RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 LOC102724200A0A096LPH7 203 aaPredicted RBP15.02■□□□□ -0
SKA3-205ENST00000465471 ZNF688P0C7X2 276 aa15.02■□□□□ -0
SKA3-205ENST00000465471 GALR1P47211 349 aa15.02■□□□□ -0
SKA3-205ENST00000465471 B2MP61769 119 aa15.02■□□□□ -0
SKA3-205ENST00000465471 S100A7AQ86SG5 101 aa15.02■□□□□ -0
SKA3-205ENST00000465471 AQP10Q96PS8 301 aa15.02■□□□□ -0
SKA3-205ENST00000465471 PXMP4Q9Y6I8 212 aa15.02■□□□□ -0
SKA3-205ENST00000465471 COX7A2P2O60397 106 aa15.01□□□□□ -0.01
SKA3-205ENST00000465471 Q6ZRG5 221 aa15.01□□□□□ -0.01
SKA3-205ENST00000465471 LINC00305Q7Z4B0 112 aa15.01□□□□□ -0.01
SKA3-205ENST00000465471 PARD6GQ9BYG4 376 aaPredicted RBP15.01□□□□□ -0.01
SKA3-205ENST00000465471 MRPS12O15235 138 aaKnown RBP15□□□□□ -0.01
SKA3-205ENST00000465471 MEOX2P50222 304 aa15□□□□□ -0.01
SKA3-205ENST00000465471 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15□□□□□ -0.01
SKA3-205ENST00000465471 OR2T35Q8NGX2 323 aa15□□□□□ -0.01
SKA3-205ENST00000465471 WFDC1Q9HC57 220 aa15□□□□□ -0.01
SKA3-205ENST00000465471 DNAJC4Q9NNZ3 241 aa15□□□□□ -0.01
SKA3-205ENST00000465471 RNF24Q9Y225 148 aa15□□□□□ -0.01
SKA3-205ENST00000465471 NBEAL2Q6ZNJ1 2754 aa14.99□□□□□ -0.01
SKA3-205ENST00000465471 KIR2DL5BA0A0G2JN68 375 aa14.99□□□□□ -0.01
SKA3-205ENST00000465471 KIR2DL5BA0A0G2JPC4 375 aa14.99□□□□□ -0.01
SKA3-205ENST00000465471 RPL7P18124 248 aaKnown RBP14.99□□□□□ -0.01
SKA3-205ENST00000465471 PSMB3P49720 205 aa14.99□□□□□ -0.01
SKA3-205ENST00000465471 SNRPD3P62318 126 aaKnown RBP14.99□□□□□ -0.01
SKA3-205ENST00000465471 SAMD13Q5VXD3 122 aa14.99□□□□□ -0.01
SKA3-205ENST00000465471 MORN5Q5VZ52 161 aa14.99□□□□□ -0.01
SKA3-205ENST00000465471 C10orf113Q5VZT2 155 aa14.99□□□□□ -0.01
SKA3-205ENST00000465471 KIR2DL5AQ8N109 375 aa14.99□□□□□ -0.01
SKA3-205ENST00000465471 OR1L4Q8NGR5 311 aa14.99□□□□□ -0.01
SKA3-205ENST00000465471 KIR2DL5BQ8NHK3 375 aa14.99□□□□□ -0.01
SKA3-205ENST00000465471 PFDN5Q99471 154 aa14.99□□□□□ -0.01
SKA3-205ENST00000465471 SPATA25Q9BR10 227 aa14.99□□□□□ -0.01
SKA3-205ENST00000465471 SMIM3Q9BZL3 60 aa14.99□□□□□ -0.01
SKA3-205ENST00000465471 U3KQK5 164 aa14.99□□□□□ -0.01
SKA3-205ENST00000465471 A0A087X0K7 114 aa14.98□□□□□ -0.01
SKA3-205ENST00000465471 PSMG4Q5JS54 123 aa14.98□□□□□ -0.01
SKA3-205ENST00000465471 RSG1Q9BU20 258 aa14.98□□□□□ -0.01
SKA3-205ENST00000465471 ZMAT4Q9H898 229 aa14.98□□□□□ -0.01
SKA3-205ENST00000465471 KCNIP2Q9NS61 270 aa14.98□□□□□ -0.01
SKA3-205ENST00000465471 RNF222A6NCQ9 220 aa14.97□□□□□ -0.01
SKA3-205ENST00000465471 ISLRO14498 428 aa14.97□□□□□ -0.01
SKA3-205ENST00000465471 GATAD1Q8WUU5 269 aa14.97□□□□□ -0.01
SKA3-205ENST00000465471 RCHY1Q96PM5 261 aa14.97□□□□□ -0.01
SKA3-205ENST00000465471 TNFSF18Q9UNG2 199 aa14.97□□□□□ -0.01
SKA3-205ENST00000465471 APOC4P55056 127 aa14.96□□□□□ -0.01
SKA3-205ENST00000465471 AGRNO00468 2067 aa14.96□□□□□ -0.02
SKA3-205ENST00000465471 C17orf112F2Z3M2 114 aa14.95□□□□□ -0.02
SKA3-205ENST00000465471 IFNA5P01569 189 aa14.95□□□□□ -0.02
SKA3-205ENST00000465471 RPL35AP18077 110 aaKnown RBP14.95□□□□□ -0.02
SKA3-205ENST00000465471 ID1P41134 155 aa14.95□□□□□ -0.02
SKA3-205ENST00000465471 GCSAMLQ5JQS6 135 aa14.95□□□□□ -0.02
SKA3-205ENST00000465471 Q6ZNX1 250 aa14.95□□□□□ -0.02
SKA3-205ENST00000465471 TRPT1Q86TN4 253 aaKnown RBP14.95□□□□□ -0.02
SKA3-205ENST00000465471 ZNF709Q8N972 641 aa14.95□□□□□ -0.02
SKA3-205ENST00000465471 FXYD6-FXYD2A0A087WZ82 144 aa14.94□□□□□ -0.02
SKA3-205ENST00000465471 TRAV8-2A0A0B4J237 113 aa14.94□□□□□ -0.02
SKA3-205ENST00000465471 KNCNA6PVL3 124 aa14.94□□□□□ -0.02
SKA3-205ENST00000465471 UBE2CO00762 179 aa14.94□□□□□ -0.02
SKA3-205ENST00000465471 ATF4P18848 351 aaPredicted RBP14.94□□□□□ -0.02
SKA3-205ENST00000465471 BPIFA4PQ86YQ2 179 aa14.94□□□□□ -0.02
SKA3-205ENST00000465471 RETNQ9HD89 108 aa14.94□□□□□ -0.02
SKA3-205ENST00000465471 TRAV5A0A0B4J249 113 aa14.93□□□□□ -0.02
SKA3-205ENST00000465471 IGLC2P0DOY2 106 aa14.93□□□□□ -0.02
SKA3-205ENST00000465471 Q6ZWC4 215 aa14.93□□□□□ -0.02
SKA3-205ENST00000465471 STHQ8IWL8 128 aa14.93□□□□□ -0.02
SKA3-205ENST00000465471 INO80EQ8NBZ0 244 aaPredicted RBP14.93□□□□□ -0.02
SKA3-205ENST00000465471 SCGB1C1Q8TD33 95 aa14.93□□□□□ -0.02
SKA3-205ENST00000465471 C16orf92Q96LL3 132 aa14.93□□□□□ -0.02
SKA3-205ENST00000465471 C20orf173Q96LM9 149 aa14.93□□□□□ -0.02
SKA3-205ENST00000465471 CXCL2P19875 107 aa14.92□□□□□ -0.02
SKA3-205ENST00000465471 ZNF266Q14584 549 aa14.92□□□□□ -0.02
SKA3-205ENST00000465471 ACTL10Q5JWF8 245 aa14.92□□□□□ -0.02
SKA3-205ENST00000465471 CSTL1Q9H114 145 aa14.92□□□□□ -0.02
SKA3-205ENST00000465471 HLA-DRB4P13762 266 aa14.91□□□□□ -0.02
SKA3-205ENST00000465471 FOXI2Q6ZQN5 318 aa14.91□□□□□ -0.02
SKA3-205ENST00000465471 LINC00052Q96N35 136 aa14.91□□□□□ -0.02
SKA3-205ENST00000465471 OVOL2Q9BRP0 275 aa14.91□□□□□ -0.02
SKA3-205ENST00000465471 HRH4Q9H3N8 390 aa14.91□□□□□ -0.02
SKA3-205ENST00000465471 SAV1Q9H4B6 383 aaPredicted RBP14.91□□□□□ -0.02
SKA3-205ENST00000465471 TMEM14CQ9P0S9 112 aa14.91□□□□□ -0.02
SKA3-205ENST00000465471 TP53TG1Q9Y2A0 90 aa14.91□□□□□ -0.02
SKA3-205ENST00000465471 TIMM9Q9Y5J7 89 aa14.91□□□□□ -0.02
SKA3-205ENST00000465471 HLA-DRB4X5D2U9 266 aa14.91□□□□□ -0.02
SKA3-205ENST00000465471 H3BMM0 161 aa14.9□□□□□ -0.02
SKA3-205ENST00000465471 SMLR1H3BR10 107 aa14.9□□□□□ -0.02
SKA3-205ENST00000465471 GIG44P09565 113 aaPredicted RBP14.9□□□□□ -0.02
SKA3-205ENST00000465471 DEFB1P60022 68 aa14.9□□□□□ -0.02
SKA3-205ENST00000465471 GDF5OSQ5U4N7 250 aa14.9□□□□□ -0.02
SKA3-205ENST00000465471 FAM78BQ5VT40 261 aa14.9□□□□□ -0.02
SKA3-205ENST00000465471 LCN15Q6UWW0 184 aa14.9□□□□□ -0.02
SKA3-205ENST00000465471 FAM167A-AS1Q96KT0 104 aa14.9□□□□□ -0.02
SKA3-205ENST00000465471 MRPL32Q9BYC8 188 aaKnown RBP14.9□□□□□ -0.02
SKA3-205ENST00000465471 RFNGQ9Y644 331 aa14.9□□□□□ -0.02
SKA3-205ENST00000465471 DNAH7Q8WXX0 4024 aa14.9□□□□□ -0.02
SKA3-205ENST00000465471 H3BQ15 152 aa14.89□□□□□ -0.03
SKA3-205ENST00000465471 SPP1P10451 314 aa14.89□□□□□ -0.03
SKA3-205ENST00000465471 FFAR4Q5NUL3 377 aa14.89□□□□□ -0.03
SKA3-205ENST00000465471 SPATA31B1PQ5VZV4 182 aa14.89□□□□□ -0.03
SKA3-205ENST00000465471 RNF183Q96D59 192 aa14.89□□□□□ -0.03
SKA3-205ENST00000465471 CLUHP3Q96NS8 147 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms