RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 REC114Q7Z4M0 266 aa7.49□□□□□ -1.21
CCM2-204ENST00000470837 LYPD6BQ8NI32 183 aa7.49□□□□□ -1.21
CCM2-204ENST00000470837 SLC25A2Q9BXI2 301 aa7.49□□□□□ -1.21
CCM2-204ENST00000470837 MED9Q9NWA0 146 aa7.49□□□□□ -1.21
CCM2-204ENST00000470837 TMEM14CQ9P0S9 112 aa7.49□□□□□ -1.21
CCM2-204ENST00000470837 ANK3Q12955 4377 aaKnown RBP7.48□□□□□ -1.21
CCM2-204ENST00000470837 IGHV3-49A0A0A0MS15 119 aa7.48□□□□□ -1.21
CCM2-204ENST00000470837 IGHV3-66A0A0C4DH42 116 aa7.48□□□□□ -1.21
CCM2-204ENST00000470837 IGHV7-4-1A0A0J9YVY3 117 aa7.48□□□□□ -1.21
CCM2-204ENST00000470837 HELTA6NFD8 242 aa7.48□□□□□ -1.21
CCM2-204ENST00000470837 RBFOX3A6NFN3 312 aa7.48□□□□□ -1.21
CCM2-204ENST00000470837 MYCNOSP40205 109 aa7.48□□□□□ -1.21
CCM2-204ENST00000470837 MEOX2P50222 304 aa7.48□□□□□ -1.21
CCM2-204ENST00000470837 SLURP1P55000 103 aa7.48□□□□□ -1.21
CCM2-204ENST00000470837 RPL11P62913 178 aaKnown RBP7.48□□□□□ -1.21
CCM2-204ENST00000470837 KLF5Q13887 457 aaPredicted RBP7.48□□□□□ -1.21
CCM2-204ENST00000470837 GUK1Q16774 197 aa7.48□□□□□ -1.21
CCM2-204ENST00000470837 HAGHQ16775 308 aa7.48□□□□□ -1.21
CCM2-204ENST00000470837 TM4SF20Q53R12 229 aa7.48□□□□□ -1.21
CCM2-204ENST00000470837 TOR2AQ5JU69 321 aa7.48□□□□□ -1.21
CCM2-204ENST00000470837 CST9LP1Q5W188 147 aa7.48□□□□□ -1.21
CCM2-204ENST00000470837 RAX2Q96IS3 184 aa7.48□□□□□ -1.21
CCM2-204ENST00000470837 NKX6-2Q9C056 277 aaPredicted RBP7.48□□□□□ -1.21
CCM2-204ENST00000470837 TREM1Q9NP99 234 aa7.48□□□□□ -1.21
CCM2-204ENST00000470837 IGHV3OR16-13A0A075B7E8 117 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 IGHV3-74A0A0B4J1X5 117 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 A8MWP6 167 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 BUB3O43684 328 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 CD5P06127 495 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 NBEAP1P0C6P0 100 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 PYYP10082 97 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 HIST1H1EP10412 219 aaKnown RBP7.47□□□□□ -1.21
CCM2-204ENST00000470837 BCL2P10415 239 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 UBE2G2P60604 165 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 CCL20P78556 96 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 KRTAP24-1Q3LI83 254 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 MORN5Q5VZ52 161 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 UQCC3Q6UW78 93 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 C12orf54Q6X4T0 127 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 C3orf56Q8N813 242 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 OR9G4Q8NGQ1 327 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 DYNLRB2Q8TF09 96 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 BLNKQ8WV28 456 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 FAM167A-AS1Q96KT0 104 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 FAM210AQ96ND0 272 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 DUX3Q96PT4 197 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 TXNDC17Q9BRA2 123 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 RHPN1-AS1Q9BWJ2 59 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 TMPRSS5Q9H3S3 457 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 SMPXQ9UHP9 88 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 VAX2Q9UIW0 290 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 ARL2-SNX15V9GYD0 113 aa7.47□□□□□ -1.21
CCM2-204ENST00000470837 JMJD1CQ15652 2540 aa7.46□□□□□ -1.21
CCM2-204ENST00000470837 C11orf94C9JXX5 98 aa7.46□□□□□ -1.22
CCM2-204ENST00000470837 OVOL1O14753 267 aa7.46□□□□□ -1.22
CCM2-204ENST00000470837 PAGE4O60829 102 aa7.46□□□□□ -1.22
CCM2-204ENST00000470837 GP9P14770 177 aa7.46□□□□□ -1.22
CCM2-204ENST00000470837 PMS2P11Q13670 270 aa7.46□□□□□ -1.22
CCM2-204ENST00000470837 SIGLEC15Q6ZMC9 328 aa7.46□□□□□ -1.22
CCM2-204ENST00000470837 SUN5Q8TC36 379 aa7.46□□□□□ -1.22
CCM2-204ENST00000470837 CITED4Q96RK1 184 aa7.46□□□□□ -1.22
CCM2-204ENST00000470837 SMDT1Q9H4I9 107 aa7.46□□□□□ -1.22
CCM2-204ENST00000470837 AAMDCQ9H7C9 122 aa7.46□□□□□ -1.22
CCM2-204ENST00000470837 A0A1W2PRE2 83 aa7.45□□□□□ -1.22
CCM2-204ENST00000470837 C2orf70A6NJV1 201 aa7.45□□□□□ -1.22
CCM2-204ENST00000470837 F6UZH7 168 aa7.45□□□□□ -1.22
CCM2-204ENST00000470837 PDE6DO43924 150 aa7.45□□□□□ -1.22
CCM2-204ENST00000470837 APOHP02749 345 aaPredicted RBP7.45□□□□□ -1.22
CCM2-204ENST00000470837 CBLN1P23435 193 aa7.45□□□□□ -1.22
CCM2-204ENST00000470837 RANP62826 216 aaKnown RBP7.45□□□□□ -1.22
CCM2-204ENST00000470837 PAFAH1B2P68402 229 aa7.45□□□□□ -1.22
CCM2-204ENST00000470837 PSG9Q00887 426 aa7.45□□□□□ -1.22
CCM2-204ENST00000470837 MEF2BQ02080 365 aaPredicted RBP7.45□□□□□ -1.22
CCM2-204ENST00000470837 FHL3Q13643 280 aa7.45□□□□□ -1.22
CCM2-204ENST00000470837 PDE6HQ13956 83 aa7.45□□□□□ -1.22
CCM2-204ENST00000470837 ZNF506Q5JVG8 444 aa7.45□□□□□ -1.22
CCM2-204ENST00000470837 SAMD13Q5VXD3 122 aa7.45□□□□□ -1.22
CCM2-204ENST00000470837 HIST2H2BDQ6DRA6 164 aa7.45□□□□□ -1.22
CCM2-204ENST00000470837 C16orf54Q6UWD8 224 aa7.45□□□□□ -1.22
CCM2-204ENST00000470837 PRIMA1Q86XR5 153 aa7.45□□□□□ -1.22
CCM2-204ENST00000470837 SLC7A5P1Q8MH63 180 aa7.45□□□□□ -1.22
CCM2-204ENST00000470837 CMTM2Q8TAZ6 248 aa7.45□□□□□ -1.22
CCM2-204ENST00000470837 RXFP4Q8TDU9 374 aa7.45□□□□□ -1.22
CCM2-204ENST00000470837 DLX4Q92988 240 aaPredicted RBP7.45□□□□□ -1.22
CCM2-204ENST00000470837 FXYD5Q96DB9 178 aa7.45□□□□□ -1.22
CCM2-204ENST00000470837 U3KQE9 123 aa7.45□□□□□ -1.22
CCM2-204ENST00000470837 NIPBLQ6KC79 2804 aaeCLIP7.45□□□□□ -1.22
CCM2-204ENST00000470837 ZFHX3Q15911 3703 aa7.44□□□□□ -1.22
CCM2-204ENST00000470837 C2CD3Q4AC94 2353 aa7.44□□□□□ -1.22
CCM2-204ENST00000470837 TRBV19A0A075B6N1 114 aa7.44□□□□□ -1.22
CCM2-204ENST00000470837 LOC102723971A0A1B0GUV8 181 aa7.44□□□□□ -1.22
CCM2-204ENST00000470837 TMEM213A2RRL7 107 aa7.44□□□□□ -1.22
CCM2-204ENST00000470837 DNASE2O00115 360 aaPredicted RBP7.44□□□□□ -1.22
CCM2-204ENST00000470837 CHEK1O14757 476 aa7.44□□□□□ -1.22
CCM2-204ENST00000470837 SNRPCP09234 159 aaKnown RBP7.44□□□□□ -1.22
CCM2-204ENST00000470837 FOLR2P14207 255 aa7.44□□□□□ -1.22
CCM2-204ENST00000470837 CSN1S1P47710 185 aa7.44□□□□□ -1.22
CCM2-204ENST00000470837 CEBPGP53567 150 aa7.44□□□□□ -1.22
CCM2-204ENST00000470837 KRTAP10-3P60369 221 aa7.44□□□□□ -1.22
CCM2-204ENST00000470837 SHISA2Q6UWI4 295 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms