RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 RPL19P84098 196 aaKnown RBP0.55□□□□□ -2.32
COPS3-206ENST00000471414 SPRNQ5BIV9 151 aa0.55□□□□□ -2.32
COPS3-206ENST00000471414 AKR1C8PQ5T2L2 129 aa0.55□□□□□ -2.32
COPS3-206ENST00000471414 ZNF833PQ6ZTB9 187 aa0.55□□□□□ -2.32
COPS3-206ENST00000471414 OR5D14Q8NGL3 314 aa0.55□□□□□ -2.32
COPS3-206ENST00000471414 LINC00052Q96N35 136 aa0.55□□□□□ -2.32
COPS3-206ENST00000471414 SH3BGRL3Q9H299 93 aa0.55□□□□□ -2.32
COPS3-206ENST00000471414 LYRM2Q9NU23 88 aaPredicted RBP0.55□□□□□ -2.32
COPS3-206ENST00000471414 TAS2R7Q9NYW3 318 aa0.55□□□□□ -2.32
COPS3-206ENST00000471414 ORMDL1Q9P0S3 153 aa0.55□□□□□ -2.32
COPS3-206ENST00000471414 UHRF1BP1Q6BDS2 1440 aa0.55□□□□□ -2.32
COPS3-206ENST00000471414 NCAPD3P42695 1498 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 CEP164Q9UPV0 1460 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 EML5Q05BV3 1969 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 TRPM1Q7Z4N2 1603 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 IGHV1-58A0A0C4DH39 117 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 B4DSR2 109 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 NUPR1O60356 82 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 DNAL4O96015 105 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 IFNA1P01562 189 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 APOA2P02652 100 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 CD2P06729 351 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 CRHP06850 196 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 OR10J4P0C629 311 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 PATE2Q6UY27 113 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 LINC00322Q6ZN03 302 aaPredicted RBP0.54□□□□□ -2.32
COPS3-206ENST00000471414 TMED4Q7Z7H5 227 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 OR13C6PQ8NH95 151 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 AP3S1Q92572 193 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 LYSMD1Q96S90 227 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 AMELYQ99218 206 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 PAIP2Q9BPZ3 127 aaKnown RBP0.54□□□□□ -2.32
COPS3-206ENST00000471414 GINS3Q9BRX5 216 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 TMEM70Q9BUB7 260 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 OR2J1Q9GZK6 312 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 PBOV1Q9GZY1 135 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 POPDC3Q9HBV1 291 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 TMEM14CQ9P0S9 112 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 SSR3Q9UNL2 185 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 N4BP2Q86UW6 1770 aaPredicted RBP0.54□□□□□ -2.32
COPS3-206ENST00000471414 PTPRFP10586 1907 aa0.54□□□□□ -2.32
COPS3-206ENST00000471414 HEATR1Q9H583 2144 aaKnown RBP0.53□□□□□ -2.32
COPS3-206ENST00000471414 A0A087WSZ3 146 aa0.53□□□□□ -2.32
COPS3-206ENST00000471414 RIIAD1A6NNX1 92 aa0.53□□□□□ -2.32
COPS3-206ENST00000471414 M0R233 179 aa0.53□□□□□ -2.32
COPS3-206ENST00000471414 ERC2-IT1O76042 136 aa0.53□□□□□ -2.32
COPS3-206ENST00000471414 IFNA14P01570 189 aa0.53□□□□□ -2.32
COPS3-206ENST00000471414 IGLV1-51P01701 117 aa0.53□□□□□ -2.32
COPS3-206ENST00000471414 INSL3P51460 131 aa0.53□□□□□ -2.32
COPS3-206ENST00000471414 CDK6Q00534 326 aa0.53□□□□□ -2.32
COPS3-206ENST00000471414 PSG9Q00887 426 aa0.53□□□□□ -2.32
COPS3-206ENST00000471414 POU6F1Q14863 301 aa0.53□□□□□ -2.32
COPS3-206ENST00000471414 C1orf134Q5TEV5 83 aa0.53□□□□□ -2.32
COPS3-206ENST00000471414 KRTAP26-1Q6PEX3 210 aa0.53□□□□□ -2.32
COPS3-206ENST00000471414 IFT20Q8IY31 132 aa0.53□□□□□ -2.32
COPS3-206ENST00000471414 OR5D16Q8NGK9 328 aa0.53□□□□□ -2.32
COPS3-206ENST00000471414 CDC26Q8NHZ8 85 aa0.53□□□□□ -2.32
COPS3-206ENST00000471414 POP5Q969H6 163 aaKnown RBP0.53□□□□□ -2.32
COPS3-206ENST00000471414 MUCL1Q96DR8 90 aa0.53□□□□□ -2.32
COPS3-206ENST00000471414 ZHX1-C8orf76Q96EF9 292 aa0.53□□□□□ -2.32
COPS3-206ENST00000471414 MALSU1Q96EH3 234 aa0.53□□□□□ -2.32
COPS3-206ENST00000471414 PBDC1Q9BVG4 233 aa0.53□□□□□ -2.32
COPS3-206ENST00000471414 SS18L2Q9UHA2 77 aa0.53□□□□□ -2.32
COPS3-206ENST00000471414 MYH3P11055 1940 aa0.53□□□□□ -2.32
COPS3-206ENST00000471414 COL1A1P02452 1464 aaPredicted RBP0.53□□□□□ -2.33
COPS3-206ENST00000471414 CECR2Q9BXF3 1484 aa0.53□□□□□ -2.33
COPS3-206ENST00000471414 NCR3O14931 201 aa0.52□□□□□ -2.33
COPS3-206ENST00000471414 TRGC2P03986 189 aa0.52□□□□□ -2.33
COPS3-206ENST00000471414 CXCL1P09341 107 aa0.52□□□□□ -2.33
COPS3-206ENST00000471414 OGNP20774 298 aaKnown RBP0.52□□□□□ -2.33
COPS3-206ENST00000471414 RAB5CP51148 216 aa0.52□□□□□ -2.33
COPS3-206ENST00000471414 ARPP19P56211 112 aa0.52□□□□□ -2.33
COPS3-206ENST00000471414 GNG3P63215 75 aa0.52□□□□□ -2.33
COPS3-206ENST00000471414 SNCBQ16143 134 aa0.52□□□□□ -2.33
COPS3-206ENST00000471414 GRINAQ7Z429 371 aa0.52□□□□□ -2.33
COPS3-206ENST00000471414 LYG2Q86SG7 212 aa0.52□□□□□ -2.33
COPS3-206ENST00000471414 PLPP5Q8NEB5 264 aa0.52□□□□□ -2.33
COPS3-206ENST00000471414 OR4K15Q8NH41 348 aa0.52□□□□□ -2.33
COPS3-206ENST00000471414 PPTC7Q8NI37 304 aa0.52□□□□□ -2.33
COPS3-206ENST00000471414 Q8TAT8 98 aa0.52□□□□□ -2.33
COPS3-206ENST00000471414 ZNF431Q8TF32 576 aaPredicted RBP0.52□□□□□ -2.33
COPS3-206ENST00000471414 RAB37Q96AX2 223 aa0.52□□□□□ -2.33
COPS3-206ENST00000471414 CHCHD1Q96BP2 118 aaKnown RBP0.52□□□□□ -2.33
COPS3-206ENST00000471414 ZNF714Q96N38 554 aa0.52□□□□□ -2.33
COPS3-206ENST00000471414 GPX7Q96SL4 187 aaPredicted RBP0.52□□□□□ -2.33
COPS3-206ENST00000471414 CD109Q6YHK3 1445 aa0.52□□□□□ -2.33
COPS3-206ENST00000471414 CAMSAP2Q08AD1 1489 aa0.52□□□□□ -2.33
COPS3-206ENST00000471414 PHRF1Q9P1Y6 1649 aaKnown RBP0.52□□□□□ -2.33
COPS3-206ENST00000471414 PIK3C2AO00443 1686 aa0.52□□□□□ -2.33
COPS3-206ENST00000471414 ADGBQ8N7X0 1667 aa0.52□□□□□ -2.33
COPS3-206ENST00000471414 COL24A1Q17RW2 1714 aa0.52□□□□□ -2.33
COPS3-206ENST00000471414 MGAMO43451 1857 aa0.52□□□□□ -2.33
COPS3-206ENST00000471414 CHD3Q12873 2000 aaKnown RBP0.52□□□□□ -2.33
COPS3-206ENST00000471414 IGLV3-32A0A0A0MS00 114 aa0.51□□□□□ -2.33
COPS3-206ENST00000471414 F8W1H4 67 aa0.51□□□□□ -2.33
COPS3-206ENST00000471414 H3BRM9 83 aa0.51□□□□□ -2.33
COPS3-206ENST00000471414 MFSD11O43934 449 aa0.51□□□□□ -2.33
COPS3-206ENST00000471414 KLF7O75840 302 aaPredicted RBP0.51□□□□□ -2.33
COPS3-206ENST00000471414 IFNA4P05014 189 aa0.51□□□□□ -2.33
COPS3-206ENST00000471414 CXCL8P10145 99 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms