RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 LRP1BQ9NZR2 4599 aa10.2□□□□□ -0.78
MCF2L-220ENST00000464800 RSL24D1Q9UHA3 163 aaKnown RBP10.2□□□□□ -0.78
MCF2L-220ENST00000464800 PLAC8L1A1L4L8 177 aa10.19□□□□□ -0.78
MCF2L-220ENST00000464800 CBY3A6NI87 242 aa10.19□□□□□ -0.78
MCF2L-220ENST00000464800 PITX3O75364 302 aa10.19□□□□□ -0.78
MCF2L-220ENST00000464800 RAB11AP62491 216 aa10.19□□□□□ -0.78
MCF2L-220ENST00000464800 FCN2Q15485 313 aa10.19□□□□□ -0.78
MCF2L-220ENST00000464800 DYNC2LI1Q8TCX1 351 aa10.19□□□□□ -0.78
MCF2L-220ENST00000464800 RSG1Q9BU20 258 aa10.19□□□□□ -0.78
MCF2L-220ENST00000464800 Q9H8V8 135 aa10.19□□□□□ -0.78
MCF2L-220ENST00000464800 CCDC59Q9P031 241 aaKnown RBP10.19□□□□□ -0.78
MCF2L-220ENST00000464800 IGKV1OR2-108A0A075B7D4 117 aa10.18□□□□□ -0.78
MCF2L-220ENST00000464800 BOLA2-SMG1P6H3BVE0 249 aa10.18□□□□□ -0.78
MCF2L-220ENST00000464800 IAPPP10997 89 aa10.18□□□□□ -0.78
MCF2L-220ENST00000464800 AZU1P20160 251 aa10.18□□□□□ -0.78
MCF2L-220ENST00000464800 KRTAP10-2P60368 255 aa10.18□□□□□ -0.78
MCF2L-220ENST00000464800 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.18□□□□□ -0.78
MCF2L-220ENST00000464800 TMEM256Q8N2U0 113 aa10.18□□□□□ -0.78
MCF2L-220ENST00000464800 OR1B1Q8NGR6 318 aa10.18□□□□□ -0.78
MCF2L-220ENST00000464800 KRTAP1-5Q9BYS1 174 aa10.18□□□□□ -0.78
MCF2L-220ENST00000464800 PAIP2BQ9ULR5 123 aaKnown RBP10.18□□□□□ -0.78
MCF2L-220ENST00000464800 SLC45A2Q9UMX9 530 aa10.18□□□□□ -0.78
MCF2L-220ENST00000464800 TRAV12-2A0A075B6T6 113 aa10.17□□□□□ -0.78
MCF2L-220ENST00000464800 PIGBOS1A0A0B4J2F0 54 aa10.17□□□□□ -0.78
MCF2L-220ENST00000464800 ZNF98A6NK75 572 aa10.17□□□□□ -0.78
MCF2L-220ENST00000464800 CFDP00746 253 aaPredicted RBP10.17□□□□□ -0.78
MCF2L-220ENST00000464800 BTF3P20290 206 aaKnown RBP10.17□□□□□ -0.78
MCF2L-220ENST00000464800 TNFSF8P32971 234 aa10.17□□□□□ -0.78
MCF2L-220ENST00000464800 GGNBP1Q5YKI7 109 aa10.17□□□□□ -0.78
MCF2L-220ENST00000464800 TMED4Q7Z7H5 227 aa10.17□□□□□ -0.78
MCF2L-220ENST00000464800 RNF182Q8N6D2 247 aa10.17□□□□□ -0.78
MCF2L-220ENST00000464800 THAP8Q8NA92 274 aa10.17□□□□□ -0.78
MCF2L-220ENST00000464800 OR4D5Q8NGN0 318 aa10.17□□□□□ -0.78
MCF2L-220ENST00000464800 RAB2BQ8WUD1 216 aa10.17□□□□□ -0.78
MCF2L-220ENST00000464800 C16orf74Q96GX8 76 aa10.17□□□□□ -0.78
MCF2L-220ENST00000464800 C17orf77Q96MU5 243 aa10.17□□□□□ -0.78
MCF2L-220ENST00000464800 GPR82Q96P67 336 aa10.17□□□□□ -0.78
MCF2L-220ENST00000464800 SOSTQ9BQB4 213 aa10.17□□□□□ -0.78
MCF2L-220ENST00000464800 Q9H3A6 140 aa10.17□□□□□ -0.78
MCF2L-220ENST00000464800 DMBT1Q9UGM3 2413 aaPredicted RBP10.16□□□□□ -0.78
MCF2L-220ENST00000464800 DUXBA0A1W2PPF3 345 aa10.16□□□□□ -0.78
MCF2L-220ENST00000464800 FABP12A6NFH5 140 aa10.16□□□□□ -0.78
MCF2L-220ENST00000464800 EPM2AB3EWF7 344 aa10.16□□□□□ -0.78
MCF2L-220ENST00000464800 S100A7P31151 101 aa10.16□□□□□ -0.78
MCF2L-220ENST00000464800 TMEM128Q5BJH2 165 aa10.16□□□□□ -0.78
MCF2L-220ENST00000464800 IGFL4Q6B9Z1 124 aa10.16□□□□□ -0.78
MCF2L-220ENST00000464800 ZNF738Q8NE65 137 aa10.16□□□□□ -0.78
MCF2L-220ENST00000464800 LINC01587Q99440 93 aa10.16□□□□□ -0.78
MCF2L-220ENST00000464800 SLC25A39Q9BZJ4 359 aaPredicted RBP10.16□□□□□ -0.78
MCF2L-220ENST00000464800 TIMM8BQ9Y5J9 83 aaPredicted RBP10.16□□□□□ -0.78
MCF2L-220ENST00000464800 TRAV8-2A0A0B4J237 113 aa10.15□□□□□ -0.78
MCF2L-220ENST00000464800 A0A1W2PPQ1 181 aa10.15□□□□□ -0.78
MCF2L-220ENST00000464800 SLC25A6P12236 298 aa10.15□□□□□ -0.78
MCF2L-220ENST00000464800 HTN1P15515 57 aa10.15□□□□□ -0.78
MCF2L-220ENST00000464800 TMBIM6P55061 237 aa10.15□□□□□ -0.78
MCF2L-220ENST00000464800 TAS2R60P59551 318 aa10.15□□□□□ -0.78
MCF2L-220ENST00000464800 FGL1Q08830 312 aa10.15□□□□□ -0.78
MCF2L-220ENST00000464800 OR10J6PQ8NGY7 276 aa10.15□□□□□ -0.78
MCF2L-220ENST00000464800 GNPNAT1Q96EK6 184 aaPredicted RBP10.15□□□□□ -0.78
MCF2L-220ENST00000464800 TMEM147Q9BVK8 224 aa10.15□□□□□ -0.78
MCF2L-220ENST00000464800 SLIRPQ9GZT3 109 aaKnown RBP10.15□□□□□ -0.78
MCF2L-220ENST00000464800 APOBP04114 4563 aaKnown RBP10.15□□□□□ -0.78
MCF2L-220ENST00000464800 PRSS46E5RG02 174 aa10.14□□□□□ -0.79
MCF2L-220ENST00000464800 MED6O75586 246 aa10.14□□□□□ -0.79
MCF2L-220ENST00000464800 ORM2P19652 201 aa10.14□□□□□ -0.79
MCF2L-220ENST00000464800 VAMP1P23763 118 aa10.14□□□□□ -0.79
MCF2L-220ENST00000464800 GATA2P23769 480 aaPredicted RBP10.14□□□□□ -0.79
MCF2L-220ENST00000464800 FAUP35544 74 aaKnown RBP10.14□□□□□ -0.79
MCF2L-220ENST00000464800 RHOBP62745 196 aa10.14□□□□□ -0.79
MCF2L-220ENST00000464800 RPP30P78346 268 aaKnown RBP10.14□□□□□ -0.79
MCF2L-220ENST00000464800 HIST1H1AQ02539 215 aaPredicted RBP10.14□□□□□ -0.79
MCF2L-220ENST00000464800 TMEM144Q7Z5S9 345 aa10.14□□□□□ -0.79
MCF2L-220ENST00000464800 LRTM2Q8N967 370 aa10.14□□□□□ -0.79
MCF2L-220ENST00000464800 BPIFCQ8NFQ6 507 aa10.14□□□□□ -0.79
MCF2L-220ENST00000464800 CIB3Q96Q77 187 aaPredicted RBP10.14□□□□□ -0.79
MCF2L-220ENST00000464800 BCL7BQ9BQE9 202 aa10.14□□□□□ -0.79
MCF2L-220ENST00000464800 UPK3BQ9BT76 320 aa10.14□□□□□ -0.79
MCF2L-220ENST00000464800 PPP1R14DQ9NXH3 145 aa10.14□□□□□ -0.79
MCF2L-220ENST00000464800 TRAV26-1A0A087WT03 109 aa10.13□□□□□ -0.79
MCF2L-220ENST00000464800 WRBO00258 174 aa10.13□□□□□ -0.79
MCF2L-220ENST00000464800 SYNGR2O43760 224 aa10.13□□□□□ -0.79
MCF2L-220ENST00000464800 M6PRP20645 277 aa10.13□□□□□ -0.79
MCF2L-220ENST00000464800 DLK1P80370 383 aa10.13□□□□□ -0.79
MCF2L-220ENST00000464800 OR5I1Q13606 314 aa10.13□□□□□ -0.79
MCF2L-220ENST00000464800 TMEM182Q6ZP80 229 aaPredicted RBP10.13□□□□□ -0.79
MCF2L-220ENST00000464800 ZNF493Q6ZR52 646 aa10.13□□□□□ -0.79
MCF2L-220ENST00000464800 RNASE8Q8TDE3 154 aaKnown RBP10.13□□□□□ -0.79
MCF2L-220ENST00000464800 TMEM263Q8WUH6 116 aaKnown RBP10.13□□□□□ -0.79
MCF2L-220ENST00000464800 ZNF503Q96F45 646 aa10.13□□□□□ -0.79
MCF2L-220ENST00000464800 UHRF2Q96PU4 802 aa10.13□□□□□ -0.79
MCF2L-220ENST00000464800 NOP10Q9NPE3 64 aaKnown RBP10.13□□□□□ -0.79
MCF2L-220ENST00000464800 AP3S2P59780 193 aa10.12□□□□□ -0.79
MCF2L-220ENST00000464800 SPANXN5Q5MJ07 72 aa10.12□□□□□ -0.79
MCF2L-220ENST00000464800 TOMM5Q8N4H5 51 aa10.12□□□□□ -0.79
MCF2L-220ENST00000464800 MCFD2Q8NI22 146 aa10.12□□□□□ -0.79
MCF2L-220ENST00000464800 RXFP4Q8TDU9 374 aa10.12□□□□□ -0.79
MCF2L-220ENST00000464800 A0A0J9YY99 117 aa10.11□□□□□ -0.79
MCF2L-220ENST00000464800 H3BMQ9 156 aa10.11□□□□□ -0.79
MCF2L-220ENST00000464800 H3BRN7 92 aa10.11□□□□□ -0.79
MCF2L-220ENST00000464800 ADAP1O75689 374 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms