RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 HIST1H2BMQ99879 126 aa4.7□□□□□ -1.66
CHMP3-206ENST00000466032 FAM103A1Q9BTL3 118 aaKnown RBP4.7□□□□□ -1.66
CHMP3-206ENST00000466032 SNHG12Q9BXW3 62 aa4.7□□□□□ -1.66
CHMP3-206ENST00000466032 NPCDR1Q9BY65 106 aa4.7□□□□□ -1.66
CHMP3-206ENST00000466032 SMIM3Q9BZL3 60 aa4.7□□□□□ -1.66
CHMP3-206ENST00000466032 WFDC1Q9HC57 220 aa4.7□□□□□ -1.66
CHMP3-206ENST00000466032 FBXL7Q9UJT9 491 aa4.7□□□□□ -1.66
CHMP3-206ENST00000466032 ACANP16112 2415 aa4.7□□□□□ -1.66
CHMP3-206ENST00000466032 TLN2Q9Y4G6 2542 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 TET2Q6N021 2002 aaPredicted RBP4.69□□□□□ -1.66
CHMP3-206ENST00000466032 UBE2L5PA0A1B0GUS4 154 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 PRSS47A8MTI9 375 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 ZNF705EA8MWA4 302 aaPredicted RBP4.69□□□□□ -1.66
CHMP3-206ENST00000466032 G3V318 75 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 K7EIM0 57 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 AGPAT2O15120 278 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 NDUFB8O95169 186 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 TRGV3P03979 118 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 REG1AP05451 166 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 GZMBP10144 247 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 ATP6V0CP27449 155 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 OR10J1P30954 320 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 TPPP2P59282 170 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 TAS2R45P59539 299 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 ZNF616Q08AN1 781 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 ARL16Q0P5N6 197 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 FOXL1Q12952 345 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 PSG3Q16557 428 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 C15orf32Q32M92 178 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 COL5A1-AS1Q5SY13 56 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 CYP2G1PQ6ZSU1 146 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 ZNF664Q8N3J9 261 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 STXBP6Q8NFX7 210 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 Q8WTZ3 238 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 NPIPB3Q92617 1050 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 SMIM12Q96EX1 92 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 HIST1H2BLQ99880 126 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 SMR3AQ99954 134 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 SCRT1Q9BWW7 348 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 MRPL32Q9BYC8 188 aaKnown RBP4.69□□□□□ -1.66
CHMP3-206ENST00000466032 CTDSP1Q9GZU7 261 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 SLC35B3Q9H1N7 401 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 FNDC4Q9H6D8 234 aaPredicted RBP4.69□□□□□ -1.66
CHMP3-206ENST00000466032 RPS10P5Q9NQ39 176 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 TNFRSF19Q9NS68 423 aa4.69□□□□□ -1.66
CHMP3-206ENST00000466032 SOX21Q9Y651 276 aaPredicted RBP4.69□□□□□ -1.66
CHMP3-206ENST00000466032 ZANQ9Y493 2812 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.68□□□□□ -1.66
CHMP3-206ENST00000466032 A0A1W2PPV4 95 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 CLPSL1A2RUU4 121 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 BMPR1BO00238 502 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 PHOX2AO14813 284 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 HMGB3O15347 200 aaKnown RBP4.68□□□□□ -1.66
CHMP3-206ENST00000466032 OR2J3O76001 311 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 OR2C1O95371 312 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 PRH1P02810 166 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 IGLC1P0CG04 106 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 RD3LP0DJH9 198 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 PF4V1P10720 104 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 MFAP2P55001 183 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 RHOBP62745 196 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 RUNX1Q01196 453 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 PMS2P11Q13670 270 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 C21orf62-AS1Q17RA5 79 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 Q56UQ5 140 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 TMEM41BQ5BJD5 291 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 ZNF343Q6P1L6 599 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 Q6ZSV7 163 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 LINC01551Q86U37 167 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 KLHDC1Q8N7A1 406 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 NUDT10Q8NFP7 164 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 OR51G1Q8NGK1 321 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 ZNF502Q8TBZ5 544 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 MYOZ3Q8TDC0 251 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 RBMXL1Q96E39 390 aaKnown RBP4.68□□□□□ -1.66
CHMP3-206ENST00000466032 GPR82Q96P67 336 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 GGTLC1Q9BX51 225 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 DNAJC4Q9NNZ3 241 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 ESM1Q9NQ30 184 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 SERTAD4Q9NUC0 356 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 SLC39A9Q9NUM3 307 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 AURKAIP1Q9NWT8 199 aaPredicted RBP4.68□□□□□ -1.66
CHMP3-206ENST00000466032 PXMP4Q9Y6I8 212 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 SVEP1Q4LDE5 3571 aa4.68□□□□□ -1.66
CHMP3-206ENST00000466032 TRAV1-1A0A0B4J248 108 aa4.67□□□□□ -1.66
CHMP3-206ENST00000466032 CTXND1A0A1B0GTU2 59 aa4.67□□□□□ -1.66
CHMP3-206ENST00000466032 A0A1W2PS18 150 aa4.67□□□□□ -1.66
CHMP3-206ENST00000466032 LINC01548A6NM66 108 aa4.67□□□□□ -1.66
CHMP3-206ENST00000466032 NDUFA4O00483 81 aa4.67□□□□□ -1.66
CHMP3-206ENST00000466032 HYPMO75409 117 aa4.67□□□□□ -1.66
CHMP3-206ENST00000466032 CLEC3BP05452 202 aa4.67□□□□□ -1.66
CHMP3-206ENST00000466032 NBEAP1P0C6P0 100 aa4.67□□□□□ -1.66
CHMP3-206ENST00000466032 APELAP0DMC3 54 aa4.67□□□□□ -1.66
CHMP3-206ENST00000466032 ELLP55199 621 aaPredicted RBP4.67□□□□□ -1.66
CHMP3-206ENST00000466032 GUK1Q16774 197 aa4.67□□□□□ -1.66
CHMP3-206ENST00000466032 FAM106AQ4KMX7 169 aa4.67□□□□□ -1.66
CHMP3-206ENST00000466032 FFAR4Q5NUL3 377 aa4.67□□□□□ -1.66
CHMP3-206ENST00000466032 TOMM20LQ6UXN7 152 aa4.67□□□□□ -1.66
CHMP3-206ENST00000466032 PQLC2Q6ZP29 291 aa4.67□□□□□ -1.66
CHMP3-206ENST00000466032 STPG3Q8N7X2 389 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms