RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 ARL2-SNX15V9GYD0 113 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 ACANP16112 2415 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 NOTCH2Q04721 2471 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 IGHV3-21A0A0B4J1V1 117 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 CLPSL1A2RUU4 121 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 CYSRT1A8MQ03 144 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 I3L521 148 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 BMPR1BO00238 502 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 GGCTO75223 188 aaKnown RBP4.2□□□□□ -1.74
VPS41-211ENST00000466017 CXorf1O96002 111 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 IGHV3-48P01763 117 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 HSPB1P04792 205 aaKnown RBP4.2□□□□□ -1.74
VPS41-211ENST00000466017 CD5P06127 495 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 GATA2P23769 480 aaPredicted RBP4.2□□□□□ -1.74
VPS41-211ENST00000466017 CDC34P49427 236 aaPredicted RBP4.2□□□□□ -1.74
VPS41-211ENST00000466017 FHL3Q13643 280 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 TIGITQ495A1 244 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 KHDC3LQ587J8 217 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 C1orf194Q5T5A4 169 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 FAM78BQ5VT40 261 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 CLEC19AQ6UXS0 136 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 ZNF329Q86UD4 541 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 ARL6IP6Q8N6S5 226 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 OR5AU1Q8NGC0 362 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 OR4X2Q8NGF9 303 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 FAM213BQ8TBF2 198 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 FAM167A-AS1Q96KT0 104 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 MS4A10Q96PG2 267 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 PRR25Q96S07 402 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 CHRDL1Q9BU40 450 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 NKX6-2Q9C056 277 aaPredicted RBP4.2□□□□□ -1.74
VPS41-211ENST00000466017 TMEM167BQ9NRX6 74 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 TMEM14CQ9P0S9 112 aa4.2□□□□□ -1.74
VPS41-211ENST00000466017 MAP1LC3B2A6NCE7 125 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 OR2T8A6NH00 312 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 H3BRN7 92 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 LGALS9O00182 355 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 COX7A2P2O60397 106 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 LGALS1P09382 135 aaKnown RBP4.19□□□□□ -1.74
VPS41-211ENST00000466017 ZP3P21754 424 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 CRYBB3P26998 211 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 FHITP49789 147 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 PEA15Q15121 130 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 TMEM95Q3KNT9 176 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 FAM106AQ4KMX7 169 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 AWAT1Q58HT5 328 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 C10orf113Q5VZT2 155 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 FAM122CQ6P4D5 195 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 TOMM20LQ6UXN7 152 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 LINC00305Q7Z4B0 112 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 SFT2D1Q8WV19 159 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 RNF125Q96EQ8 232 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 FAM210AQ96ND0 272 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 GPR82Q96P67 336 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 DUX5Q96PT3 197 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 SHANK2-AS3Q9BTD1 123 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 PBDC1Q9BVG4 233 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 SLC25A39Q9BZJ4 359 aaPredicted RBP4.19□□□□□ -1.74
VPS41-211ENST00000466017 MAP1LC3BQ9GZQ8 125 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 HRH4Q9H3N8 390 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 SEPSECSQ9HD40 501 aaKnown RBP4.19□□□□□ -1.74
VPS41-211ENST00000466017 HIGD1AQ9Y241 93 aa4.19□□□□□ -1.74
VPS41-211ENST00000466017 FLNAP21333 2647 aaKnown RBP4.18□□□□□ -1.74
VPS41-211ENST00000466017 A0A1W2PRE2 83 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 A0A1W2PS18 150 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 RBFOX3A6NFN3 312 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 ZNF98A6NK75 572 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 MRPS12O15235 138 aaKnown RBP4.18□□□□□ -1.74
VPS41-211ENST00000466017 BUB3O43684 328 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 ZNF253O75346 499 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 IFNA1P01562 189 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 IL4P05112 153 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 HIST1H1EP10412 219 aaKnown RBP4.18□□□□□ -1.74
VPS41-211ENST00000466017 ORM2P19652 201 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 GCHFRP30047 84 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 GPR183P32249 361 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 ARL3P36405 182 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 MEOX2P50222 304 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 CCL20P78556 96 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 USF2Q15853 346 aaPredicted RBP4.18□□□□□ -1.74
VPS41-211ENST00000466017 GUK1Q16774 197 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 GCSAMLQ5JQS6 135 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 TCTEX1D4Q5JR98 221 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 ZNF506Q5JVG8 444 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 LCN15Q6UWW0 184 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 MIR17HGQ75NE6 70 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 SSX7Q7RTT5 188 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 LYPD1Q8N2G4 141 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 OR1B1Q8NGR6 318 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 C4orf3Q8WVX3 66 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 TCEAL7Q9BRU2 100 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 OR51M1Q9H341 326 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 MANBALQ9NQG1 85 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 CLEC5AQ9NY25 188 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 SIGLEC8Q9NYZ4 499 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 RABAC1Q9UI14 185 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 VAX2Q9UIW0 290 aa4.18□□□□□ -1.74
VPS41-211ENST00000466017 TSSC4Q9Y5U2 329 aaPredicted RBP4.18□□□□□ -1.74
VPS41-211ENST00000466017 PUS1Q9Y606 427 aaKnown RBP eCLIP4.18□□□□□ -1.74
VPS41-211ENST00000466017 BAHCC1Q9P281 2608 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms