RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 A8MWV9 139 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 C4orf51C9J302 202 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 UMAD1C9J7I0 102 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 LY6LH3BQJ8 138 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 LST1O00453 97 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 ZNF253O75346 499 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 IGLV3-27P01718 113 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 SLC25A5P05141 298 aaKnown RBP2.4□□□□□ -2.03
SCN3A-207ENST00000471697 ZNF286BP0CG31 522 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 SCGB1C2P0DMR2 95 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 SLC25A6P12236 298 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 FKBP2P26885 142 aaKnown RBP2.4□□□□□ -2.03
SCN3A-207ENST00000471697 CDKN2AP42771 156 aaKnown RBP2.4□□□□□ -2.03
SCN3A-207ENST00000471697 CRISP3P54108 245 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 LINC00313P59037 77 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 RPS11P62280 158 aaKnown RBP eCLIP2.4□□□□□ -2.03
SCN3A-207ENST00000471697 LSM3P62310 102 aaKnown RBP2.4□□□□□ -2.03
SCN3A-207ENST00000471697 GNB1P62873 340 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 CXCL6P80162 114 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 CDK5R1Q15078 307 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 C22orf39Q6P5X5 142 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 C9orf47Q6ZRZ4 202 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 TRAPPC6BQ86SZ2 158 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 MKXQ8IYA7 352 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 Q8NBF4 154 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 NPBQ8NG41 125 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 LMX1AQ8TE12 382 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 PPDPFLQ8WWR9 84 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 LYZL4Q96KX0 146 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 OR2A5Q96R48 311 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 TIMM17AQ99595 171 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 CCL13Q99616 98 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 FAM60AQ9NP50 221 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 C21orf62Q9NYP8 219 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 RPUSD1Q9UJJ7 312 aaKnown RBP2.4□□□□□ -2.03
SCN3A-207ENST00000471697 SPCS1Q9Y6A9 102 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 ABCC1P33527 1531 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.4□□□□□ -2.03
SCN3A-207ENST00000471697 ZNF142P52746 1687 aaPredicted RBP2.4□□□□□ -2.03
SCN3A-207ENST00000471697 PPRC1Q5VV67 1664 aaKnown RBP2.4□□□□□ -2.03
SCN3A-207ENST00000471697 DIP2CQ9Y2E4 1556 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 LAMC3Q9Y6N6 1575 aa2.4□□□□□ -2.03
SCN3A-207ENST00000471697 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.39□□□□□ -2.03
SCN3A-207ENST00000471697 PEAK1Q9H792 1746 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 DOCK1Q14185 1865 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 PLXNA4Q9HCM2 1894 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 LAMB1P07942 1786 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 KDM3BQ7LBC6 1761 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 RGPD4Q7Z3J3 1758 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 MEGF6O75095 1541 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 ATG2BQ96BY7 2078 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 PIK3C2AO00443 1686 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 TRAV9-1A0A075B6T8 112 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 FXYD6-FXYD2A0A087WZ82 144 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 A0A087X002 238 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 IGHV3-74A0A0B4J1X5 117 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 IGKV6-21A0A0C4DH24 114 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 IGHV1-58A0A0C4DH39 117 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 DPRXA6NFQ7 191 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 EPM2AB3EWF7 344 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 GABARAPH6UMI1 98 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 UBE2L6O14933 153 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 NDUFB3O43676 98 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 IGHV3-23P01764 117 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 RBP4P02753 201 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 MT-ATP8P03928 68 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 HLA-DPB1P04440 258 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 HSPB1P04792 205 aaKnown RBP2.39□□□□□ -2.03
SCN3A-207ENST00000471697 PATE4P0C8F1 98 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 TAS2R45P59539 299 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 FKBP1AP62942 108 aaKnown RBP2.39□□□□□ -2.03
SCN3A-207ENST00000471697 ELOCQ15369 112 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 C1orf140Q5VVS0 124 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 LYPD2Q6UXB3 125 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 AAED1Q7RTV5 226 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 MARCH3Q86UD3 253 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 SLC22A24Q8N4F4 322 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 RNF182Q8N6D2 247 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 OR5H2Q8NGV7 314 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 OR2T10Q8NGZ9 312 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 FAM57AQ8TBR7 257 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 MRPL30Q8TCC3 161 aaKnown RBP2.39□□□□□ -2.03
SCN3A-207ENST00000471697 ZNF721Q8TF20 911 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 GPX7Q96SL4 187 aaPredicted RBP2.39□□□□□ -2.03
SCN3A-207ENST00000471697 FXYD6Q9H0Q3 95 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 BCL2L10Q9HD36 194 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 ZNF492Q9P255 531 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 CKLFQ9UBR5 152 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 AMMECR1Q9Y4X0 333 aaPredicted RBP2.39□□□□□ -2.03
SCN3A-207ENST00000471697 ZNF706Q9Y5V0 76 aaPredicted RBP2.39□□□□□ -2.03
SCN3A-207ENST00000471697 SERP1Q9Y6X1 66 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 PXDNQ92626 1479 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 RAPGEF6Q8TEU7 1601 aa2.39□□□□□ -2.03
SCN3A-207ENST00000471697 EIF2AK4Q9P2K8 1649 aaKnown RBP2.39□□□□□ -2.03
SCN3A-207ENST00000471697 MAST2Q6P0Q8 1798 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 DSCAML1Q8TD84 2053 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 GCC2Q8IWJ2 1684 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 EML6Q6ZMW3 1958 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 CASP8AP2Q9UKL3 1982 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 NUMA1Q14980 2115 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms