RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 TM4SF20Q53R12 229 aa10.03□□□□□ -0.8
CLCNKA-204ENST00000464764 LYPD2Q6UXB3 125 aa10.03□□□□□ -0.8
CLCNKA-204ENST00000464764 Q86TA4 180 aa10.03□□□□□ -0.8
CLCNKA-204ENST00000464764 AP5S1Q9NUS5 200 aa10.03□□□□□ -0.8
CLCNKA-204ENST00000464764 HSPB8Q9UJY1 196 aa10.03□□□□□ -0.8
CLCNKA-204ENST00000464764 IGLC1P0CG04 106 aa10.03□□□□□ -0.8
CLCNKA-204ENST00000464764 SP9P0CG40 484 aa10.03□□□□□ -0.8
CLCNKA-204ENST00000464764 COX8AP10176 69 aa10.03□□□□□ -0.8
CLCNKA-204ENST00000464764 PRSS57Q6UWY2 283 aa10.03□□□□□ -0.8
CLCNKA-204ENST00000464764 BPIFA4PQ86YQ2 179 aa10.03□□□□□ -0.8
CLCNKA-204ENST00000464764 STXBP6Q8NFX7 210 aa10.03□□□□□ -0.8
CLCNKA-204ENST00000464764 PRSS3P2Q8NHM4 247 aa10.03□□□□□ -0.8
CLCNKA-204ENST00000464764 JMJD8Q96S16 334 aa10.03□□□□□ -0.8
CLCNKA-204ENST00000464764 ZNF492Q9P255 531 aa10.03□□□□□ -0.8
CLCNKA-204ENST00000464764 TMSB15BA0A087X1C1 80 aa10.02□□□□□ -0.81
CLCNKA-204ENST00000464764 GOSR1O95249 250 aa10.02□□□□□ -0.81
CLCNKA-204ENST00000464764 CT83Q5H943 113 aa10.02□□□□□ -0.81
CLCNKA-204ENST00000464764 GAGE10A6NGK3 116 aa10.02□□□□□ -0.81
CLCNKA-204ENST00000464764 HAX1O00165 279 aa10.02□□□□□ -0.81
CLCNKA-204ENST00000464764 TNFRSF1AP19438 455 aa10.02□□□□□ -0.81
CLCNKA-204ENST00000464764 TMEM97Q5BJF2 176 aa10.02□□□□□ -0.81
CLCNKA-204ENST00000464764 ZADH2Q8N4Q0 377 aa10.02□□□□□ -0.81
CLCNKA-204ENST00000464764 CSTL1Q9H114 145 aa10.02□□□□□ -0.81
CLCNKA-204ENST00000464764 A0A1B0GUT8 65 aa10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 FAM71F2Q6NXP2 309 aa10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 SMIM15Q7Z3B0 74 aa10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 WFDC3Q8IUB2 231 aa10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 MS4A6AQ9H2W1 248 aa10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 PEF1Q9UBV8 284 aaKnown RBP10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 RABAC1Q9UI14 185 aa10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 LRBAP50851 2863 aa10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 SERTM2A0A1B0GWG4 89 aa10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 NPIPB6E9PJ23 425 aa10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 CRIP1P50238 77 aa10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 TIMM23BQ5SRD1 257 aa10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 GFRA4Q9GZZ7 299 aa10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 SOX21Q9Y651 276 aaPredicted RBP10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 A0A096LNJ9 63 aa10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 FBLL1A6NHQ2 334 aaKnown RBP10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 INS-IGF2F8WCM5 200 aa10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 H3BUT2 72 aa10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 CRYGCP07315 174 aa10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 FA2HQ7L5A8 372 aa10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 VSTM2AQ8TAG5 236 aa10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 C8orf46Q8TAG6 207 aa10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 CCL17Q92583 94 aa10.01□□□□□ -0.81
CLCNKA-204ENST00000464764 FGF6P10767 208 aa10□□□□□ -0.81
CLCNKA-204ENST00000464764 ZNF883P0CG24 379 aa10□□□□□ -0.81
CLCNKA-204ENST00000464764 SMIM12Q96EX1 92 aa10□□□□□ -0.81
CLCNKA-204ENST00000464764 AP1S3Q96PC3 154 aa10□□□□□ -0.81
CLCNKA-204ENST00000464764 TRGV9Q99603 122 aa10□□□□□ -0.81
CLCNKA-204ENST00000464764 DCHS2Q6V1P9 2916 aa9.99□□□□□ -0.81
CLCNKA-204ENST00000464764 TMEM213A2RRL7 107 aa9.99□□□□□ -0.81
CLCNKA-204ENST00000464764 M0R3E3 92 aa9.99□□□□□ -0.81
CLCNKA-204ENST00000464764 SLC25A39Q9BZJ4 359 aaPredicted RBP9.99□□□□□ -0.81
CLCNKA-204ENST00000464764 HIGD1AQ9Y241 93 aa9.99□□□□□ -0.81
CLCNKA-204ENST00000464764 S4R3C0 116 aa9.99□□□□□ -0.81
CLCNKA-204ENST00000464764 RELNP78509 3460 aa9.99□□□□□ -0.81
CLCNKA-204ENST00000464764 MALRD1Q5VYJ5 2156 aa9.99□□□□□ -0.81
CLCNKA-204ENST00000464764 RBP4P02753 201 aa9.99□□□□□ -0.81
CLCNKA-204ENST00000464764 NHLH1Q02575 133 aa9.99□□□□□ -0.81
CLCNKA-204ENST00000464764 VMA21Q3ZAQ7 101 aa9.99□□□□□ -0.81
CLCNKA-204ENST00000464764 TEX36Q5VZQ5 186 aa9.99□□□□□ -0.81
CLCNKA-204ENST00000464764 FAM169BQ8N8A8 192 aa9.99□□□□□ -0.81
CLCNKA-204ENST00000464764 IGFBPL1Q8WX77 278 aa9.99□□□□□ -0.81
CLCNKA-204ENST00000464764 THYN1Q9P016 225 aa9.99□□□□□ -0.81
CLCNKA-204ENST00000464764 ABCA4P78363 2273 aa9.99□□□□□ -0.81
CLCNKA-204ENST00000464764 TMEM265A0A087WTH1 108 aa9.98□□□□□ -0.81
CLCNKA-204ENST00000464764 TRAV17A0A0B4J275 112 aa9.98□□□□□ -0.81
CLCNKA-204ENST00000464764 D6R8Y8 96 aa9.98□□□□□ -0.81
CLCNKA-204ENST00000464764 K7ERU9 68 aa9.98□□□□□ -0.81
CLCNKA-204ENST00000464764 BCL6BQ8N143 479 aaPredicted RBP9.98□□□□□ -0.81
CLCNKA-204ENST00000464764 FER1L6-AS1Q8NA97 138 aa9.98□□□□□ -0.81
CLCNKA-204ENST00000464764 C8orf49Q96NF6 230 aa9.98□□□□□ -0.81
CLCNKA-204ENST00000464764 FAM215AQ9Y5M1 114 aa9.98□□□□□ -0.81
CLCNKA-204ENST00000464764 SMKR1H3BMG3 65 aa9.98□□□□□ -0.81
CLCNKA-204ENST00000464764 RPS20P60866 119 aaKnown RBP9.98□□□□□ -0.81
CLCNKA-204ENST00000464764 CACNG7P62955 275 aa9.98□□□□□ -0.81
CLCNKA-204ENST00000464764 PCP2Q8IVA1 136 aa9.98□□□□□ -0.81
CLCNKA-204ENST00000464764 OR10AG1Q8NH19 301 aa9.98□□□□□ -0.81
CLCNKA-204ENST00000464764 OTORQ9NRC9 128 aa9.98□□□□□ -0.81
CLCNKA-204ENST00000464764 F11RQ9Y624 299 aaKnown RBP9.98□□□□□ -0.81
CLCNKA-204ENST00000464764 ASH1LQ9NR48 2969 aaKnown RBP9.98□□□□□ -0.81
CLCNKA-204ENST00000464764 CD40P25942 277 aa9.98□□□□□ -0.81
CLCNKA-204ENST00000464764 RPL27AP46776 148 aaKnown RBP9.98□□□□□ -0.81
CLCNKA-204ENST00000464764 AMN1Q8IY45 258 aa9.98□□□□□ -0.81
CLCNKA-204ENST00000464764 TMEM133Q9H2Q1 129 aa9.98□□□□□ -0.81
CLCNKA-204ENST00000464764 SIGLEC8Q9NYZ4 499 aa9.98□□□□□ -0.81
CLCNKA-204ENST00000464764 SPTBN1Q01082 2364 aaKnown RBP9.97□□□□□ -0.81
CLCNKA-204ENST00000464764 BSNQ9UPA5 3926 aa9.97□□□□□ -0.81
CLCNKA-204ENST00000464764 DEFB109BQ30KR1 87 aa9.97□□□□□ -0.81
CLCNKA-204ENST00000464764 OR4A5Q8NH83 315 aa9.97□□□□□ -0.81
CLCNKA-204ENST00000464764 CSN1S1P47710 185 aa9.97□□□□□ -0.81
CLCNKA-204ENST00000464764 KIR3DS1Q14943 382 aa9.97□□□□□ -0.81
CLCNKA-204ENST00000464764 UFSP1Q6NVU6 142 aa9.97□□□□□ -0.81
CLCNKA-204ENST00000464764 PRSS33Q8NF86 280 aa9.97□□□□□ -0.81
CLCNKA-204ENST00000464764 TMEM186Q96B77 213 aa9.97□□□□□ -0.81
CLCNKA-204ENST00000464764 CTSZQ9UBR2 303 aa9.97□□□□□ -0.81
CLCNKA-204ENST00000464764 MBD3L4A6NDZ8 208 aaPredicted RBP9.96□□□□□ -0.81
CLCNKA-204ENST00000464764 MBD3L3A6NE82 208 aaPredicted RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms