RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 TMED4Q7Z7H5 227 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 C8orf59Q8N0T1 100 aaPredicted RBP3.52□□□□□ -1.85
PTPN4-209ENST00000469511 RNF182Q8N6D2 247 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 SLC35G3Q8N808 338 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 TSPAN14Q8NG11 270 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 OR1S2Q8NGQ3 325 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 PRSS3P2Q8NHM4 247 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 COQ8AQ8NI60 647 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 ABHD1Q96SE0 405 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 LINC01587Q99440 93 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 TSC22D3Q99576 134 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 MGLLQ99685 303 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 PBDC1Q9BVG4 233 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 PARD6GQ9BYG4 376 aaPredicted RBP3.52□□□□□ -1.85
PTPN4-209ENST00000469511 KRTAP4-9Q9BYQ8 210 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 AUNIPQ9H7T9 357 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 DOK5Q9P104 306 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 DAPK2Q9UIK4 370 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 TNXBP22105 4242 aa3.51□□□□□ -1.85
PTPN4-209ENST00000469511 IGKV1D-37A0A075B6S9 117 aa3.51□□□□□ -1.85
PTPN4-209ENST00000469511 TRAV30A0A087WSZ9 112 aa3.51□□□□□ -1.85
PTPN4-209ENST00000469511 INS-IGF2F8WCM5 200 aa3.51□□□□□ -1.85
PTPN4-209ENST00000469511 PDCD5O14737 125 aa3.51□□□□□ -1.85
PTPN4-209ENST00000469511 TOMM40O96008 361 aa3.51□□□□□ -1.85
PTPN4-209ENST00000469511 INSP01308 110 aa3.51□□□□□ -1.85
PTPN4-209ENST00000469511 RD3LP0DJH9 198 aa3.51□□□□□ -1.85
PTPN4-209ENST00000469511 ID1P41134 155 aa3.51□□□□□ -1.85
PTPN4-209ENST00000469511 TAS2R20P59543 309 aa3.51□□□□□ -1.85
PTPN4-209ENST00000469511 ZNF90Q03938 601 aa3.51□□□□□ -1.85
PTPN4-209ENST00000469511 MLLT11Q13015 90 aaPredicted RBP3.51□□□□□ -1.85
PTPN4-209ENST00000469511 TRAM1Q15629 374 aa3.51□□□□□ -1.85
PTPN4-209ENST00000469511 Q6ZSA8 131 aa3.51□□□□□ -1.85
PTPN4-209ENST00000469511 Q6ZTI0 123 aa3.51□□□□□ -1.85
PTPN4-209ENST00000469511 RNASE8Q8TDE3 154 aaKnown RBP3.51□□□□□ -1.85
PTPN4-209ENST00000469511 ACY3Q96HD9 319 aa3.51□□□□□ -1.85
PTPN4-209ENST00000469511 DUSP21Q9H596 190 aa3.51□□□□□ -1.85
PTPN4-209ENST00000469511 RHBDL2Q9NX52 303 aa3.51□□□□□ -1.85
PTPN4-209ENST00000469511 TIMM8BQ9Y5J9 83 aaPredicted RBP3.51□□□□□ -1.85
PTPN4-209ENST00000469511 TRDV1A0A1B0GX56 115 aa3.5□□□□□ -1.85
PTPN4-209ENST00000469511 CORTO00230 105 aa3.5□□□□□ -1.85
PTPN4-209ENST00000469511 HOXB5P09067 269 aa3.5□□□□□ -1.85
PTPN4-209ENST00000469511 PSMA1P25786 263 aaKnown RBP3.5□□□□□ -1.85
PTPN4-209ENST00000469511 HSPA13P48723 471 aa3.5□□□□□ -1.85
PTPN4-209ENST00000469511 OR2F1Q13607 317 aa3.5□□□□□ -1.85
PTPN4-209ENST00000469511 SP6Q3SY56 376 aa3.5□□□□□ -1.85
PTPN4-209ENST00000469511 CFAP161Q6P656 301 aa3.5□□□□□ -1.85
PTPN4-209ENST00000469511 LYPD5Q6UWN5 251 aa3.5□□□□□ -1.85
PTPN4-209ENST00000469511 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.5□□□□□ -1.85
PTPN4-209ENST00000469511 SCXQ7RTU7 201 aa3.5□□□□□ -1.85
PTPN4-209ENST00000469511 WFDC10BQ8IUB3 73 aa3.5□□□□□ -1.85
PTPN4-209ENST00000469511 TP53RKQ96S44 253 aa3.5□□□□□ -1.85
PTPN4-209ENST00000469511 RSG1Q9BU20 258 aa3.5□□□□□ -1.85
PTPN4-209ENST00000469511 CCDC90BQ9GZT6 254 aa3.5□□□□□ -1.85
PTPN4-209ENST00000469511 ACOT13Q9NPJ3 140 aa3.5□□□□□ -1.85
PTPN4-209ENST00000469511 RPRMQ9NS64 109 aa3.5□□□□□ -1.85
PTPN4-209ENST00000469511 RRP15Q9Y3B9 282 aaKnown RBP3.5□□□□□ -1.85
PTPN4-209ENST00000469511 USP17L23D6RBM5 183 aa3.49□□□□□ -1.85
PTPN4-209ENST00000469511 H3BNG1 76 aa3.49□□□□□ -1.85
PTPN4-209ENST00000469511 ISLRO14498 428 aa3.49□□□□□ -1.85
PTPN4-209ENST00000469511 PAGE4O60829 102 aa3.49□□□□□ -1.85
PTPN4-209ENST00000469511 CCNKO75909 580 aa3.49□□□□□ -1.85
PTPN4-209ENST00000469511 ATP5HO75947 161 aa3.49□□□□□ -1.85
PTPN4-209ENST00000469511 MYL9P24844 172 aa3.49□□□□□ -1.85
PTPN4-209ENST00000469511 HLA-DMAP28067 261 aa3.49□□□□□ -1.85
PTPN4-209ENST00000469511 SUB1P53999 127 aaKnown RBP eCLIP3.49□□□□□ -1.85
PTPN4-209ENST00000469511 TAS2R60P59551 318 aa3.49□□□□□ -1.85
PTPN4-209ENST00000469511 LYZP61626 148 aa3.49□□□□□ -1.85
PTPN4-209ENST00000469511 MXD1Q05195 221 aa3.49□□□□□ -1.85
PTPN4-209ENST00000469511 SPATA31B1PQ5VZV4 182 aa3.49□□□□□ -1.85
PTPN4-209ENST00000469511 TMEM182Q6ZP80 229 aaPredicted RBP3.49□□□□□ -1.85
PTPN4-209ENST00000469511 TMEM144Q7Z5S9 345 aa3.49□□□□□ -1.85
PTPN4-209ENST00000469511 CMTM1Q8IZ96 169 aa3.49□□□□□ -1.85
PTPN4-209ENST00000469511 Q8N814 137 aa3.49□□□□□ -1.85
PTPN4-209ENST00000469511 C16orf74Q96GX8 76 aa3.49□□□□□ -1.85
PTPN4-209ENST00000469511 TXNL4BQ9NX01 149 aaKnown RBP3.49□□□□□ -1.85
PTPN4-209ENST00000469511 ANAPC10Q9UM13 185 aa3.49□□□□□ -1.85
PTPN4-209ENST00000469511 IGKV1OR2-108A0A075B7D4 117 aa3.48□□□□□ -1.85
PTPN4-209ENST00000469511 BOLA2-SMG1P6H3BVE0 249 aa3.48□□□□□ -1.85
PTPN4-209ENST00000469511 IGLV2-8P01709 118 aa3.48□□□□□ -1.85
PTPN4-209ENST00000469511 IGHV3-53P01767 116 aa3.48□□□□□ -1.85
PTPN4-209ENST00000469511 SNRPCP09234 159 aaKnown RBP3.48□□□□□ -1.85
PTPN4-209ENST00000469511 GATA2P23769 480 aaPredicted RBP3.48□□□□□ -1.85
PTPN4-209ENST00000469511 HRH1P35367 487 aa3.48□□□□□ -1.85
PTPN4-209ENST00000469511 HTR2BP41595 481 aa3.48□□□□□ -1.85
PTPN4-209ENST00000469511 SUPT4H1P63272 117 aaKnown RBP3.48□□□□□ -1.85
PTPN4-209ENST00000469511 HIST1H1AQ02539 215 aaPredicted RBP3.48□□□□□ -1.85
PTPN4-209ENST00000469511 FGL1Q08830 312 aa3.48□□□□□ -1.85
PTPN4-209ENST00000469511 MEF2DQ14814 521 aa3.48□□□□□ -1.85
PTPN4-209ENST00000469511 C2orf83Q53S99 150 aa3.48□□□□□ -1.85
PTPN4-209ENST00000469511 IDNKQ5T6J7 187 aa3.48□□□□□ -1.85
PTPN4-209ENST00000469511 SFXN4Q6P4A7 337 aa3.48□□□□□ -1.85
PTPN4-209ENST00000469511 GPR141Q7Z602 305 aa3.48□□□□□ -1.85
PTPN4-209ENST00000469511 NFE4Q86UQ8 179 aa3.48□□□□□ -1.85
PTPN4-209ENST00000469511 OR8I2Q8N0Y5 310 aa3.48□□□□□ -1.85
PTPN4-209ENST00000469511 OR5H2Q8NGV7 314 aa3.48□□□□□ -1.85
PTPN4-209ENST00000469511 OR10J6PQ8NGY7 276 aa3.48□□□□□ -1.85
PTPN4-209ENST00000469511 LHFPL5Q8TAF8 219 aa3.48□□□□□ -1.85
PTPN4-209ENST00000469511 TMEM263Q8WUH6 116 aaKnown RBP3.48□□□□□ -1.85
PTPN4-209ENST00000469511 TMEM18Q96B42 140 aa3.48□□□□□ -1.85
PTPN4-209ENST00000469511 SLC25A22Q9H936 323 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms