RNA–Protein interactions for RNA: ENST00000469506.3

TRAK1-207, Transcript of trafficking kinesin protein 1, humanhuman

TSL 2

Gene TRAK1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-207ENST00000469506 SLC25A6P12236 298 aa13.22□□□□□ -0.29
TRAK1-207ENST00000469506 MEOX2P50222 304 aa13.22□□□□□ -0.29
TRAK1-207ENST00000469506 GGNBP1Q5YKI7 109 aa13.22□□□□□ -0.29
TRAK1-207ENST00000469506 BAP18Q8IXM2 172 aa13.22□□□□□ -0.29
TRAK1-207ENST00000469506 SLC45A2Q9UMX9 530 aa13.22□□□□□ -0.29
TRAK1-207ENST00000469506 LRP1BQ9NZR2 4599 aa13.22□□□□□ -0.29
TRAK1-207ENST00000469506 TRAV12-2A0A075B6T6 113 aa13.21□□□□□ -0.29
TRAK1-207ENST00000469506 H3BP45 60 aa13.21□□□□□ -0.29
TRAK1-207ENST00000469506 VAMP1P23763 118 aa13.21□□□□□ -0.29
TRAK1-207ENST00000469506 TMBIM6P55061 237 aa13.21□□□□□ -0.29
TRAK1-207ENST00000469506 TNP2Q05952 138 aa13.21□□□□□ -0.29
TRAK1-207ENST00000469506 PPP1R1AQ13522 171 aa13.21□□□□□ -0.29
TRAK1-207ENST00000469506 OR4D5Q8NGN0 318 aa13.21□□□□□ -0.29
TRAK1-207ENST00000469506 TMEM208Q9BTX3 173 aa13.21□□□□□ -0.29
TRAK1-207ENST00000469506 H3BMQ9 156 aa13.2□□□□□ -0.3
TRAK1-207ENST00000469506 H3BRN7 92 aa13.2□□□□□ -0.3
TRAK1-207ENST00000469506 SFT2D2O95562 160 aa13.2□□□□□ -0.3
TRAK1-207ENST00000469506 HOXB5P09067 269 aa13.2□□□□□ -0.3
TRAK1-207ENST00000469506 SPANXN5Q5MJ07 72 aa13.2□□□□□ -0.3
TRAK1-207ENST00000469506 OR1B1Q8NGR6 318 aa13.2□□□□□ -0.3
TRAK1-207ENST00000469506 SLC25A39Q9BZJ4 359 aaPredicted RBP13.2□□□□□ -0.3
TRAK1-207ENST00000469506 CFDP00746 253 aaPredicted RBP13.19□□□□□ -0.3
TRAK1-207ENST00000469506 DEFB130BP0DP73 79 aa13.19□□□□□ -0.3
TRAK1-207ENST00000469506 DEFB130AP0DP74 79 aa13.19□□□□□ -0.3
TRAK1-207ENST00000469506 SAMD13Q5VXD3 122 aa13.19□□□□□ -0.3
TRAK1-207ENST00000469506 ACOT7LQ6ZUV0 252 aa13.19□□□□□ -0.3
TRAK1-207ENST00000469506 BPIFCQ8NFQ6 507 aa13.19□□□□□ -0.3
TRAK1-207ENST00000469506 TMED3Q9Y3Q3 217 aa13.19□□□□□ -0.3
TRAK1-207ENST00000469506 V9GYH0 126 aa13.19□□□□□ -0.3
TRAK1-207ENST00000469506 PMS2P5A8MQ11 134 aa13.18□□□□□ -0.3
TRAK1-207ENST00000469506 MED6O75586 246 aa13.18□□□□□ -0.3
TRAK1-207ENST00000469506 CCNKO75909 580 aa13.18□□□□□ -0.3
TRAK1-207ENST00000469506 DUSP14O95147 198 aaKnown RBP13.18□□□□□ -0.3
TRAK1-207ENST00000469506 FGL1Q08830 312 aa13.18□□□□□ -0.3
TRAK1-207ENST00000469506 C15orf53Q8NAA6 179 aa13.18□□□□□ -0.3
TRAK1-207ENST00000469506 ZNRF2Q8NHG8 242 aa13.18□□□□□ -0.3
TRAK1-207ENST00000469506 MCFD2Q8NI22 146 aa13.18□□□□□ -0.3
TRAK1-207ENST00000469506 CIB3Q96Q77 187 aaPredicted RBP13.18□□□□□ -0.3
TRAK1-207ENST00000469506 BCL7BQ9BQE9 202 aa13.18□□□□□ -0.3
TRAK1-207ENST00000469506 SHANK2-AS3Q9BTD1 123 aa13.18□□□□□ -0.3
TRAK1-207ENST00000469506 TMEM147Q9BVK8 224 aa13.18□□□□□ -0.3
TRAK1-207ENST00000469506 LYRM9A8MSI8 78 aa13.17□□□□□ -0.3
TRAK1-207ENST00000469506 INSP01308 110 aa13.17□□□□□ -0.3
TRAK1-207ENST00000469506 AKR1C1Q04828 323 aa13.17□□□□□ -0.3
TRAK1-207ENST00000469506 SOHLH1Q5JUK2 328 aa13.17□□□□□ -0.3
TRAK1-207ENST00000469506 CYP2G1PQ6ZSU1 146 aa13.17□□□□□ -0.3
TRAK1-207ENST00000469506 TMEM144Q7Z5S9 345 aa13.17□□□□□ -0.3
TRAK1-207ENST00000469506 TOMM5Q8N4H5 51 aa13.17□□□□□ -0.3
TRAK1-207ENST00000469506 UHRF2Q96PU4 802 aa13.17□□□□□ -0.3
TRAK1-207ENST00000469506 ADAP1O75689 374 aa13.16□□□□□ -0.3
TRAK1-207ENST00000469506 TSPOP30536 169 aa13.16□□□□□ -0.3
TRAK1-207ENST00000469506 ID3Q02535 119 aa13.16□□□□□ -0.3
TRAK1-207ENST00000469506 PYDC2Q56P42 97 aa13.16□□□□□ -0.3
TRAK1-207ENST00000469506 PATE2Q6UY27 113 aa13.16□□□□□ -0.3
TRAK1-207ENST00000469506 ZNF738Q8NE65 137 aa13.16□□□□□ -0.3
TRAK1-207ENST00000469506 GPR82Q96P67 336 aa13.16□□□□□ -0.3
TRAK1-207ENST00000469506 STRAPQ9Y3F4 350 aaKnown RBP13.16□□□□□ -0.3
TRAK1-207ENST00000469506 NBDYA0A0U1RRE5 68 aa13.15□□□□□ -0.3
TRAK1-207ENST00000469506 F5H768 121 aa13.15□□□□□ -0.3
TRAK1-207ENST00000469506 BOLA2-SMG1P6H3BVE0 249 aa13.15□□□□□ -0.3
TRAK1-207ENST00000469506 CXCL3P19876 107 aa13.15□□□□□ -0.3
TRAK1-207ENST00000469506 FAUP35544 74 aaKnown RBP13.15□□□□□ -0.3
TRAK1-207ENST00000469506 FAM3BP58499 235 aaPredicted RBP13.15□□□□□ -0.3
TRAK1-207ENST00000469506 POLR2GP62487 172 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAK1-207ENST00000469506 RPP30P78346 268 aaKnown RBP13.15□□□□□ -0.3
TRAK1-207ENST00000469506 LINC00588Q9Y4M8 146 aa13.15□□□□□ -0.3
TRAK1-207ENST00000469506 APOBP04114 4563 aaKnown RBP13.14□□□□□ -0.31
TRAK1-207ENST00000469506 MRPS12O15235 138 aaKnown RBP13.14□□□□□ -0.31
TRAK1-207ENST00000469506 NUDT3O95989 172 aa13.14□□□□□ -0.31
TRAK1-207ENST00000469506 PLP1P60201 277 aa13.14□□□□□ -0.31
TRAK1-207ENST00000469506 HIST1H1AQ02539 215 aaPredicted RBP13.14□□□□□ -0.31
TRAK1-207ENST00000469506 KIR3DS1Q14943 382 aa13.14□□□□□ -0.31
TRAK1-207ENST00000469506 OR8A1Q8NGG7 326 aa13.14□□□□□ -0.31
TRAK1-207ENST00000469506 SLC25A21Q9BQT8 299 aaPredicted RBP13.14□□□□□ -0.31
TRAK1-207ENST00000469506 ATG101Q9BSB4 218 aa13.14□□□□□ -0.31
TRAK1-207ENST00000469506 HIGD1AQ9Y241 93 aa13.14□□□□□ -0.31
TRAK1-207ENST00000469506 PIGBOS1A0A0B4J2F0 54 aa13.13□□□□□ -0.31
TRAK1-207ENST00000469506 SMCO3A2RU48 225 aa13.13□□□□□ -0.31
TRAK1-207ENST00000469506 IL5P05113 134 aa13.13□□□□□ -0.31
TRAK1-207ENST00000469506 RNF141Q8WVD5 230 aa13.13□□□□□ -0.31
TRAK1-207ENST00000469506 LINC01587Q99440 93 aa13.13□□□□□ -0.31
TRAK1-207ENST00000469506 A0A087X0K7 114 aa13.12□□□□□ -0.31
TRAK1-207ENST00000469506 C9orf170A2RU37 121 aa13.12□□□□□ -0.31
TRAK1-207ENST00000469506 HYPMO75409 117 aa13.12□□□□□ -0.31
TRAK1-207ENST00000469506 SNRPCP09234 159 aaKnown RBP13.12□□□□□ -0.31
TRAK1-207ENST00000469506 LINC00869P0C866 280 aa13.12□□□□□ -0.31
TRAK1-207ENST00000469506 B2MP61769 119 aa13.12□□□□□ -0.31
TRAK1-207ENST00000469506 RRAS2P62070 204 aaPredicted RBP13.12□□□□□ -0.31
TRAK1-207ENST00000469506 PSG3Q16557 428 aa13.12□□□□□ -0.31
TRAK1-207ENST00000469506 PSENENQ9NZ42 101 aa13.12□□□□□ -0.31
TRAK1-207ENST00000469506 CBY3A6NI87 242 aa13.11□□□□□ -0.31
TRAK1-207ENST00000469506 C16orf90A8MZG2 172 aa13.11□□□□□ -0.31
TRAK1-207ENST00000469506 ATP5G1P05496 136 aa13.11□□□□□ -0.31
TRAK1-207ENST00000469506 OR5G3P0C626 314 aa13.11□□□□□ -0.31
TRAK1-207ENST00000469506 HTN1P15515 57 aa13.11□□□□□ -0.31
TRAK1-207ENST00000469506 RPL7P18124 248 aaKnown RBP13.11□□□□□ -0.31
TRAK1-207ENST00000469506 ATP5G3P48201 142 aa13.11□□□□□ -0.31
TRAK1-207ENST00000469506 AP3S2P59780 193 aa13.11□□□□□ -0.31
TRAK1-207ENST00000469506 RHOBP62745 196 aa13.11□□□□□ -0.31
TRAK1-207ENST00000469506 C6orf223Q8N319 242 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms