RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 RBPMS2Q6ZRY4 209 aaKnown RBP15.32■□□□□ 0.04
LIMS2-212ENST00000466410 KIR3DL3Q8N743 410 aa15.32■□□□□ 0.04
LIMS2-212ENST00000466410 SH2D7A6NKC9 451 aaPredicted RBP15.32■□□□□ 0.04
LIMS2-212ENST00000466410 K7ENP7 123 aa15.32■□□□□ 0.04
LIMS2-212ENST00000466410 Q56UQ5 140 aa15.32■□□□□ 0.04
LIMS2-212ENST00000466410 C2orf70A6NJV1 201 aa15.31■□□□□ 0.04
LIMS2-212ENST00000466410 COL8A1P27658 744 aa15.31■□□□□ 0.04
LIMS2-212ENST00000466410 PMCHL1Q16048 86 aa15.31■□□□□ 0.04
LIMS2-212ENST00000466410 OR8B3Q8NGG8 313 aa15.31■□□□□ 0.04
LIMS2-212ENST00000466410 OR8B2Q96RD0 313 aa15.31■□□□□ 0.04
LIMS2-212ENST00000466410 RNF5Q99942 180 aa15.31■□□□□ 0.04
LIMS2-212ENST00000466410 TMEM208Q9BTX3 173 aa15.31■□□□□ 0.04
LIMS2-212ENST00000466410 GFRA4Q9GZZ7 299 aa15.31■□□□□ 0.04
LIMS2-212ENST00000466410 LPAR2Q9HBW0 351 aa15.31■□□□□ 0.04
LIMS2-212ENST00000466410 HILPDAQ9Y5L2 63 aa15.31■□□□□ 0.04
LIMS2-212ENST00000466410 NBASA2RRP1 2371 aa15.31■□□□□ 0.04
LIMS2-212ENST00000466410 NPIPB6E9PJ23 425 aa15.31■□□□□ 0.04
LIMS2-212ENST00000466410 RBM14Q96PK6 669 aaKnown RBP15.31■□□□□ 0.04
LIMS2-212ENST00000466410 TXN2Q99757 166 aa15.31■□□□□ 0.04
LIMS2-212ENST00000466410 CLEC5AQ9NY25 188 aa15.31■□□□□ 0.04
LIMS2-212ENST00000466410 SOX21Q9Y651 276 aaPredicted RBP15.31■□□□□ 0.04
LIMS2-212ENST00000466410 LIPFP07098 398 aa15.31■□□□□ 0.04
LIMS2-212ENST00000466410 BTF3P20290 206 aaKnown RBP15.31■□□□□ 0.04
LIMS2-212ENST00000466410 TFPI2P48307 235 aa15.31■□□□□ 0.04
LIMS2-212ENST00000466410 Q6ZN92 141 aa15.31■□□□□ 0.04
LIMS2-212ENST00000466410 ASCL2Q99929 193 aa15.31■□□□□ 0.04
LIMS2-212ENST00000466410 ZNF785A8K8V0 405 aa15.3■□□□□ 0.04
LIMS2-212ENST00000466410 HOXB4P17483 251 aaPredicted RBP15.3■□□□□ 0.04
LIMS2-212ENST00000466410 ARF6P62330 175 aa15.3■□□□□ 0.04
LIMS2-212ENST00000466410 KLF17Q5JT82 389 aaPredicted RBP15.3■□□□□ 0.04
LIMS2-212ENST00000466410 SPATA12Q7Z6I5 190 aa15.3■□□□□ 0.04
LIMS2-212ENST00000466410 LY6G5BQ8NDX9 201 aa15.3■□□□□ 0.04
LIMS2-212ENST00000466410 SHANK2-AS3Q9BTD1 123 aa15.3■□□□□ 0.04
LIMS2-212ENST00000466410 S4R3C0 116 aa15.3■□□□□ 0.04
LIMS2-212ENST00000466410 TRBV19A0A075B6N1 114 aa15.29■□□□□ 0.04
LIMS2-212ENST00000466410 HTR1DP28221 377 aa15.29■□□□□ 0.04
LIMS2-212ENST00000466410 FBLN7Q53RD9 439 aa15.29■□□□□ 0.04
LIMS2-212ENST00000466410 CSMD1Q96PZ7 3565 aa15.29■□□□□ 0.04
LIMS2-212ENST00000466410 FAM120AOSQ5T036 256 aa15.29■□□□□ 0.04
LIMS2-212ENST00000466410 KLHDC1Q8N7A1 406 aa15.29■□□□□ 0.04
LIMS2-212ENST00000466410 SRSF8Q9BRL6 282 aaKnown RBP15.29■□□□□ 0.04
LIMS2-212ENST00000466410 H3BRN7 92 aa15.28■□□□□ 0.04
LIMS2-212ENST00000466410 HNRNPA3P51991 378 aaKnown RBP15.28■□□□□ 0.04
LIMS2-212ENST00000466410 KLRD1Q13241 179 aa15.28■□□□□ 0.04
LIMS2-212ENST00000466410 BPIFA4PQ86YQ2 179 aa15.28■□□□□ 0.04
LIMS2-212ENST00000466410 ZNF491Q8N8L2 437 aa15.28■□□□□ 0.04
LIMS2-212ENST00000466410 DPM3Q9P2X0 92 aa15.28■□□□□ 0.04
LIMS2-212ENST00000466410 FAM231BA6NCW3 169 aa15.28■□□□□ 0.04
LIMS2-212ENST00000466410 NBR2O15453 112 aa15.28■□□□□ 0.04
LIMS2-212ENST00000466410 DLEU1O43261 78 aa15.28■□□□□ 0.04
LIMS2-212ENST00000466410 CFHR4Q92496 578 aa15.28■□□□□ 0.04
LIMS2-212ENST00000466410 ZC2HC1AQ96GY0 325 aa15.28■□□□□ 0.04
LIMS2-212ENST00000466410 OVOL3O00110 214 aa15.27■□□□□ 0.04
LIMS2-212ENST00000466410 APOHP02749 345 aaPredicted RBP15.27■□□□□ 0.04
LIMS2-212ENST00000466410 IL4P05112 153 aa15.27■□□□□ 0.03
LIMS2-212ENST00000466410 COL5A1-AS1Q5SY13 56 aa15.27■□□□□ 0.03
LIMS2-212ENST00000466410 C16orf54Q6UWD8 224 aa15.27■□□□□ 0.03
LIMS2-212ENST00000466410 SIGLEC15Q6ZMC9 328 aa15.27■□□□□ 0.03
LIMS2-212ENST00000466410 BCL6BQ8N143 479 aaPredicted RBP15.27■□□□□ 0.03
LIMS2-212ENST00000466410 OR4F17Q8NGA8 305 aa15.27■□□□□ 0.03
LIMS2-212ENST00000466410 RNF125Q96EQ8 232 aa15.27■□□□□ 0.03
LIMS2-212ENST00000466410 TRAV9-2A0A087WT02 112 aa15.26■□□□□ 0.03
LIMS2-212ENST00000466410 LOC102724200A0A096LPH7 203 aaPredicted RBP15.26■□□□□ 0.03
LIMS2-212ENST00000466410 A0A1W2PRD5 423 aa15.26■□□□□ 0.03
LIMS2-212ENST00000466410 A0A1W2PRF3 423 aa15.26■□□□□ 0.03
LIMS2-212ENST00000466410 A0A1W2PRM7 423 aa15.26■□□□□ 0.03
LIMS2-212ENST00000466410 CHEK1O14757 476 aa15.26■□□□□ 0.03
LIMS2-212ENST00000466410 NHLH1Q02575 133 aa15.26■□□□□ 0.03
LIMS2-212ENST00000466410 CDSNQ15517 529 aa15.26■□□□□ 0.03
LIMS2-212ENST00000466410 LINC00173Q6ZV60 143 aa15.26■□□□□ 0.03
LIMS2-212ENST00000466410 ATRXP46100 2492 aa15.26■□□□□ 0.03
LIMS2-212ENST00000466410 IGHV1-24A0A0C4DH33 117 aa15.26■□□□□ 0.03
LIMS2-212ENST00000466410 HLA-DRB1P01911 266 aa15.26■□□□□ 0.03
LIMS2-212ENST00000466410 STPG4Q8N801 248 aa15.26■□□□□ 0.03
LIMS2-212ENST00000466410 OR11H6Q8NGC7 330 aa15.26■□□□□ 0.03
LIMS2-212ENST00000466410 LAMTOR2Q9Y2Q5 125 aa15.26■□□□□ 0.03
LIMS2-212ENST00000466410 HAX1O00165 279 aa15.25■□□□□ 0.03
LIMS2-212ENST00000466410 NPSP0C0P6 89 aa15.25■□□□□ 0.03
LIMS2-212ENST00000466410 IGLL1P15814 213 aa15.25■□□□□ 0.03
LIMS2-212ENST00000466410 TMEM70Q9BUB7 260 aa15.25■□□□□ 0.03
LIMS2-212ENST00000466410 FCGR2BP31994 310 aaPredicted RBP15.25■□□□□ 0.03
LIMS2-212ENST00000466410 MSRB2Q9Y3D2 182 aa15.25■□□□□ 0.03
LIMS2-212ENST00000466410 TRBV6-1A0A0K0K1D8 114 aa15.24■□□□□ 0.03
LIMS2-212ENST00000466410 M0R3E3 92 aa15.24■□□□□ 0.03
LIMS2-212ENST00000466410 MRPS12O15235 138 aaKnown RBP15.24■□□□□ 0.03
LIMS2-212ENST00000466410 TSPOP30536 169 aa15.24■□□□□ 0.03
LIMS2-212ENST00000466410 ZNF138P52744 262 aa15.24■□□□□ 0.03
LIMS2-212ENST00000466410 HES1Q14469 280 aa15.24■□□□□ 0.03
LIMS2-212ENST00000466410 FBXL19-AS1Q494R0 122 aa15.24■□□□□ 0.03
LIMS2-212ENST00000466410 FAM162BQ5T6X4 162 aa15.24■□□□□ 0.03
LIMS2-212ENST00000466410 TMEM75Q8N9X5 138 aa15.24■□□□□ 0.03
LIMS2-212ENST00000466410 CHCHD1Q96BP2 118 aaKnown RBP15.24■□□□□ 0.03
LIMS2-212ENST00000466410 NDFIP1Q9BT67 221 aa15.24■□□□□ 0.03
LIMS2-212ENST00000466410 HRNRQ86YZ3 2850 aaPredicted RBP15.24■□□□□ 0.03
LIMS2-212ENST00000466410 NDUFA3O95167 84 aa15.24■□□□□ 0.03
LIMS2-212ENST00000466410 LINC00614P0C842 121 aa15.24■□□□□ 0.03
LIMS2-212ENST00000466410 NPBQ8NG41 125 aa15.24■□□□□ 0.03
LIMS2-212ENST00000466410 PSG8Q9UQ74 426 aa15.24■□□□□ 0.03
LIMS2-212ENST00000466410 CCL21O00585 134 aa15.23■□□□□ 0.03
LIMS2-212ENST00000466410 ZNF414Q96IQ9 312 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms