RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 ZNF320A2RRD8 509 aa11.67□□□□□ -0.54
TSSC4-208ENST00000467308 TGOLN2O43493 480 aa11.67□□□□□ -0.54
TSSC4-208ENST00000467308 SPRY2O43597 315 aa11.67□□□□□ -0.54
TSSC4-208ENST00000467308 TOMM40O96008 361 aa11.67□□□□□ -0.54
TSSC4-208ENST00000467308 ADMP35318 185 aa11.67□□□□□ -0.54
TSSC4-208ENST00000467308 SULT1A2P50226 295 aa11.67□□□□□ -0.54
TSSC4-208ENST00000467308 APOC4P55056 127 aa11.67□□□□□ -0.54
TSSC4-208ENST00000467308 PLP1P60201 277 aa11.67□□□□□ -0.54
TSSC4-208ENST00000467308 ZNF90Q03938 601 aa11.67□□□□□ -0.54
TSSC4-208ENST00000467308 ALKAL2Q6UX46 152 aa11.67□□□□□ -0.54
TSSC4-208ENST00000467308 CLEC19AQ6UXS0 136 aa11.67□□□□□ -0.54
TSSC4-208ENST00000467308 DPPA3Q6W0C5 159 aa11.67□□□□□ -0.54
TSSC4-208ENST00000467308 RPP25LQ8N5L8 163 aaKnown RBP11.67□□□□□ -0.54
TSSC4-208ENST00000467308 STPG3Q8N7X2 389 aa11.67□□□□□ -0.54
TSSC4-208ENST00000467308 MARC2Q969Z3 335 aa11.67□□□□□ -0.54
TSSC4-208ENST00000467308 SLC39A9Q9NUM3 307 aa11.67□□□□□ -0.54
TSSC4-208ENST00000467308 UBQLN2Q9UHD9 624 aa11.67□□□□□ -0.54
TSSC4-208ENST00000467308 OR2T8A6NH00 312 aa11.66□□□□□ -0.54
TSSC4-208ENST00000467308 RD3LP0DJH9 198 aa11.66□□□□□ -0.54
TSSC4-208ENST00000467308 GPR183P32249 361 aa11.66□□□□□ -0.54
TSSC4-208ENST00000467308 B2MP61769 119 aa11.66□□□□□ -0.54
TSSC4-208ENST00000467308 RELQ04864 619 aaPredicted RBP11.66□□□□□ -0.54
TSSC4-208ENST00000467308 TIGITQ495A1 244 aa11.66□□□□□ -0.54
TSSC4-208ENST00000467308 MIC13Q5XKP0 118 aa11.66□□□□□ -0.54
TSSC4-208ENST00000467308 BPIFCQ8NFQ6 507 aa11.66□□□□□ -0.54
TSSC4-208ENST00000467308 LRRC20Q8TCA0 184 aa11.66□□□□□ -0.54
TSSC4-208ENST00000467308 CHRDL1Q9BU40 450 aa11.66□□□□□ -0.54
TSSC4-208ENST00000467308 PLA2G2EQ9NZK7 142 aa11.66□□□□□ -0.54
TSSC4-208ENST00000467308 SELENOKQ9Y6D0 94 aa11.66□□□□□ -0.54
TSSC4-208ENST00000467308 S4R3C0 116 aa11.66□□□□□ -0.54
TSSC4-208ENST00000467308 DNAH10Q8IVF4 4471 aa11.65□□□□□ -0.54
TSSC4-208ENST00000467308 UBE2CO00762 179 aa11.65□□□□□ -0.54
TSSC4-208ENST00000467308 YIF1AO95070 293 aa11.65□□□□□ -0.54
TSSC4-208ENST00000467308 IGHV3-23P01764 117 aa11.65□□□□□ -0.54
TSSC4-208ENST00000467308 C8orf88P0DMB2 117 aa11.65□□□□□ -0.54
TSSC4-208ENST00000467308 PSG1P11464 419 aa11.65□□□□□ -0.54
TSSC4-208ENST00000467308 M6PRP20645 277 aa11.65□□□□□ -0.54
TSSC4-208ENST00000467308 ACOT6Q3I5F7 207 aaPredicted RBP11.65□□□□□ -0.54
TSSC4-208ENST00000467308 TMEM41BQ5BJD5 291 aa11.65□□□□□ -0.54
TSSC4-208ENST00000467308 FFAR4Q5NUL3 377 aa11.65□□□□□ -0.54
TSSC4-208ENST00000467308 AKR1C8PQ5T2L2 129 aa11.65□□□□□ -0.54
TSSC4-208ENST00000467308 ZNF600Q6ZNG1 722 aa11.65□□□□□ -0.54
TSSC4-208ENST00000467308 TMEM182Q6ZP80 229 aaPredicted RBP11.65□□□□□ -0.54
TSSC4-208ENST00000467308 Q6ZRG5 221 aa11.65□□□□□ -0.54
TSSC4-208ENST00000467308 RBPMS2Q6ZRY4 209 aaKnown RBP11.65□□□□□ -0.54
TSSC4-208ENST00000467308 OR51G1Q8NGK1 321 aa11.65□□□□□ -0.54
TSSC4-208ENST00000467308 RNF141Q8WVD5 230 aa11.65□□□□□ -0.54
TSSC4-208ENST00000467308 RFNGQ9Y644 331 aa11.65□□□□□ -0.54
TSSC4-208ENST00000467308 ELOA3CA0A087WX78 387 aaPredicted RBP11.64□□□□□ -0.55
TSSC4-208ENST00000467308 KIR2DL5BA0A0G2JN68 375 aa11.64□□□□□ -0.55
TSSC4-208ENST00000467308 KIR2DL5BA0A0G2JPC4 375 aa11.64□□□□□ -0.55
TSSC4-208ENST00000467308 DEFB135Q30KP9 77 aa11.64□□□□□ -0.55
TSSC4-208ENST00000467308 LGALS9CQ6DKI2 356 aa11.64□□□□□ -0.55
TSSC4-208ENST00000467308 KIR2DL5AQ8N109 375 aa11.64□□□□□ -0.55
TSSC4-208ENST00000467308 KIR2DL5BQ8NHK3 375 aa11.64□□□□□ -0.55
TSSC4-208ENST00000467308 Q8WTZ3 238 aa11.64□□□□□ -0.55
TSSC4-208ENST00000467308 ZNF414Q96IQ9 312 aa11.64□□□□□ -0.55
TSSC4-208ENST00000467308 SPAG8Q99932 426 aaPredicted RBP11.64□□□□□ -0.55
TSSC4-208ENST00000467308 MRPL27Q9P0M9 148 aaKnown RBP11.64□□□□□ -0.55
TSSC4-208ENST00000467308 ELLP55199 621 aaPredicted RBP11.63□□□□□ -0.55
TSSC4-208ENST00000467308 UNQ9165/PRO28630Q6UXU0 137 aa11.63□□□□□ -0.55
TSSC4-208ENST00000467308 OR1L4Q8NGR5 311 aa11.63□□□□□ -0.55
TSSC4-208ENST00000467308 GATAD1Q8WUU5 269 aa11.63□□□□□ -0.55
TSSC4-208ENST00000467308 RNF183Q96D59 192 aa11.63□□□□□ -0.55
TSSC4-208ENST00000467308 SAT2Q96F10 170 aaPredicted RBP11.63□□□□□ -0.55
TSSC4-208ENST00000467308 PFDN5Q99471 154 aa11.63□□□□□ -0.55
TSSC4-208ENST00000467308 RNF2Q99496 336 aa11.63□□□□□ -0.55
TSSC4-208ENST00000467308 RPRMQ9NS64 109 aa11.63□□□□□ -0.55
TSSC4-208ENST00000467308 PCLOQ9Y6V0 5065 aa11.63□□□□□ -0.55
TSSC4-208ENST00000467308 HECTD4Q9Y4D8 3996 aa11.63□□□□□ -0.55
TSSC4-208ENST00000467308 NDUFA4O00483 81 aa11.62□□□□□ -0.55
TSSC4-208ENST00000467308 GATA2P23769 480 aaPredicted RBP11.62□□□□□ -0.55
TSSC4-208ENST00000467308 FAM74A1Q5RGS3 127 aa11.62□□□□□ -0.55
TSSC4-208ENST00000467308 S100A7AQ86SG5 101 aa11.62□□□□□ -0.55
TSSC4-208ENST00000467308 DNAJC4Q9NNZ3 241 aa11.62□□□□□ -0.55
TSSC4-208ENST00000467308 UFC1Q9Y3C8 167 aa11.62□□□□□ -0.55
TSSC4-208ENST00000467308 HYPMO75409 117 aa11.61□□□□□ -0.55
TSSC4-208ENST00000467308 OR5G3P0C626 314 aa11.61□□□□□ -0.55
TSSC4-208ENST00000467308 RAB2AP61019 212 aa11.61□□□□□ -0.55
TSSC4-208ENST00000467308 BLOC1S1P78537 153 aa11.61□□□□□ -0.55
TSSC4-208ENST00000467308 OR10G4Q8NGN3 311 aa11.61□□□□□ -0.55
TSSC4-208ENST00000467308 OR10G9Q8NGN4 311 aa11.61□□□□□ -0.55
TSSC4-208ENST00000467308 OR10G7Q8NGN6 311 aa11.61□□□□□ -0.55
TSSC4-208ENST00000467308 PHLDA1Q8WV24 401 aaPredicted RBP11.61□□□□□ -0.55
TSSC4-208ENST00000467308 RNF125Q96EQ8 232 aa11.61□□□□□ -0.55
TSSC4-208ENST00000467308 TRAV1-1A0A0B4J248 108 aa11.6□□□□□ -0.55
TSSC4-208ENST00000467308 TSPAN4O14817 238 aa11.6□□□□□ -0.55
TSSC4-208ENST00000467308 S100A7P31151 101 aa11.6□□□□□ -0.55
TSSC4-208ENST00000467308 TOMM20LQ6UXN7 152 aa11.6□□□□□ -0.55
TSSC4-208ENST00000467308 PATE2Q6UY27 113 aa11.6□□□□□ -0.55
TSSC4-208ENST00000467308 MBD3L1Q8WWY6 194 aa11.6□□□□□ -0.55
TSSC4-208ENST00000467308 TMEM37Q8WXS4 190 aa11.6□□□□□ -0.55
TSSC4-208ENST00000467308 MRPL32Q9BYC8 188 aaKnown RBP11.6□□□□□ -0.55
TSSC4-208ENST00000467308 ACTR3CQ9C0K3 210 aaPredicted RBP11.6□□□□□ -0.55
TSSC4-208ENST00000467308 VSIRQ9H7M9 311 aa11.6□□□□□ -0.55
TSSC4-208ENST00000467308 ZFAND3Q9H8U3 227 aa11.6□□□□□ -0.55
TSSC4-208ENST00000467308 RNF24Q9Y225 148 aa11.6□□□□□ -0.55
TSSC4-208ENST00000467308 PUS1Q9Y606 427 aaKnown RBP eCLIP11.6□□□□□ -0.55
TSSC4-208ENST00000467308 COX7A2P2O60397 106 aa11.59□□□□□ -0.55
TSSC4-208ENST00000467308 IL4P05112 153 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms