RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 CD5P06127 495 aa6.19□□□□□ -1.42
HDAC6-216ENST00000468949 FOLR2P14207 255 aa6.19□□□□□ -1.42
HDAC6-216ENST00000468949 RPL7P18124 248 aaKnown RBP6.19□□□□□ -1.42
HDAC6-216ENST00000468949 CRYBB3P26998 211 aa6.19□□□□□ -1.42
HDAC6-216ENST00000468949 C1orf194Q5T5A4 169 aa6.19□□□□□ -1.42
HDAC6-216ENST00000468949 C9orf66Q5T8R8 295 aa6.19□□□□□ -1.42
HDAC6-216ENST00000468949 ALKAL2Q6UX46 152 aa6.19□□□□□ -1.42
HDAC6-216ENST00000468949 DPPA3Q6W0C5 159 aa6.19□□□□□ -1.42
HDAC6-216ENST00000468949 RBPMS2Q6ZRY4 209 aaKnown RBP6.19□□□□□ -1.42
HDAC6-216ENST00000468949 BPIFA4PQ86YQ2 179 aa6.19□□□□□ -1.42
HDAC6-216ENST00000468949 STXBP6Q8NFX7 210 aa6.19□□□□□ -1.42
HDAC6-216ENST00000468949 SHANK2-AS3Q9BTD1 123 aa6.19□□□□□ -1.42
HDAC6-216ENST00000468949 RHPN1-AS1Q9BWJ2 59 aa6.19□□□□□ -1.42
HDAC6-216ENST00000468949 SCRT1Q9BWW7 348 aa6.19□□□□□ -1.42
HDAC6-216ENST00000468949 TECRQ9NZ01 308 aaKnown RBP6.19□□□□□ -1.42
HDAC6-216ENST00000468949 FUT9Q9Y231 359 aa6.19□□□□□ -1.42
HDAC6-216ENST00000468949 MGAM2Q2M2H8 2515 aa6.18□□□□□ -1.42
HDAC6-216ENST00000468949 ZNF98A6NK75 572 aa6.18□□□□□ -1.42
HDAC6-216ENST00000468949 ZNF785A8K8V0 405 aa6.18□□□□□ -1.42
HDAC6-216ENST00000468949 DNASE2O00115 360 aaPredicted RBP6.18□□□□□ -1.42
HDAC6-216ENST00000468949 CBLN1P23435 193 aa6.18□□□□□ -1.42
HDAC6-216ENST00000468949 INSL3P51460 131 aa6.18□□□□□ -1.42
HDAC6-216ENST00000468949 UBE2L3P68036 154 aaKnown RBP6.18□□□□□ -1.42
HDAC6-216ENST00000468949 PAFAH1B2P68402 229 aa6.18□□□□□ -1.42
HDAC6-216ENST00000468949 GCSAMLQ5JQS6 135 aa6.18□□□□□ -1.42
HDAC6-216ENST00000468949 LEMD1Q68G75 181 aa6.18□□□□□ -1.42
HDAC6-216ENST00000468949 LCN12Q6JVE5 192 aa6.18□□□□□ -1.42
HDAC6-216ENST00000468949 SIGLEC15Q6ZMC9 328 aa6.18□□□□□ -1.42
HDAC6-216ENST00000468949 TCF24Q7RTU0 167 aa6.18□□□□□ -1.42
HDAC6-216ENST00000468949 LRRC20Q8TCA0 184 aa6.18□□□□□ -1.42
HDAC6-216ENST00000468949 RNF141Q8WVD5 230 aa6.18□□□□□ -1.42
HDAC6-216ENST00000468949 UBQLN2Q9UHD9 624 aa6.18□□□□□ -1.42
HDAC6-216ENST00000468949 SMPXQ9UHP9 88 aa6.18□□□□□ -1.42
HDAC6-216ENST00000468949 RFNGQ9Y644 331 aa6.18□□□□□ -1.42
HDAC6-216ENST00000468949 IGKV3-7A0A075B6H7 116 aa6.17□□□□□ -1.42
HDAC6-216ENST00000468949 CTXND1A0A1B0GTU2 59 aa6.17□□□□□ -1.42
HDAC6-216ENST00000468949 MAP1LC3B2A6NCE7 125 aa6.17□□□□□ -1.42
HDAC6-216ENST00000468949 ZNF705EA8MWA4 302 aaPredicted RBP6.17□□□□□ -1.42
HDAC6-216ENST00000468949 CHEK1O14757 476 aa6.17□□□□□ -1.42
HDAC6-216ENST00000468949 CSN3P07498 182 aa6.17□□□□□ -1.42
HDAC6-216ENST00000468949 C8orf88P0DMB2 117 aa6.17□□□□□ -1.42
HDAC6-216ENST00000468949 GUCA2BQ16661 112 aa6.17□□□□□ -1.42
HDAC6-216ENST00000468949 FAM74A1Q5RGS3 127 aa6.17□□□□□ -1.42
HDAC6-216ENST00000468949 SAMD13Q5VXD3 122 aa6.17□□□□□ -1.42
HDAC6-216ENST00000468949 PQLC2Q6ZP29 291 aa6.17□□□□□ -1.42
HDAC6-216ENST00000468949 MIR17HGQ75NE6 70 aa6.17□□□□□ -1.42
HDAC6-216ENST00000468949 OR2K2Q8NGT1 345 aa6.17□□□□□ -1.42
HDAC6-216ENST00000468949 TMEM37Q8WXS4 190 aa6.17□□□□□ -1.42
HDAC6-216ENST00000468949 PAXXQ9BUH6 204 aa6.17□□□□□ -1.42
HDAC6-216ENST00000468949 MAP1LC3BQ9GZQ8 125 aa6.17□□□□□ -1.42
HDAC6-216ENST00000468949 VSIRQ9H7M9 311 aa6.17□□□□□ -1.42
HDAC6-216ENST00000468949 SEPSECSQ9HD40 501 aaKnown RBP6.17□□□□□ -1.42
HDAC6-216ENST00000468949 RPRMQ9NS64 109 aa6.17□□□□□ -1.42
HDAC6-216ENST00000468949 SIGLEC8Q9NYZ4 499 aa6.17□□□□□ -1.42
HDAC6-216ENST00000468949 ZMAT5Q9UDW3 170 aaKnown RBP6.17□□□□□ -1.42
HDAC6-216ENST00000468949 HMGB3O15347 200 aaKnown RBP6.16□□□□□ -1.42
HDAC6-216ENST00000468949 BUB3O43684 328 aa6.16□□□□□ -1.42
HDAC6-216ENST00000468949 CXorf1O96002 111 aa6.16□□□□□ -1.42
HDAC6-216ENST00000468949 HBE1P02100 147 aa6.16□□□□□ -1.42
HDAC6-216ENST00000468949 APOHP02749 345 aaPredicted RBP6.16□□□□□ -1.42
HDAC6-216ENST00000468949 H2AFB1P0C5Y9 115 aa6.16□□□□□ -1.42
HDAC6-216ENST00000468949 MEOX2P50222 304 aa6.16□□□□□ -1.42
HDAC6-216ENST00000468949 SULT1A2P50226 295 aa6.16□□□□□ -1.42
HDAC6-216ENST00000468949 RAB14P61106 215 aa6.16□□□□□ -1.42
HDAC6-216ENST00000468949 BLOC1S1P78537 153 aa6.16□□□□□ -1.42
HDAC6-216ENST00000468949 SPATA31B1PQ5VZV4 182 aa6.16□□□□□ -1.42
HDAC6-216ENST00000468949 C16orf54Q6UWD8 224 aa6.16□□□□□ -1.42
HDAC6-216ENST00000468949 TEX261Q6UWH6 196 aa6.16□□□□□ -1.42
HDAC6-216ENST00000468949 LCN15Q6UWW0 184 aa6.16□□□□□ -1.42
HDAC6-216ENST00000468949 PATE2Q6UY27 113 aa6.16□□□□□ -1.42
HDAC6-216ENST00000468949 SFT2D1Q8WV19 159 aa6.16□□□□□ -1.42
HDAC6-216ENST00000468949 RAB24Q969Q5 203 aa6.16□□□□□ -1.42
HDAC6-216ENST00000468949 OR51M1Q9H341 326 aa6.16□□□□□ -1.42
HDAC6-216ENST00000468949 MLXQ9UH92 298 aa6.16□□□□□ -1.42
HDAC6-216ENST00000468949 PKD1L1Q8TDX9 2849 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 TRAV5A0A0B4J249 113 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 TRAV25A0A0B4J276 109 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 A0A1B0GV50 99 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 OR4C46A6NHA9 309 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 OR10J4P0C629 311 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 ARL14EPLP0DKL9 152 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 IGLL1P15814 213 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 EDN2P20800 178 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 ID1P41134 155 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 TFPI2P48307 235 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 SNRPD3P62318 126 aaKnown RBP6.15□□□□□ -1.42
HDAC6-216ENST00000468949 GUK1Q16774 197 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 CD300EQ496F6 205 aaPredicted RBP6.15□□□□□ -1.42
HDAC6-216ENST00000468949 IL34Q6ZMJ4 242 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 GTSCR1Q86UQ5 136 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 GBGT1Q8N5D6 347 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 RPP25LQ8N5L8 163 aaKnown RBP6.15□□□□□ -1.42
HDAC6-216ENST00000468949 BLNKQ8WV28 456 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 GLMPQ8WWB7 406 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 ZNF414Q96IQ9 312 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 C16orf92Q96LL3 132 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 SLC25A2Q9BXI2 301 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 NRN1Q9NPD7 142 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 TMEM167BQ9NRX6 74 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 TMEM14CQ9P0S9 112 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms