RNA–Protein interactions for RNA: ENST00000471842.1

LTA-215, Transcript of lymphotoxin alpha, humanhuman

TSL 2

Gene LTA, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-215ENST00000471842 ZNF90Q03938 601 aa9.62□□□□□ -0.87
LTA-215ENST00000471842 GAMTQ14353 236 aa9.62□□□□□ -0.87
LTA-215ENST00000471842 TRPT1Q86TN4 253 aaKnown RBP9.62□□□□□ -0.87
LTA-215ENST00000471842 SVBPQ8N300 66 aa9.62□□□□□ -0.87
LTA-215ENST00000471842 DCANP1Q8TF63 244 aa9.62□□□□□ -0.87
LTA-215ENST00000471842 PHLDA1Q8WV24 401 aaPredicted RBP9.62□□□□□ -0.87
LTA-215ENST00000471842 C14orf144Q96I85 54 aa9.62□□□□□ -0.87
LTA-215ENST00000471842 SLC25A21Q9BQT8 299 aaPredicted RBP9.62□□□□□ -0.87
LTA-215ENST00000471842 DUXBA0A1W2PPF3 345 aa9.61□□□□□ -0.87
LTA-215ENST00000471842 HSBP1L1C9JCN9 74 aa9.61□□□□□ -0.87
LTA-215ENST00000471842 SMLR1H3BR10 107 aa9.61□□□□□ -0.87
LTA-215ENST00000471842 LYRM1O43325 122 aa9.61□□□□□ -0.87
LTA-215ENST00000471842 RPP30P78346 268 aaKnown RBP9.61□□□□□ -0.87
LTA-215ENST00000471842 OPCMLQ14982 345 aa9.61□□□□□ -0.87
LTA-215ENST00000471842 MORN3Q6PF18 240 aaPredicted RBP9.61□□□□□ -0.87
LTA-215ENST00000471842 NRN1Q9NPD7 142 aa9.61□□□□□ -0.87
LTA-215ENST00000471842 NUDT15Q9NV35 164 aa9.61□□□□□ -0.87
LTA-215ENST00000471842 U3KQE9 123 aa9.61□□□□□ -0.87
LTA-215ENST00000471842 FAM90A26D6RGX4 464 aa9.6□□□□□ -0.87
LTA-215ENST00000471842 H3BP45 60 aa9.6□□□□□ -0.87
LTA-215ENST00000471842 MED6O75586 246 aa9.6□□□□□ -0.87
LTA-215ENST00000471842 LINC00614P0C842 121 aa9.6□□□□□ -0.87
LTA-215ENST00000471842 SPP1P10451 314 aa9.6□□□□□ -0.87
LTA-215ENST00000471842 CFAP161Q6P656 301 aa9.6□□□□□ -0.87
LTA-215ENST00000471842 ATRAIDQ6UW56 229 aa9.6□□□□□ -0.87
LTA-215ENST00000471842 GSG1LQ6UXU4 331 aa9.6□□□□□ -0.87
LTA-215ENST00000471842 RAB40CQ96S21 281 aa9.6□□□□□ -0.87
LTA-215ENST00000471842 MFFQ9GZY8 342 aa9.6□□□□□ -0.87
LTA-215ENST00000471842 C11orf68Q9H3H3 251 aaKnown RBP9.6□□□□□ -0.87
LTA-215ENST00000471842 TMED3Q9Y3Q3 217 aa9.6□□□□□ -0.87
LTA-215ENST00000471842 C1orf196B1AJZ1 125 aa9.59□□□□□ -0.87
LTA-215ENST00000471842 BUB3O43684 328 aa9.59□□□□□ -0.87
LTA-215ENST00000471842 IGKV3-20P01619 116 aa9.59□□□□□ -0.87
LTA-215ENST00000471842 FCN2Q15485 313 aa9.59□□□□□ -0.87
LTA-215ENST00000471842 GGNBP1Q5YKI7 109 aa9.59□□□□□ -0.87
LTA-215ENST00000471842 SLC25A32Q9H2D1 315 aa9.59□□□□□ -0.87
LTA-215ENST00000471842 DNAH1Q9P2D7 4330 aa9.59□□□□□ -0.87
LTA-215ENST00000471842 PLECQ15149 4684 aaKnown RBP9.59□□□□□ -0.87
LTA-215ENST00000471842 ALMS1Q8TCU4 4167 aa9.59□□□□□ -0.87
LTA-215ENST00000471842 IGHV4-28A0A0C4DH34 117 aa9.59□□□□□ -0.87
LTA-215ENST00000471842 SMCO3A2RU48 225 aa9.59□□□□□ -0.87
LTA-215ENST00000471842 SYNGR2O43760 224 aa9.59□□□□□ -0.87
LTA-215ENST00000471842 PITX3O75364 302 aa9.59□□□□□ -0.87
LTA-215ENST00000471842 ADAP1O75689 374 aa9.59□□□□□ -0.87
LTA-215ENST00000471842 CFDP00746 253 aaPredicted RBP9.59□□□□□ -0.87
LTA-215ENST00000471842 ATP5IP56385 69 aaPredicted RBP9.59□□□□□ -0.87
LTA-215ENST00000471842 AKR1C1Q04828 323 aa9.59□□□□□ -0.87
LTA-215ENST00000471842 SPANXN5Q5MJ07 72 aa9.59□□□□□ -0.87
LTA-215ENST00000471842 LRTM2Q8N967 370 aa9.59□□□□□ -0.87
LTA-215ENST00000471842 COQ8AQ8NI60 647 aa9.59□□□□□ -0.87
LTA-215ENST00000471842 CIB3Q96Q77 187 aaPredicted RBP9.59□□□□□ -0.87
LTA-215ENST00000471842 FLVCR2Q9UPI3 526 aa9.59□□□□□ -0.87
LTA-215ENST00000471842 IGKV1D-37A0A075B6S9 117 aa9.58□□□□□ -0.88
LTA-215ENST00000471842 SCGB1D2O95969 90 aa9.58□□□□□ -0.88
LTA-215ENST00000471842 SLC25A6P12236 298 aa9.58□□□□□ -0.88
LTA-215ENST00000471842 ANXA7P20073 488 aaKnown RBP9.58□□□□□ -0.88
LTA-215ENST00000471842 RAB5CP51148 216 aa9.58□□□□□ -0.88
LTA-215ENST00000471842 NUTF2P61970 127 aaKnown RBP9.58□□□□□ -0.88
LTA-215ENST00000471842 GAGE1Q13065 139 aa9.58□□□□□ -0.88
LTA-215ENST00000471842 TMEM41BQ5BJD5 291 aa9.58□□□□□ -0.88
LTA-215ENST00000471842 OR8G2PQ6IF36 304 aa9.58□□□□□ -0.88
LTA-215ENST00000471842 RAB24Q969Q5 203 aa9.58□□□□□ -0.88
LTA-215ENST00000471842 SLC25A22Q9H936 323 aa9.58□□□□□ -0.88
LTA-215ENST00000471842 XCL2Q9UBD3 114 aa9.58□□□□□ -0.88
LTA-215ENST00000471842 HYDINQ4G0P3 5121 aa9.57□□□□□ -0.88
LTA-215ENST00000471842 EPPK1P58107 5090 aaKnown RBP9.57□□□□□ -0.88
LTA-215ENST00000471842 SNRPGP15A8MWD9 76 aa9.57□□□□□ -0.88
LTA-215ENST00000471842 NDUFB6O95139 128 aa9.57□□□□□ -0.88
LTA-215ENST00000471842 GIG44P09565 113 aaPredicted RBP9.57□□□□□ -0.88
LTA-215ENST00000471842 FXYD7P58549 80 aa9.57□□□□□ -0.88
LTA-215ENST00000471842 DEFB1P60022 68 aa9.57□□□□□ -0.88
LTA-215ENST00000471842 PKIAP61925 76 aa9.57□□□□□ -0.88
LTA-215ENST00000471842 SNRPEP62304 92 aaKnown RBP9.57□□□□□ -0.88
LTA-215ENST00000471842 NHLH2Q02577 135 aa9.57□□□□□ -0.88
LTA-215ENST00000471842 OR8I2Q8N0Y5 310 aa9.57□□□□□ -0.88
LTA-215ENST00000471842 Q8NAQ8 132 aa9.57□□□□□ -0.88
LTA-215ENST00000471842 OR11H4Q8NGC9 324 aa9.57□□□□□ -0.88
LTA-215ENST00000471842 STRAPQ9Y3F4 350 aaKnown RBP9.57□□□□□ -0.88
LTA-215ENST00000471842 IGHV3OR16-12A0A075B7B8 117 aa9.56□□□□□ -0.88
LTA-215ENST00000471842 NAP1L6A6NFF2 107 aa9.56□□□□□ -0.88
LTA-215ENST00000471842 SSSCA1O60232 199 aa9.56□□□□□ -0.88
LTA-215ENST00000471842 IFNA21P01568 189 aa9.56□□□□□ -0.88
LTA-215ENST00000471842 OR4E1P0C645 316 aa9.56□□□□□ -0.88
LTA-215ENST00000471842 ORM2P19652 201 aa9.56□□□□□ -0.88
LTA-215ENST00000471842 ID1P41134 155 aa9.56□□□□□ -0.88
LTA-215ENST00000471842 MAJINQ3KP22 176 aa9.56□□□□□ -0.88
LTA-215ENST00000471842 ACOT7LQ6ZUV0 252 aa9.56□□□□□ -0.88
LTA-215ENST00000471842 OR4B1Q8NGF8 309 aa9.56□□□□□ -0.88
LTA-215ENST00000471842 TRGV9Q99603 122 aa9.56□□□□□ -0.88
LTA-215ENST00000471842 IGLL5B9A064 214 aa9.55□□□□□ -0.88
LTA-215ENST00000471842 TSTD3H0UI37 97 aa9.55□□□□□ -0.88
LTA-215ENST00000471842 RBMY1A1P0DJD3 496 aaKnown RBP9.55□□□□□ -0.88
LTA-215ENST00000471842 RBMY1CP0DJD4 496 aa9.55□□□□□ -0.88
LTA-215ENST00000471842 MIFP14174 115 aa9.55□□□□□ -0.88
LTA-215ENST00000471842 GATA2P23769 480 aaPredicted RBP9.55□□□□□ -0.88
LTA-215ENST00000471842 UBE2MP61081 183 aaKnown RBP9.55□□□□□ -0.88
LTA-215ENST00000471842 RBMY1FQ15415 496 aaKnown RBP9.55□□□□□ -0.88
LTA-215ENST00000471842 GDF5OSQ5U4N7 250 aa9.55□□□□□ -0.88
LTA-215ENST00000471842 OR11H7Q8NGC8 314 aa9.55□□□□□ -0.88
LTA-215ENST00000471842 OR1B1Q8NGR6 318 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms