1.37
USF1-204ENST00000472217 TRAV8-2A0A0B4J237 113 aa6.47□□□□□ -1.37
USF1-204ENST00000472217 C7orf66A4D0T2 115 aa6.47□□□□□ -1.37
USF1-204ENST00000472217 A8MTW9 85 aa6.47□□□□□ -1.37
USF1-204ENST00000472217 FNDC10F2Z333 226 aa6.47□□□□□ -1.37
USF1-204ENST00000472217 TSC22D2O75157 780 aa6.47□□□□□ -1.37
USF1-204ENST00000472217 TCRBP04435 133 aa6.47□□□□□ -1.37
USF1-204ENST00000472217 S100A7P31151 101 aa6.47□□□□□ -1.37
USF1-204ENST00000472217 TAS2R30P59541 319 aa6.47□□□□□ -1.37
USF1-204ENST00000472217 RAP2BP61225 183 aa6.47□□□□□ -1.37
USF1-204ENST00000472217 SELENOTP62341 195 aa6.47□□□□□ -1.37
USF1-204ENST00000472217 IGFL4Q6B9Z1 124 aa6.47□□□□□ -1.37
USF1-204ENST00000472217 AMTNQ6UX39 209 aa6.47□□□□□ -1.37
USF1-204ENST00000472217 C1orf158Q8N1D5 194 aa6.47□□□□□ -1.37
USF1-204ENST00000472217 RNF182Q8N6D2 247 aa6.47□□□□□ -1.37
USF1-204ENST00000472217 OR10P1Q8NGE3 313 aa6.47□□□□□ -1.37
USF1-204ENST00000472217 UHRF2Q96PU4 802 aa6.47□□□□□ -1.37
USF1-204ENST00000472217 NPVFQ9HCQ7 196 aa6.47□□□□□ -1.37
USF1-204ENST00000472217 MGAT4CQ9UBM8 478 aa6.47□□□□□ -1.37
USF1-204ENST00000472217 RFNGQ9Y644 331 aa6.47□□□□□ -1.37
USF1-204ENST00000472217 BIRC6Q9NR09 4857 aa6.46□□□□□ -1.37
USF1-204ENST00000472217 TRAV6A0A075B6T7 132 aa6.46□□□□□ -1.38
USF1-204ENST00000472217 DEFB131BA0A096LNP1 70 aa6.46□□□□□ -1.38
USF1-204ENST00000472217 TMEM189A5PLL7 270 aa6.46□□□□□ -1.38
USF1-204ENST00000472217 SMIM9A6NGZ8 99 aa6.46□□□□□ -1.38
USF1-204ENST00000472217 K7EPK0 472 aa6.46□□□□□ -1.38
USF1-204ENST00000472217 HYPMO75409 117 aa6.46□□□□□ -1.38
USF1-204ENST00000472217 AMBPP02760 352 aa6.46□□□□□ -1.38
USF1-204ENST00000472217 OR5G3P0C626 314 aa6.46□□□□□ -1.38
USF1-204ENST00000472217 EMP1P54849 157 aa6.46□□□□□ -1.38
USF1-204ENST00000472217 PLP1P60201 277 aa6.46□□□□□ -1.38
USF1-204ENST00000472217 FGL1Q08830 312 aa6.46□□□□□ -1.38
USF1-204ENST00000472217 SLC38A11Q08AI6 406 aa6.46□□□□□ -1.38
USF1-204ENST00000472217 ARL16Q0P5N6 197 aa6.46□□□□□ -1.38
USF1-204ENST00000472217 ZNF846Q147U1 533 aa6.46□□□□□ -1.38
USF1-204ENST00000472217 TEPPQ6URK8 271 aa6.46□□□□□ -1.38
USF1-204ENST00000472217 PATE2Q6UY27 113 aa6.46□□□□□ -1.38
USF1-204ENST00000472217 SEC22CQ9BRL7 303 aa6.46□□□□□ -1.38
USF1-204ENST00000472217 RNF126Q9BV68 326 aa6.46□□□□□ -1.38
USF1-204ENST00000472217 ARL6Q9H0F7 186 aa6.46□□□□□ -1.38
USF1-204ENST00000472217 NUDT15Q9NV35 164 aa6.46□□□□□ -1.38
USF1-204ENST00000472217 FAM25EA8MYX2 175 aa6.45□□□□□ -1.38
USF1-204ENST00000472217 SPART-AS1P0CW21 52 aa6.45□□□□□ -1.38
USF1-204ENST00000472217 RPL7P18124 248 aaKnown RBP6.45□□□□□ -1.38
USF1-204ENST00000472217 CNN1P51911 297 aaKnown RBP6.45□□□□□ -1.38
USF1-204ENST00000472217 ZNF546Q86UE3 836 aa6.45□□□□□ -1.38
USF1-204ENST00000472217 OR11H7Q8NGC8 314 aa6.45□□□□□ -1.38
USF1-204ENST00000472217 ZNF431Q8TF32 576 aaPredicted RBP6.45□□□□□ -1.38
USF1-204ENST00000472217 IGF2BP2-AS1Q96M15 143 aa6.45□□□□□ -1.38
USF1-204ENST00000472217 CCDC32Q9BV29 185 aa6.45□□□□□ -1.38
USF1-204ENST00000472217 GGACTQ9BVM4 153 aa6.45□□□□□ -1.38
USF1-204ENST00000472217 ARV1Q9H2C2 271 aa6.45□□□□□ -1.38
USF1-204ENST00000472217 GOLT1BQ9Y3E0 138 aa6.45□□□□□ -1.38
USF1-204ENST00000472217 LSM5Q9Y4Y9 91 aaKnown RBP6.45□□□□□ -1.38
USF1-204ENST00000472217 A0A087X0K7 114 aa6.44□□□□□ -1.38
USF1-204ENST00000472217 LOC102723971A0A1B0GUV8 181 aa6.44□□□□□ -1.38
USF1-204ENST00000472217 C5orf51A6NDU8 294 aa6.44□□□□□ -1.38
USF1-204ENST00000472217 L7N2F9 121 aa6.44□□□□□ -1.38
USF1-204ENST00000472217 M0R2Z0 102 aa6.44□□□□□ -1.38
USF1-204ENST00000472217 GOSR2O14653 212 aa6.44□□□□□ -1.38
USF1-204ENST00000472217 AGPAT2O15120 278 aa6.44□□□□□ -1.38
USF1-204ENST00000472217 MRPS12O15235 138 aaKnown RBP6.44□□□□□ -1.38
USF1-204ENST00000472217 DUSP14O95147 198 aaKnown RBP6.44□□□□□ -1.38
USF1-204ENST00000472217 HBE1P02100 147 aa6.44□□□□□ -1.38
USF1-204ENST00000472217 CXCL3P19876 107 aa6.44□□□□□ -1.38
USF1-204ENST00000472217 CAV2P51636 162 aa6.44□□□□□ -1.38
USF1-204ENST00000472217 VAMP2P63027 116 aa6.44□□□□□ -1.38
USF1-204ENST00000472217 SPINK13Q1W4C9 94 aa6.44□□□□□ -1.38
USF1-204ENST00000472217 PXDC1Q5TGL8 231 aa6.44□□□□□ -1.38
USF1-204ENST00000472217 FAM222AQ5U5X8 452 aa6.44□□□□□ -1.38
USF1-204ENST00000472217 S100A7AQ86SG5 101 aa6.44□□□□□ -1.38
USF1-204ENST00000472217 C12orf45Q8N5I9 185 aaPredicted RBP6.44□□□□□ -1.38
USF1-204ENST00000472217 ZNF738Q8NE65 137 aa6.44□□□□□ -1.38
USF1-204ENST00000472217 MGST2Q99735 147 aa6.44□□□□□ -1.38
USF1-204ENST00000472217 C11orf1Q9H5F2 150 aa6.44□□□□□ -1.38
USF1-204ENST00000472217 DKK2Q9UBU2 259 aa6.44□□□□□ -1.38
USF1-204ENST00000472217 YTHDF2Q9Y5A9 579 aaKnown RBP6.44□□□□□ -1.38
USF1-204ENST00000472217 TEX48A0A1B0GUV7 120 aa6.43□□□□□ -1.38
USF1-204ENST00000472217 CRXO43186 299 aaPredicted RBP6.43□□□□□ -1.38
USF1-204ENST00000472217 H2AFB2P0C5Z0 115 aa6.43□□□□□ -1.38
USF1-204ENST00000472217 PRB4P10163 310 aaPredicted RBP6.43□□□□□ -1.38
USF1-204ENST00000472217 RRN3P1Q2M238 152 aa6.43□□□□□ -1.38
USF1-204ENST00000472217 MORN5Q5VZ52 161 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms