RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 YPEL4Q96NS1 127 aa11.07□□□□□ -0.64
COL27A1-203ENST00000468565 FKBP11Q9NYL4 201 aa11.07□□□□□ -0.64
COL27A1-203ENST00000468565 PRSS46E5RG02 174 aa11.06□□□□□ -0.64
COL27A1-203ENST00000468565 TMEM250H0YL14 139 aa11.06□□□□□ -0.64
COL27A1-203ENST00000468565 UPK2O00526 184 aa11.06□□□□□ -0.64
COL27A1-203ENST00000468565 HMGB3O15347 200 aaKnown RBP11.06□□□□□ -0.64
COL27A1-203ENST00000468565 CRYGCP07315 174 aa11.06□□□□□ -0.64
COL27A1-203ENST00000468565 GPX4P36969 197 aaPredicted RBP11.06□□□□□ -0.64
COL27A1-203ENST00000468565 ATP5G2Q06055 141 aa11.06□□□□□ -0.64
COL27A1-203ENST00000468565 KLF5Q13887 457 aaPredicted RBP11.06□□□□□ -0.64
COL27A1-203ENST00000468565 KLK9Q2XQG4 91 aa11.06□□□□□ -0.64
COL27A1-203ENST00000468565 KLK9Q9UKQ9 250 aa11.06□□□□□ -0.64
COL27A1-203ENST00000468565 A0A1W2PPV4 95 aa11.05□□□□□ -0.64
COL27A1-203ENST00000468565 PRR20EP86478 221 aa11.05□□□□□ -0.64
COL27A1-203ENST00000468565 PRR20CP86479 221 aa11.05□□□□□ -0.64
COL27A1-203ENST00000468565 PRR20DP86480 221 aa11.05□□□□□ -0.64
COL27A1-203ENST00000468565 PRR20BP86481 221 aa11.05□□□□□ -0.64
COL27A1-203ENST00000468565 PRR20AP86496 221 aa11.05□□□□□ -0.64
COL27A1-203ENST00000468565 SRSF8Q9BRL6 282 aaKnown RBP11.05□□□□□ -0.64
COL27A1-203ENST00000468565 PLEKHA3Q9HB20 300 aa11.05□□□□□ -0.64
COL27A1-203ENST00000468565 SDF2L1Q9HCN8 221 aa11.05□□□□□ -0.64
COL27A1-203ENST00000468565 NPVFQ9HCQ7 196 aa11.05□□□□□ -0.64
COL27A1-203ENST00000468565 NAT8Q9UHE5 227 aa11.05□□□□□ -0.64
COL27A1-203ENST00000468565 CGB1A6NKQ9 187 aa11.05□□□□□ -0.64
COL27A1-203ENST00000468565 TRBV12-3P01733 135 aa11.05□□□□□ -0.64
COL27A1-203ENST00000468565 ATP5IP56385 69 aaPredicted RBP11.05□□□□□ -0.64
COL27A1-203ENST00000468565 CD69Q07108 199 aa11.05□□□□□ -0.64
COL27A1-203ENST00000468565 RAB31Q13636 194 aa11.05□□□□□ -0.64
COL27A1-203ENST00000468565 ANKRD39Q53RE8 183 aa11.05□□□□□ -0.64
COL27A1-203ENST00000468565 HINT2Q9BX68 163 aa11.05□□□□□ -0.64
COL27A1-203ENST00000468565 TMEM242Q9NWH2 141 aa11.05□□□□□ -0.64
COL27A1-203ENST00000468565 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.04□□□□□ -0.64
COL27A1-203ENST00000468565 FNDC10F2Z333 226 aa11.04□□□□□ -0.64
COL27A1-203ENST00000468565 OR2J3O76001 311 aa11.04□□□□□ -0.64
COL27A1-203ENST00000468565 AREGP15514 252 aa11.04□□□□□ -0.64
COL27A1-203ENST00000468565 HIST1H1BP16401 226 aaKnown RBP11.04□□□□□ -0.64
COL27A1-203ENST00000468565 PRCDQ00LT1 54 aa11.04□□□□□ -0.64
COL27A1-203ENST00000468565 RPEL1Q2QD12 228 aa11.04□□□□□ -0.64
COL27A1-203ENST00000468565 OR9G4Q8NGQ1 327 aa11.04□□□□□ -0.64
COL27A1-203ENST00000468565 TMEM170AQ8WVE7 144 aa11.04□□□□□ -0.64
COL27A1-203ENST00000468565 MGST2Q99735 147 aa11.04□□□□□ -0.64
COL27A1-203ENST00000468565 SMIM7Q9BQ49 75 aa11.04□□□□□ -0.64
COL27A1-203ENST00000468565 GGTLC1Q9BX51 225 aa11.04□□□□□ -0.64
COL27A1-203ENST00000468565 COMMD5Q9GZQ3 224 aa11.04□□□□□ -0.64
COL27A1-203ENST00000468565 PXMP4Q9Y6I8 212 aa11.04□□□□□ -0.64
COL27A1-203ENST00000468565 COL7A1Q02388 2944 aa11.04□□□□□ -0.64
COL27A1-203ENST00000468565 MYOD1P15172 320 aa11.03□□□□□ -0.64
COL27A1-203ENST00000468565 TMEM241Q24JQ0 296 aa11.03□□□□□ -0.64
COL27A1-203ENST00000468565 C15orf32Q32M92 178 aa11.03□□□□□ -0.64
COL27A1-203ENST00000468565 CYP2G1PQ6ZSU1 146 aa11.03□□□□□ -0.64
COL27A1-203ENST00000468565 FANCD2OSQ96PS1 177 aa11.03□□□□□ -0.64
COL27A1-203ENST00000468565 CTDSP1Q9GZU7 261 aa11.03□□□□□ -0.64
COL27A1-203ENST00000468565 PAGE4O60829 102 aa11.03□□□□□ -0.64
COL27A1-203ENST00000468565 IGLV1-51P01701 117 aa11.03□□□□□ -0.64
COL27A1-203ENST00000468565 GP9P14770 177 aa11.03□□□□□ -0.64
COL27A1-203ENST00000468565 RPS10P46783 165 aaKnown RBP11.03□□□□□ -0.64
COL27A1-203ENST00000468565 SYNJ2BPP57105 145 aa11.03□□□□□ -0.64
COL27A1-203ENST00000468565 ELOBQ15370 118 aa11.03□□□□□ -0.64
COL27A1-203ENST00000468565 TEPPQ6URK8 271 aa11.03□□□□□ -0.64
COL27A1-203ENST00000468565 OR5B3Q8NH48 314 aa11.03□□□□□ -0.64
COL27A1-203ENST00000468565 SIGLEC8Q9NYZ4 499 aa11.03□□□□□ -0.64
COL27A1-203ENST00000468565 FBXL7Q9UJT9 491 aa11.03□□□□□ -0.64
COL27A1-203ENST00000468565 IGLC7A0M8Q6 106 aa11.02□□□□□ -0.65
COL27A1-203ENST00000468565 BMPR1BO00238 502 aa11.02□□□□□ -0.65
COL27A1-203ENST00000468565 YIF1AO95070 293 aa11.02□□□□□ -0.65
COL27A1-203ENST00000468565 ZNF674Q2M3X9 581 aa11.02□□□□□ -0.65
COL27A1-203ENST00000468565 MIC13Q5XKP0 118 aa11.02□□□□□ -0.65
COL27A1-203ENST00000468565 C19orf35Q6ZS72 473 aa11.02□□□□□ -0.65
COL27A1-203ENST00000468565 Q8WTZ3 238 aa11.02□□□□□ -0.65
COL27A1-203ENST00000468565 IGLV11-55A0A075B6I3 123 aa11.01□□□□□ -0.65
COL27A1-203ENST00000468565 TEX50A0A1B0GTY4 177 aa11.01□□□□□ -0.65
COL27A1-203ENST00000468565 GATAD1Q8WUU5 269 aa11.01□□□□□ -0.65
COL27A1-203ENST00000468565 RPUSD4Q96CM3 377 aaKnown RBP11.01□□□□□ -0.65
COL27A1-203ENST00000468565 PEMTQ9UBM1 199 aa11.01□□□□□ -0.65
COL27A1-203ENST00000468565 SMAD5-AS1Q9Y6J3 95 aa11.01□□□□□ -0.65
COL27A1-203ENST00000468565 PDE6DO43924 150 aa11.01□□□□□ -0.65
COL27A1-203ENST00000468565 CXorf1O96002 111 aa11.01□□□□□ -0.65
COL27A1-203ENST00000468565 DEFA4P12838 97 aa11.01□□□□□ -0.65
COL27A1-203ENST00000468565 RND2P52198 227 aa11.01□□□□□ -0.65
COL27A1-203ENST00000468565 FABP9Q0Z7S8 132 aa11.01□□□□□ -0.65
COL27A1-203ENST00000468565 ADIRFQ15847 76 aa11.01□□□□□ -0.65
COL27A1-203ENST00000468565 GCSAMLQ5JQS6 135 aa11.01□□□□□ -0.65
COL27A1-203ENST00000468565 OR1L8Q8NGR8 309 aa11.01□□□□□ -0.65
COL27A1-203ENST00000468565 C2orf88Q9BSF0 95 aa11.01□□□□□ -0.65
COL27A1-203ENST00000468565 PARLQ9H300 379 aa11.01□□□□□ -0.65
COL27A1-203ENST00000468565 URGCP-MRPS24S4R325 110 aa11.01□□□□□ -0.65
COL27A1-203ENST00000468565 C11orf94C9JXX5 98 aa11□□□□□ -0.65
COL27A1-203ENST00000468565 F6UZH7 168 aa11□□□□□ -0.65
COL27A1-203ENST00000468565 TGOLN2O43493 480 aa11□□□□□ -0.65
COL27A1-203ENST00000468565 NDUFB8O95169 186 aa11□□□□□ -0.65
COL27A1-203ENST00000468565 REG1AP05451 166 aa11□□□□□ -0.65
COL27A1-203ENST00000468565 NHLRC4P0CG21 123 aaPredicted RBP11□□□□□ -0.65
COL27A1-203ENST00000468565 RPL29P47914 159 aaKnown RBP11□□□□□ -0.65
COL27A1-203ENST00000468565 C2orf83Q53S99 150 aa11□□□□□ -0.65
COL27A1-203ENST00000468565 EEF1AKMT3Q96AZ1 226 aa11□□□□□ -0.65
COL27A1-203ENST00000468565 TXNDC17Q9BRA2 123 aa11□□□□□ -0.65
COL27A1-203ENST00000468565 GGCTO75223 188 aaKnown RBP10.99□□□□□ -0.65
COL27A1-203ENST00000468565 CSN3P07498 182 aa10.99□□□□□ -0.65
COL27A1-203ENST00000468565 CXCL1P09341 107 aa10.99□□□□□ -0.65
COL27A1-203ENST00000468565 RHOBP62745 196 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms