RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 BPIFB6Q8NFQ5 453 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 OR4B1Q8NGF8 309 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 C11orf1Q9H5F2 150 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 KLK12Q9UKR0 248 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 LINC00588Q9Y4M8 146 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 HSPE1-MOB4S4R3N1 261 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 CRB1P82279 1406 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 NSD3Q9BZ95 1437 aa2.93□□□□□ -1.94
PRPF40A-206ENST00000471167 ZNF638Q14966 1978 aaKnown RBP2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 KDM5CP41229 1560 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 ADGRL2O95490 1459 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 ECM29Q5VYK3 1845 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 PHIPQ8WWQ0 1821 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 WNK3Q9BYP7 1800 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 TMEM223A0PJW6 202 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 A8MWP4 228 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 SLC25A20O43772 301 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 IGKV1D-33P01593 117 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 IGKV1-33P01594 117 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 IGHV1-46P01743 117 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 IGHV3-7P01780 117 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 TRGC1P0CF51 173 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 SLC25A16P16260 332 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 AKR1C1Q04828 323 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 TMEM155Q4W5P6 130 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 C10orf91Q5T1B1 145 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 ZNF705AQ6ZN79 300 aaPredicted RBP2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 FOXI2Q6ZQN5 318 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 C7orf65Q6ZTY9 151 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 ATOH7Q8N100 152 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 LINC00471Q8N535 108 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 COPS9Q8WXC6 57 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 SCGB3A1Q96QR1 104 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 NAA60Q9H7X0 242 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 ZNF443Q9Y2A4 671 aaPredicted RBP2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 BCORL1Q5H9F3 1711 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 KIAA1551Q9HCM1 1747 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 RGS12O14924 1447 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 TROQ12816 1431 aaPredicted RBP2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 YEATS2Q9ULM3 1422 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 MAST2Q6P0Q8 1798 aa2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 N4BP2Q86UW6 1770 aaPredicted RBP2.92□□□□□ -1.94
PRPF40A-206ENST00000471167 MYH7BA7E2Y1 1941 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 TRAV12-2A0A075B6T6 113 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 SPRR5A0A1B0GTR4 108 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 A6NDX4 124 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 C11orf94C9JXX5 98 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 RER1O15258 196 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 SYNGR2O43760 224 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 HBDP02042 147 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 GZMBP10144 247 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 IFITM1P13164 125 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 LINC00315P59091 139 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 UBA52P62987 128 aaKnown RBP2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 PYY3Q5JQD4 70 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 CLLU1Q5K131 121 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 SOSTDC1Q6X4U4 206 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 ZFP2Q6ZN57 461 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 C16orf47Q6ZP98 133 aaPredicted RBP2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 SVBPQ8N300 66 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 SIGLECL1Q8N7X8 197 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 CNEP1R1Q8N9A8 125 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 Q8N9W7 124 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 RBMXL1Q96E39 390 aaKnown RBP2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 PRO1933Q9H354 126 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 C16orf95Q9H693 158 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 ZNRD1Q9P1U0 126 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 ZNF222Q9UK12 451 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 AKAP11Q9UKA4 1901 aa2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 MED1Q15648 1581 aaPredicted RBP2.91□□□□□ -1.94
PRPF40A-206ENST00000471167 DSCAMO60469 2012 aa2.9□□□□□ -1.94
PRPF40A-206ENST00000471167 KTN1Q86UP2 1357 aaKnown RBP2.9□□□□□ -1.94
PRPF40A-206ENST00000471167 MAPKBP1O60336 1514 aa2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 PIK3C2AO00443 1686 aa2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 IGHV3-64DA0A0J9YX35 117 aa2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 GEMIN2O14893 280 aaKnown RBP2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 LECT2O14960 151 aa2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 SH2D1AO60880 128 aa2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 IGHV1-69P01742 117 aa2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 FOXA1P55317 472 aa2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 ZNF90Q03938 601 aa2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 C9orf153Q5TBE3 101 aa2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 LINC01545Q5VT33 79 aa2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 NOXRED1Q6NXP6 359 aa2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 ZNF322Q6U7Q0 402 aaPredicted RBP2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 SLC35E3Q7Z769 313 aa2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 LINC01560Q8TB33 94 aa2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 MCEEQ96PE7 176 aa2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 UPK3BQ9BT76 320 aa2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 SEC11CQ9BY50 192 aa2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 AGPAT4-IT1Q9H0P7 198 aa2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 FKBP11Q9NYL4 201 aa2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 NOP16Q9Y3C1 178 aaKnown RBP2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 DNAJC15Q9Y5T4 150 aa2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 TMEM14AQ9Y6G1 99 aa2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 CHCHD2Q9Y6H1 151 aaPredicted RBP2.9□□□□□ -1.95
PRPF40A-206ENST00000471167 LRP4O75096 1905 aa2.89□□□□□ -1.95
PRPF40A-206ENST00000471167 DLC1Q96QB1 1528 aa2.89□□□□□ -1.95
PRPF40A-206ENST00000471167 EML6Q6ZMW3 1958 aa2.89□□□□□ -1.95
PRPF40A-206ENST00000471167 TRBV20-1A0A075B6N2 111 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms