RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 DAZ1Q9NQZ3 744 aaKnown RBP10.13□□□□□ -0.79
HMGN1-211ENST00000471260 RBMY1BA6NDE4 496 aaKnown RBP10.12□□□□□ -0.79
HMGN1-211ENST00000471260 RBMY1EA6NEQ0 496 aaKnown RBP10.12□□□□□ -0.79
HMGN1-211ENST00000471260 OR2T8A6NH00 312 aa10.12□□□□□ -0.79
HMGN1-211ENST00000471260 H3BQ15 152 aa10.12□□□□□ -0.79
HMGN1-211ENST00000471260 K7EIM0 57 aa10.12□□□□□ -0.79
HMGN1-211ENST00000471260 K7EMT4 169 aa10.12□□□□□ -0.79
HMGN1-211ENST00000471260 S100A9P06702 114 aaKnown RBP10.12□□□□□ -0.79
HMGN1-211ENST00000471260 RBMY1DP0C7P1 496 aaKnown RBP10.12□□□□□ -0.79
HMGN1-211ENST00000471260 FCGR2BP31994 310 aaPredicted RBP10.12□□□□□ -0.79
HMGN1-211ENST00000471260 MFAP2P55001 183 aa10.12□□□□□ -0.79
HMGN1-211ENST00000471260 PRCDQ00LT1 54 aa10.12□□□□□ -0.79
HMGN1-211ENST00000471260 SLC38A11Q08AI6 406 aa10.12□□□□□ -0.79
HMGN1-211ENST00000471260 AARDQ4LEZ3 155 aa10.12□□□□□ -0.79
HMGN1-211ENST00000471260 ZNF114Q8NC26 417 aa10.12□□□□□ -0.79
HMGN1-211ENST00000471260 C12orf57Q99622 126 aa10.12□□□□□ -0.79
HMGN1-211ENST00000471260 TXN2Q99757 166 aa10.12□□□□□ -0.79
HMGN1-211ENST00000471260 F8W735 103 aaPredicted RBP10.11□□□□□ -0.79
HMGN1-211ENST00000471260 RPL35P42766 123 aaKnown RBP10.11□□□□□ -0.79
HMGN1-211ENST00000471260 HSPE1P61604 102 aaKnown RBP10.11□□□□□ -0.79
HMGN1-211ENST00000471260 ERHP84090 104 aaKnown RBP10.11□□□□□ -0.79
HMGN1-211ENST00000471260 VWC2Q2TAL6 325 aa10.11□□□□□ -0.79
HMGN1-211ENST00000471260 IL17DQ8TAD2 202 aa10.11□□□□□ -0.79
HMGN1-211ENST00000471260 SPAG8Q99932 426 aaPredicted RBP10.11□□□□□ -0.79
HMGN1-211ENST00000471260 CTDSP1Q9GZU7 261 aa10.11□□□□□ -0.79
HMGN1-211ENST00000471260 MANBALQ9NQG1 85 aa10.11□□□□□ -0.79
HMGN1-211ENST00000471260 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.11□□□□□ -0.79
HMGN1-211ENST00000471260 VAX2Q9UIW0 290 aa10.11□□□□□ -0.79
HMGN1-211ENST00000471260 IGHV3-35A0A0C4DH35 117 aa10.1□□□□□ -0.79
HMGN1-211ENST00000471260 C15orf62A8K5M9 175 aa10.1□□□□□ -0.79
HMGN1-211ENST00000471260 INS-IGF2F8WCM5 200 aa10.1□□□□□ -0.79
HMGN1-211ENST00000471260 TMEM250H0YL14 139 aa10.1□□□□□ -0.79
HMGN1-211ENST00000471260 RND2P52198 227 aa10.1□□□□□ -0.79
HMGN1-211ENST00000471260 RELQ04864 619 aaPredicted RBP10.1□□□□□ -0.79
HMGN1-211ENST00000471260 Q56UQ5 140 aa10.1□□□□□ -0.79
HMGN1-211ENST00000471260 Q6ZRM9 215 aa10.1□□□□□ -0.79
HMGN1-211ENST00000471260 CYB561D1Q8N8Q1 229 aa10.1□□□□□ -0.79
HMGN1-211ENST00000471260 CHRDL1Q9BU40 450 aa10.1□□□□□ -0.79
HMGN1-211ENST00000471260 PUS1Q9Y606 427 aaKnown RBP eCLIP10.1□□□□□ -0.79
HMGN1-211ENST00000471260 CTXND1A0A1B0GTU2 59 aa10.09□□□□□ -0.79
HMGN1-211ENST00000471260 MAP1LC3B2A6NCE7 125 aa10.09□□□□□ -0.79
HMGN1-211ENST00000471260 H3BP45 60 aa10.09□□□□□ -0.79
HMGN1-211ENST00000471260 MPDU1O75352 247 aa10.09□□□□□ -0.79
HMGN1-211ENST00000471260 CTSGP08311 255 aa10.09□□□□□ -0.79
HMGN1-211ENST00000471260 METTL15P1P0C7V9 234 aa10.09□□□□□ -0.79
HMGN1-211ENST00000471260 IAPPP10997 89 aa10.09□□□□□ -0.79
HMGN1-211ENST00000471260 MFAP4P55083 255 aa10.09□□□□□ -0.79
HMGN1-211ENST00000471260 CCL20P78556 96 aa10.09□□□□□ -0.79
HMGN1-211ENST00000471260 FAM90A2PQ658T7 463 aa10.09□□□□□ -0.79
HMGN1-211ENST00000471260 C2CD4CQ8TF44 421 aa10.09□□□□□ -0.79
HMGN1-211ENST00000471260 RARRES2Q99969 163 aa10.09□□□□□ -0.79
HMGN1-211ENST00000471260 FAM110AQ9BQ89 295 aa10.09□□□□□ -0.79
HMGN1-211ENST00000471260 MAP1LC3BQ9GZQ8 125 aa10.09□□□□□ -0.79
HMGN1-211ENST00000471260 WFDC10AQ9H1F0 79 aa10.09□□□□□ -0.79
HMGN1-211ENST00000471260 RBKSQ9H477 322 aa10.09□□□□□ -0.79
HMGN1-211ENST00000471260 KCNIP2Q9NS61 270 aa10.09□□□□□ -0.79
HMGN1-211ENST00000471260 RPRMQ9NS64 109 aa10.09□□□□□ -0.79
HMGN1-211ENST00000471260 RYR3Q15413 4870 aa10.09□□□□□ -0.79
HMGN1-211ENST00000471260 LOC102724200A0A096LPH7 203 aaPredicted RBP10.08□□□□□ -0.8
HMGN1-211ENST00000471260 IGHV3-21A0A0B4J1V1 117 aa10.08□□□□□ -0.8
HMGN1-211ENST00000471260 C17orf112F2Z3M2 114 aa10.08□□□□□ -0.8
HMGN1-211ENST00000471260 I3L2K1 104 aa10.08□□□□□ -0.8
HMGN1-211ENST00000471260 ADMP35318 185 aa10.08□□□□□ -0.8
HMGN1-211ENST00000471260 RPP30P78346 268 aaKnown RBP10.08□□□□□ -0.8
HMGN1-211ENST00000471260 DLK1P80370 383 aa10.08□□□□□ -0.8
HMGN1-211ENST00000471260 FAM24BQ8N5W8 94 aa10.08□□□□□ -0.8
HMGN1-211ENST00000471260 OR52E5Q8NH55 327 aa10.08□□□□□ -0.8
HMGN1-211ENST00000471260 MISP3Q96FF7 219 aa10.08□□□□□ -0.8
HMGN1-211ENST00000471260 RSG1Q9BU20 258 aa10.08□□□□□ -0.8
HMGN1-211ENST00000471260 C20orf24Q9BUV8 137 aa10.08□□□□□ -0.8
HMGN1-211ENST00000471260 GGACTQ9BVM4 153 aa10.08□□□□□ -0.8
HMGN1-211ENST00000471260 GGTLC1Q9BX51 225 aa10.08□□□□□ -0.8
HMGN1-211ENST00000471260 GNG13Q9P2W3 67 aa10.08□□□□□ -0.8
HMGN1-211ENST00000471260 UBE2L5PA0A1B0GUS4 154 aa10.07□□□□□ -0.8
HMGN1-211ENST00000471260 EIF3GO75821 320 aaKnown RBP eCLIP10.07□□□□□ -0.8
HMGN1-211ENST00000471260 MT-CO2P00403 227 aa10.07□□□□□ -0.8
HMGN1-211ENST00000471260 AKR1C3P42330 323 aa10.07□□□□□ -0.8
HMGN1-211ENST00000471260 SNRPEP62304 92 aaKnown RBP10.07□□□□□ -0.8
HMGN1-211ENST00000471260 CTAG1AP78358 180 aa10.07□□□□□ -0.8
HMGN1-211ENST00000471260 SPANXN5Q5MJ07 72 aa10.07□□□□□ -0.8
HMGN1-211ENST00000471260 CYP2G1PQ6ZSU1 146 aa10.07□□□□□ -0.8
HMGN1-211ENST00000471260 ZFP82Q8N141 532 aa10.07□□□□□ -0.8
HMGN1-211ENST00000471260 OR10P1Q8NGE3 313 aa10.07□□□□□ -0.8
HMGN1-211ENST00000471260 DTD1Q8TEA8 209 aa10.07□□□□□ -0.8
HMGN1-211ENST00000471260 ISOC2Q96AB3 205 aa10.07□□□□□ -0.8
HMGN1-211ENST00000471260 TXNDC17Q9BRA2 123 aa10.07□□□□□ -0.8
HMGN1-211ENST00000471260 ELOA3CA0A087WX78 387 aaPredicted RBP10.06□□□□□ -0.8
HMGN1-211ENST00000471260 A0A1B0GV50 99 aa10.06□□□□□ -0.8
HMGN1-211ENST00000471260 SMCO3A2RU48 225 aa10.06□□□□□ -0.8
HMGN1-211ENST00000471260 OR4C46A6NHA9 309 aa10.06□□□□□ -0.8
HMGN1-211ENST00000471260 CORTO00230 105 aa10.06□□□□□ -0.8
HMGN1-211ENST00000471260 GNG7O60262 68 aa10.06□□□□□ -0.8
HMGN1-211ENST00000471260 NXPH3O95157 252 aa10.06□□□□□ -0.8
HMGN1-211ENST00000471260 SUB1P53999 127 aaKnown RBP eCLIP10.06□□□□□ -0.8
HMGN1-211ENST00000471260 CMC4P56277 68 aaPredicted RBP10.06□□□□□ -0.8
HMGN1-211ENST00000471260 MEF2BQ02080 365 aaPredicted RBP10.06□□□□□ -0.8
HMGN1-211ENST00000471260 ARL16Q0P5N6 197 aa10.06□□□□□ -0.8
HMGN1-211ENST00000471260 ELOBQ15370 118 aa10.06□□□□□ -0.8
HMGN1-211ENST00000471260 ZNF726P1Q15940 193 aa10.06□□□□□ -0.8
HMGN1-211ENST00000471260 DNLZQ5SXM8 178 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms