RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 GATA2P23769 480 aaPredicted RBP6.78□□□□□ -1.32
SF3A1-206ENST00000471037 S100A7P31151 101 aa6.78□□□□□ -1.32
SF3A1-206ENST00000471037 SULT1A2P50226 295 aa6.78□□□□□ -1.32
SF3A1-206ENST00000471037 ELLP55199 621 aaPredicted RBP6.78□□□□□ -1.32
SF3A1-206ENST00000471037 LYZP61626 148 aa6.78□□□□□ -1.32
SF3A1-206ENST00000471037 TMEM41BQ5BJD5 291 aa6.78□□□□□ -1.32
SF3A1-206ENST00000471037 ALKAL2Q6UX46 152 aa6.78□□□□□ -1.32
SF3A1-206ENST00000471037 DPPA3Q6W0C5 159 aa6.78□□□□□ -1.32
SF3A1-206ENST00000471037 TMEM182Q6ZP80 229 aaPredicted RBP6.78□□□□□ -1.32
SF3A1-206ENST00000471037 ZNF767PQ75MW2 155 aa6.78□□□□□ -1.32
SF3A1-206ENST00000471037 S100A7AQ86SG5 101 aa6.78□□□□□ -1.32
SF3A1-206ENST00000471037 GPHB5Q86YW7 130 aa6.78□□□□□ -1.32
SF3A1-206ENST00000471037 DYNLRB2Q8TF09 96 aa6.78□□□□□ -1.32
SF3A1-206ENST00000471037 GATAD1Q8WUU5 269 aa6.78□□□□□ -1.32
SF3A1-206ENST00000471037 RNF125Q96EQ8 232 aa6.78□□□□□ -1.32
SF3A1-206ENST00000471037 RNF2Q99496 336 aa6.78□□□□□ -1.32
SF3A1-206ENST00000471037 WFDC10AQ9H1F0 79 aa6.78□□□□□ -1.32
SF3A1-206ENST00000471037 TECRQ9NZ01 308 aaKnown RBP6.78□□□□□ -1.32
SF3A1-206ENST00000471037 UBQLN2Q9UHD9 624 aa6.78□□□□□ -1.32
SF3A1-206ENST00000471037 PUS1Q9Y606 427 aaKnown RBP eCLIP6.78□□□□□ -1.32
SF3A1-206ENST00000471037 RFNGQ9Y644 331 aa6.78□□□□□ -1.32
SF3A1-206ENST00000471037 C2orf70A6NJV1 201 aa6.77□□□□□ -1.33
SF3A1-206ENST00000471037 LGALS9O00182 355 aa6.77□□□□□ -1.33
SF3A1-206ENST00000471037 COX7A2P2O60397 106 aa6.77□□□□□ -1.33
SF3A1-206ENST00000471037 HYPMO75409 117 aa6.77□□□□□ -1.33
SF3A1-206ENST00000471037 RAB2AP61019 212 aa6.77□□□□□ -1.33
SF3A1-206ENST00000471037 IFITM2Q01629 132 aa6.77□□□□□ -1.33
SF3A1-206ENST00000471037 FAM106AQ4KMX7 169 aa6.77□□□□□ -1.33
SF3A1-206ENST00000471037 TOMM20LQ6UXN7 152 aa6.77□□□□□ -1.33
SF3A1-206ENST00000471037 OR1B1Q8NGR6 318 aa6.77□□□□□ -1.33
SF3A1-206ENST00000471037 LRRC20Q8TCA0 184 aa6.77□□□□□ -1.33
SF3A1-206ENST00000471037 RNF141Q8WVD5 230 aa6.77□□□□□ -1.33
SF3A1-206ENST00000471037 TMEM190Q8WZ59 177 aa6.77□□□□□ -1.33
SF3A1-206ENST00000471037 ZNF414Q96IQ9 312 aa6.77□□□□□ -1.33
SF3A1-206ENST00000471037 KRTAP17-1Q9BYP8 105 aa6.77□□□□□ -1.33
SF3A1-206ENST00000471037 ZFAND3Q9H8U3 227 aa6.77□□□□□ -1.33
SF3A1-206ENST00000471037 DNAJC4Q9NNZ3 241 aa6.77□□□□□ -1.33
SF3A1-206ENST00000471037 RPRMQ9NS64 109 aa6.77□□□□□ -1.33
SF3A1-206ENST00000471037 PFDN2Q9UHV9 154 aa6.77□□□□□ -1.33
SF3A1-206ENST00000471037 RNF24Q9Y225 148 aa6.77□□□□□ -1.33
SF3A1-206ENST00000471037 IGHV3-35A0A0C4DH35 117 aa6.76□□□□□ -1.33
SF3A1-206ENST00000471037 OR5G3P0C626 314 aa6.76□□□□□ -1.33
SF3A1-206ENST00000471037 FOLR2P14207 255 aa6.76□□□□□ -1.33
SF3A1-206ENST00000471037 ORM2P19652 201 aa6.76□□□□□ -1.33
SF3A1-206ENST00000471037 RHOBP62745 196 aa6.76□□□□□ -1.33
SF3A1-206ENST00000471037 USF2Q15853 346 aaPredicted RBP6.76□□□□□ -1.33
SF3A1-206ENST00000471037 GUCA2BQ16661 112 aa6.76□□□□□ -1.33
SF3A1-206ENST00000471037 GCSAMLQ5JQS6 135 aa6.76□□□□□ -1.33
SF3A1-206ENST00000471037 FAM74A1Q5RGS3 127 aa6.76□□□□□ -1.33
SF3A1-206ENST00000471037 C10orf113Q5VZT2 155 aa6.76□□□□□ -1.33
SF3A1-206ENST00000471037 OR10G4Q8NGN3 311 aa6.76□□□□□ -1.33
SF3A1-206ENST00000471037 OR10G9Q8NGN4 311 aa6.76□□□□□ -1.33
SF3A1-206ENST00000471037 OR10G7Q8NGN6 311 aa6.76□□□□□ -1.33
SF3A1-206ENST00000471037 SAT2Q96F10 170 aaPredicted RBP6.76□□□□□ -1.33
SF3A1-206ENST00000471037 METTL26Q96S19 204 aa6.76□□□□□ -1.33
SF3A1-206ENST00000471037 OVOL2Q9BRP0 275 aa6.76□□□□□ -1.33
SF3A1-206ENST00000471037 PBDC1Q9BVG4 233 aa6.76□□□□□ -1.33
SF3A1-206ENST00000471037 MRPL32Q9BYC8 188 aaKnown RBP6.76□□□□□ -1.33
SF3A1-206ENST00000471037 ACTR3CQ9C0K3 210 aaPredicted RBP6.76□□□□□ -1.33
SF3A1-206ENST00000471037 PLA2G2EQ9NZK7 142 aa6.76□□□□□ -1.33
SF3A1-206ENST00000471037 MRPL27Q9P0M9 148 aaKnown RBP6.76□□□□□ -1.33
SF3A1-206ENST00000471037 DOK5Q9P104 306 aa6.76□□□□□ -1.33
SF3A1-206ENST00000471037 RABAC1Q9UI14 185 aa6.76□□□□□ -1.33
SF3A1-206ENST00000471037 HIGD1AQ9Y241 93 aa6.76□□□□□ -1.33
SF3A1-206ENST00000471037 CTXND1A0A1B0GTU2 59 aa6.75□□□□□ -1.33
SF3A1-206ENST00000471037 A0A1W2PPV4 95 aa6.75□□□□□ -1.33
SF3A1-206ENST00000471037 NUPR2A6NF83 97 aa6.75□□□□□ -1.33
SF3A1-206ENST00000471037 ZNF705EA8MWA4 302 aaPredicted RBP6.75□□□□□ -1.33
SF3A1-206ENST00000471037 A8MWP6 167 aa6.75□□□□□ -1.33
SF3A1-206ENST00000471037 K7EMT4 169 aa6.75□□□□□ -1.33
SF3A1-206ENST00000471037 RGS13O14921 159 aa6.75□□□□□ -1.33
SF3A1-206ENST00000471037 EDN2P20800 178 aa6.75□□□□□ -1.33
SF3A1-206ENST00000471037 CDC34P49427 236 aaPredicted RBP6.75□□□□□ -1.33
SF3A1-206ENST00000471037 TAS2R45P59539 299 aa6.75□□□□□ -1.33
SF3A1-206ENST00000471037 FAM78BQ5VT40 261 aa6.75□□□□□ -1.33
SF3A1-206ENST00000471037 FAM122CQ6P4D5 195 aa6.75□□□□□ -1.33
SF3A1-206ENST00000471037 PATE2Q6UY27 113 aa6.75□□□□□ -1.33
SF3A1-206ENST00000471037 TMEM61Q8N0U2 210 aa6.75□□□□□ -1.33
SF3A1-206ENST00000471037 RPP25LQ8N5L8 163 aaKnown RBP6.75□□□□□ -1.33
SF3A1-206ENST00000471037 FAM213BQ8TBF2 198 aa6.75□□□□□ -1.33
SF3A1-206ENST00000471037 TMEM37Q8WXS4 190 aa6.75□□□□□ -1.33
SF3A1-206ENST00000471037 NARS2Q96I59 477 aaKnown RBP6.75□□□□□ -1.33
SF3A1-206ENST00000471037 C20orf24Q9BUV8 137 aa6.75□□□□□ -1.33
SF3A1-206ENST00000471037 VSIRQ9H7M9 311 aa6.75□□□□□ -1.33
SF3A1-206ENST00000471037 DAZ1Q9NQZ3 744 aaKnown RBP6.75□□□□□ -1.33
SF3A1-206ENST00000471037 FUT9Q9Y231 359 aa6.75□□□□□ -1.33
SF3A1-206ENST00000471037 UFC1Q9Y3C8 167 aa6.75□□□□□ -1.33
SF3A1-206ENST00000471037 LOC102724200A0A096LPH7 203 aaPredicted RBP6.74□□□□□ -1.33
SF3A1-206ENST00000471037 A0A1W2PS18 150 aa6.74□□□□□ -1.33
SF3A1-206ENST00000471037 ZNF320A2RRD8 509 aa6.74□□□□□ -1.33
SF3A1-206ENST00000471037 TMEM213A2RRL7 107 aa6.74□□□□□ -1.33
SF3A1-206ENST00000471037 H3BRN7 92 aa6.74□□□□□ -1.33
SF3A1-206ENST00000471037 TEX46H3BTG2 121 aa6.74□□□□□ -1.33
SF3A1-206ENST00000471037 LY6G6CO95867 125 aa6.74□□□□□ -1.33
SF3A1-206ENST00000471037 CBLN1P23435 193 aa6.74□□□□□ -1.33
SF3A1-206ENST00000471037 NPPCP23582 126 aa6.74□□□□□ -1.33
SF3A1-206ENST00000471037 CRYBB3P26998 211 aa6.74□□□□□ -1.33
SF3A1-206ENST00000471037 BMI1P35226 326 aa6.74□□□□□ -1.33
SF3A1-206ENST00000471037 RAB14P61106 215 aa6.74□□□□□ -1.33
SF3A1-206ENST00000471037 BLOC1S1P78537 153 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms