RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 UBE2DNLQ8IWF7 75 aa9.6□□□□□ -0.87
CHD3-207ENST00000466233 TMEM256Q8N2U0 113 aa9.6□□□□□ -0.87
CHD3-207ENST00000466233 C20orf173Q96LM9 149 aa9.6□□□□□ -0.87
CHD3-207ENST00000466233 SCRT1Q9BWW7 348 aa9.6□□□□□ -0.87
CHD3-207ENST00000466233 F6UB75 175 aa9.59□□□□□ -0.87
CHD3-207ENST00000466233 WRBO00258 174 aa9.59□□□□□ -0.87
CHD3-207ENST00000466233 INSP01308 110 aa9.59□□□□□ -0.87
CHD3-207ENST00000466233 ORM2P19652 201 aa9.59□□□□□ -0.87
CHD3-207ENST00000466233 S100A5P33763 92 aa9.59□□□□□ -0.87
CHD3-207ENST00000466233 FXYD7P58549 80 aa9.59□□□□□ -0.87
CHD3-207ENST00000466233 DEFB1P60022 68 aa9.59□□□□□ -0.87
CHD3-207ENST00000466233 DAD1P61803 113 aa9.59□□□□□ -0.87
CHD3-207ENST00000466233 PPP1R1AQ13522 171 aa9.59□□□□□ -0.87
CHD3-207ENST00000466233 SPANXN5Q5MJ07 72 aa9.59□□□□□ -0.87
CHD3-207ENST00000466233 GSG1LQ6UXU4 331 aa9.59□□□□□ -0.87
CHD3-207ENST00000466233 SHANK2-AS3Q9BTD1 123 aa9.59□□□□□ -0.87
CHD3-207ENST00000466233 TMEM208Q9BTX3 173 aa9.59□□□□□ -0.87
CHD3-207ENST00000466233 SLC25A22Q9H936 323 aa9.59□□□□□ -0.87
CHD3-207ENST00000466233 V9GYH0 126 aa9.59□□□□□ -0.87
CHD3-207ENST00000466233 A0A087X0K7 114 aa9.58□□□□□ -0.88
CHD3-207ENST00000466233 NAP1L6A6NFF2 107 aa9.58□□□□□ -0.88
CHD3-207ENST00000466233 H3BRN7 92 aa9.58□□□□□ -0.88
CHD3-207ENST00000466233 CRXO43186 299 aaPredicted RBP9.58□□□□□ -0.88
CHD3-207ENST00000466233 CXCL2P19875 107 aa9.58□□□□□ -0.88
CHD3-207ENST00000466233 CNN1P51911 297 aaKnown RBP9.58□□□□□ -0.88
CHD3-207ENST00000466233 RAP2BP61225 183 aa9.58□□□□□ -0.88
CHD3-207ENST00000466233 AKR1C1Q04828 323 aa9.58□□□□□ -0.88
CHD3-207ENST00000466233 ACOT7LQ6ZUV0 252 aa9.58□□□□□ -0.88
CHD3-207ENST00000466233 OR11H7Q8NGC8 314 aa9.58□□□□□ -0.88
CHD3-207ENST00000466233 SMIM8Q96KF7 97 aa9.58□□□□□ -0.88
CHD3-207ENST00000466233 SLC25A39Q9BZJ4 359 aaPredicted RBP9.58□□□□□ -0.88
CHD3-207ENST00000466233 PAIP2BQ9ULR5 123 aaKnown RBP9.58□□□□□ -0.88
CHD3-207ENST00000466233 KIAA1109Q2LD37 5005 aa9.57□□□□□ -0.88
CHD3-207ENST00000466233 TRAV8-2A0A0B4J237 113 aa9.57□□□□□ -0.88
CHD3-207ENST00000466233 HYPMO75409 117 aa9.57□□□□□ -0.88
CHD3-207ENST00000466233 IL5P05113 134 aa9.57□□□□□ -0.88
CHD3-207ENST00000466233 TAS2R30P59541 319 aa9.57□□□□□ -0.88
CHD3-207ENST00000466233 DLK1P80370 383 aa9.57□□□□□ -0.88
CHD3-207ENST00000466233 CNPY1Q3B7I2 92 aa9.57□□□□□ -0.88
CHD3-207ENST00000466233 CYP2G1PQ6ZSU1 146 aa9.57□□□□□ -0.88
CHD3-207ENST00000466233 CCDC190Q86UF4 302 aa9.57□□□□□ -0.88
CHD3-207ENST00000466233 NPVFQ9HCQ7 196 aa9.57□□□□□ -0.88
CHD3-207ENST00000466233 HIGD1AQ9Y241 93 aa9.57□□□□□ -0.88
CHD3-207ENST00000466233 PMS2P5A8MQ11 134 aa9.56□□□□□ -0.88
CHD3-207ENST00000466233 ZNF701M0R085 212 aaPredicted RBP9.56□□□□□ -0.88
CHD3-207ENST00000466233 M0R2N4 97 aa9.56□□□□□ -0.88
CHD3-207ENST00000466233 HOXB5P09067 269 aa9.56□□□□□ -0.88
CHD3-207ENST00000466233 C1orf134Q5TEV5 83 aa9.56□□□□□ -0.88
CHD3-207ENST00000466233 TMEM88Q6PEY1 159 aa9.56□□□□□ -0.88
CHD3-207ENST00000466233 TMEM182Q6ZP80 229 aaPredicted RBP9.56□□□□□ -0.88
CHD3-207ENST00000466233 ZNF493Q6ZR52 646 aa9.56□□□□□ -0.88
CHD3-207ENST00000466233 C20orf144Q9BQM9 153 aa9.56□□□□□ -0.88
CHD3-207ENST00000466233 GGACTQ9BVM4 153 aa9.56□□□□□ -0.88
CHD3-207ENST00000466233 C9orf170A2RU37 121 aa9.55□□□□□ -0.88
CHD3-207ENST00000466233 CBY3A6NI87 242 aa9.55□□□□□ -0.88
CHD3-207ENST00000466233 BOLA2-SMG1P6H3BVE0 249 aa9.55□□□□□ -0.88
CHD3-207ENST00000466233 NDUFB6O95139 128 aa9.55□□□□□ -0.88
CHD3-207ENST00000466233 CXCL3P19876 107 aa9.55□□□□□ -0.88
CHD3-207ENST00000466233 GATA2P23769 480 aaPredicted RBP9.55□□□□□ -0.88
CHD3-207ENST00000466233 TAS2R60P59551 318 aa9.55□□□□□ -0.88
CHD3-207ENST00000466233 SPANXN2Q5MJ10 180 aa9.55□□□□□ -0.88
CHD3-207ENST00000466233 TMEM14EPQ6UXP3 125 aa9.55□□□□□ -0.88
CHD3-207ENST00000466233 OR8A1Q8NGG7 326 aa9.55□□□□□ -0.88
CHD3-207ENST00000466233 PSENENQ9NZ42 101 aa9.55□□□□□ -0.88
CHD3-207ENST00000466233 TSC22D2O75157 780 aa9.54□□□□□ -0.88
CHD3-207ENST00000466233 LINC00869P0C866 280 aa9.54□□□□□ -0.88
CHD3-207ENST00000466233 POLR2GP62487 172 aaKnown RBP eCLIP9.54□□□□□ -0.88
CHD3-207ENST00000466233 PSG3Q16557 428 aa9.54□□□□□ -0.88
CHD3-207ENST00000466233 SPINK13Q1W4C9 94 aa9.54□□□□□ -0.88
CHD3-207ENST00000466233 TEPPQ6URK8 271 aa9.54□□□□□ -0.88
CHD3-207ENST00000466233 ZNF738Q8NE65 137 aa9.54□□□□□ -0.88
CHD3-207ENST00000466233 OR10P1Q8NGE3 313 aa9.54□□□□□ -0.88
CHD3-207ENST00000466233 C16orf74Q96GX8 76 aa9.54□□□□□ -0.88
CHD3-207ENST00000466233 PLA2G2EQ9NZK7 142 aa9.54□□□□□ -0.88
CHD3-207ENST00000466233 FAT2Q9NYQ8 4349 aa9.54□□□□□ -0.88
CHD3-207ENST00000466233 PCLOQ9Y6V0 5065 aa9.53□□□□□ -0.88
CHD3-207ENST00000466233 PLAC8L1A1L4L8 177 aa9.53□□□□□ -0.88
CHD3-207ENST00000466233 M0R2Z0 102 aa9.53□□□□□ -0.88
CHD3-207ENST00000466233 ATP5G1P05496 136 aa9.53□□□□□ -0.88
CHD3-207ENST00000466233 HTN3P15516 51 aa9.53□□□□□ -0.88
CHD3-207ENST00000466233 CDKN1BP46527 198 aa9.53□□□□□ -0.88
CHD3-207ENST00000466233 ATP5G3P48201 142 aa9.53□□□□□ -0.88
CHD3-207ENST00000466233 LCN15Q6UWW0 184 aa9.53□□□□□ -0.88
CHD3-207ENST00000466233 ZNF503Q96F45 646 aa9.53□□□□□ -0.88
CHD3-207ENST00000466233 SLC50A1Q9BRV3 221 aa9.53□□□□□ -0.88
CHD3-207ENST00000466233 SRRQ9GZT4 340 aa9.53□□□□□ -0.88
CHD3-207ENST00000466233 TIMM8BQ9Y5J9 83 aaPredicted RBP9.53□□□□□ -0.88
CHD3-207ENST00000466233 IGLV2-18A0A075B6J9 118 aa9.52□□□□□ -0.89
CHD3-207ENST00000466233 ZNF705GA8MUZ8 300 aaPredicted RBP9.52□□□□□ -0.89
CHD3-207ENST00000466233 H3BP45 60 aa9.52□□□□□ -0.89
CHD3-207ENST00000466233 H7BYZ3 331 aa9.52□□□□□ -0.89
CHD3-207ENST00000466233 MRPS12O15235 138 aaKnown RBP9.52□□□□□ -0.89
CHD3-207ENST00000466233 ADAP1O75689 374 aa9.52□□□□□ -0.89
CHD3-207ENST00000466233 OR5G3P0C626 314 aa9.52□□□□□ -0.89
CHD3-207ENST00000466233 OR4E1P0C645 316 aa9.52□□□□□ -0.89
CHD3-207ENST00000466233 BTF3P20290 206 aaKnown RBP9.52□□□□□ -0.89
CHD3-207ENST00000466233 CCL18P55774 89 aa9.52□□□□□ -0.89
CHD3-207ENST00000466233 ZNF546Q86UE3 836 aa9.52□□□□□ -0.89
CHD3-207ENST00000466233 ATG101Q9BSB4 218 aa9.52□□□□□ -0.89
CHD3-207ENST00000466233 MGAT4CQ9UBM8 478 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms