RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 NUDT11Q96G61 164 aa10.37□□□□□ -0.75
NUP58-206ENST00000463407 PRDM13Q9H4Q3 707 aa10.37□□□□□ -0.75
NUP58-206ENST00000463407 CYSLTR1Q9Y271 337 aa10.37□□□□□ -0.75
NUP58-206ENST00000463407 DEFB130BP0DP73 79 aa10.37□□□□□ -0.75
NUP58-206ENST00000463407 DEFB130AP0DP74 79 aa10.37□□□□□ -0.75
NUP58-206ENST00000463407 TSKUQ8WUA8 353 aa10.37□□□□□ -0.75
NUP58-206ENST00000463407 IGF2-ASQ6U949 168 aa10.36□□□□□ -0.75
NUP58-206ENST00000463407 G3V318 75 aa10.36□□□□□ -0.75
NUP58-206ENST00000463407 DMRTC2Q8IXT2 367 aaPredicted RBP10.36□□□□□ -0.75
NUP58-206ENST00000463407 RPL36AP83881 106 aaKnown RBP10.36□□□□□ -0.75
NUP58-206ENST00000463407 ATRAIDQ6UW56 229 aa10.36□□□□□ -0.75
NUP58-206ENST00000463407 RPL36ALQ969Q0 106 aaKnown RBP10.36□□□□□ -0.75
NUP58-206ENST00000463407 ST6GALNAC6Q969X2 333 aa10.36□□□□□ -0.75
NUP58-206ENST00000463407 SPTBN2O15020 2390 aa10.36□□□□□ -0.75
NUP58-206ENST00000463407 ZNF524Q96C55 264 aa10.36□□□□□ -0.75
NUP58-206ENST00000463407 RNASE2P10153 161 aaKnown RBP10.36□□□□□ -0.75
NUP58-206ENST00000463407 LOXP28300 417 aaPredicted RBP10.36□□□□□ -0.75
NUP58-206ENST00000463407 Q8TAT8 98 aa10.36□□□□□ -0.75
NUP58-206ENST00000463407 SERF1AO75920 110 aa10.35□□□□□ -0.75
NUP58-206ENST00000463407 DEFB104AQ8WTQ1 72 aa10.35□□□□□ -0.75
NUP58-206ENST00000463407 MLANAQ16655 118 aa10.35□□□□□ -0.75
NUP58-206ENST00000463407 C14orf144Q96I85 54 aa10.35□□□□□ -0.75
NUP58-206ENST00000463407 MCRIP2Q9BUT9 160 aaKnown RBP10.35□□□□□ -0.75
NUP58-206ENST00000463407 COL6A6A6NMZ7 2263 aa10.35□□□□□ -0.75
NUP58-206ENST00000463407 TEX36Q5VZQ5 186 aa10.35□□□□□ -0.75
NUP58-206ENST00000463407 TMEM170AQ8WVE7 144 aa10.35□□□□□ -0.75
NUP58-206ENST00000463407 A0A0G2JRQ6 117 aa10.35□□□□□ -0.75
NUP58-206ENST00000463407 SHISA9B4DS77 424 aa10.35□□□□□ -0.75
NUP58-206ENST00000463407 RFNGQ9Y644 331 aa10.35□□□□□ -0.75
NUP58-206ENST00000463407 A0A1W2PPI3 338 aa10.34□□□□□ -0.75
NUP58-206ENST00000463407 C15orf62A8K5M9 175 aa10.34□□□□□ -0.75
NUP58-206ENST00000463407 WDR86Q86TI4 376 aa10.34□□□□□ -0.75
NUP58-206ENST00000463407 TMEM249Q2WGJ8 235 aa10.34□□□□□ -0.75
NUP58-206ENST00000463407 ORMDL2Q53FV1 153 aa10.34□□□□□ -0.75
NUP58-206ENST00000463407 MRPL16Q9NX20 251 aaKnown RBP10.34□□□□□ -0.75
NUP58-206ENST00000463407 FER1L5A0AVI2 2057 aa10.34□□□□□ -0.75
NUP58-206ENST00000463407 ITGB1BP1O14713 200 aa10.34□□□□□ -0.75
NUP58-206ENST00000463407 TCRAP04437 139 aa10.34□□□□□ -0.75
NUP58-206ENST00000463407 C17orf58Q2M2W7 97 aa10.34□□□□□ -0.75
NUP58-206ENST00000463407 FAM120AOSQ5T036 256 aa10.34□□□□□ -0.75
NUP58-206ENST00000463407 AGMATQ9BSE5 352 aa10.34□□□□□ -0.75
NUP58-206ENST00000463407 MED12Q93074 2177 aa10.34□□□□□ -0.75
NUP58-206ENST00000463407 SH2D1AO60880 128 aa10.34□□□□□ -0.75
NUP58-206ENST00000463407 NDUFS7O75251 213 aa10.34□□□□□ -0.75
NUP58-206ENST00000463407 ZNF833PQ6ZTB9 187 aa10.34□□□□□ -0.75
NUP58-206ENST00000463407 GNB1LQ9BYB4 327 aa10.34□□□□□ -0.75
NUP58-206ENST00000463407 NCOR1O75376 2440 aa10.34□□□□□ -0.75
NUP58-206ENST00000463407 HEATR1Q9H583 2144 aaKnown RBP10.34□□□□□ -0.75
NUP58-206ENST00000463407 PLP1P60201 277 aa10.34□□□□□ -0.75
NUP58-206ENST00000463407 ERCC8Q13216 396 aa10.34□□□□□ -0.75
NUP58-206ENST00000463407 PSG3Q16557 428 aa10.34□□□□□ -0.75
NUP58-206ENST00000463407 TMEM190Q8WZ59 177 aa10.34□□□□□ -0.75
NUP58-206ENST00000463407 HELZP42694 1942 aaKnown RBP10.34□□□□□ -0.75
NUP58-206ENST00000463407 NDUFB8O95169 186 aa10.33□□□□□ -0.76
NUP58-206ENST00000463407 ZNF876PQ49A33 203 aa10.33□□□□□ -0.76
NUP58-206ENST00000463407 TTC9CQ8N5M4 171 aa10.33□□□□□ -0.76
NUP58-206ENST00000463407 NXT2Q9NPJ8 142 aaKnown RBP10.33□□□□□ -0.76
NUP58-206ENST00000463407 DMRT1Q9Y5R6 373 aa10.33□□□□□ -0.76
NUP58-206ENST00000463407 CACNA1GO43497 2377 aa10.33□□□□□ -0.76
NUP58-206ENST00000463407 IGLV3-9A0A075B6K5 115 aa10.33□□□□□ -0.76
NUP58-206ENST00000463407 PPBPP02775 128 aa10.33□□□□□ -0.76
NUP58-206ENST00000463407 LINC00614P0C842 121 aa10.33□□□□□ -0.76
NUP58-206ENST00000463407 LMO1P25800 156 aa10.33□□□□□ -0.76
NUP58-206ENST00000463407 HBDP02042 147 aa10.33□□□□□ -0.76
NUP58-206ENST00000463407 CTAG1AP78358 180 aa10.33□□□□□ -0.76
NUP58-206ENST00000463407 XCL2Q9UBD3 114 aa10.33□□□□□ -0.76
NUP58-206ENST00000463407 ACACAQ13085 2346 aa10.33□□□□□ -0.76
NUP58-206ENST00000463407 IGKV1-6A0A0C4DH72 117 aa10.33□□□□□ -0.76
NUP58-206ENST00000463407 CKS1BP61024 79 aa10.32□□□□□ -0.76
NUP58-206ENST00000463407 NRN1Q9NPD7 142 aa10.32□□□□□ -0.76
NUP58-206ENST00000463407 IGFL2Q6UWQ7 119 aa10.32□□□□□ -0.76
NUP58-206ENST00000463407 ATP5L2Q7Z4Y8 100 aa10.32□□□□□ -0.76
NUP58-206ENST00000463407 CHTOPQ9Y3Y2 248 aaKnown RBP10.32□□□□□ -0.76
NUP58-206ENST00000463407 RPP25LQ8N5L8 163 aaKnown RBP10.32□□□□□ -0.76
NUP58-206ENST00000463407 KLF2Q9Y5W3 355 aaPredicted RBP10.32□□□□□ -0.76
NUP58-206ENST00000463407 DERL1Q9BUN8 251 aa10.32□□□□□ -0.76
NUP58-206ENST00000463407 IGHV2-5P01817 119 aa10.32□□□□□ -0.76
NUP58-206ENST00000463407 LYZL1Q6UWQ5 148 aa10.32□□□□□ -0.76
NUP58-206ENST00000463407 LINC00518Q8N0U6 118 aa10.32□□□□□ -0.76
NUP58-206ENST00000463407 LINC00469Q8N7U9 141 aa10.32□□□□□ -0.76
NUP58-206ENST00000463407 IGHV3-64A0A075B6Q5 118 aa10.31□□□□□ -0.76
NUP58-206ENST00000463407 SLC25A20O43772 301 aa10.31□□□□□ -0.76
NUP58-206ENST00000463407 CFHR3Q02985 330 aa10.31□□□□□ -0.76
NUP58-206ENST00000463407 Q6ZRM9 215 aa10.31□□□□□ -0.76
NUP58-206ENST00000463407 TRAV1-1A0A0B4J248 108 aa10.31□□□□□ -0.76
NUP58-206ENST00000463407 DAD1P61803 113 aa10.31□□□□□ -0.76
NUP58-206ENST00000463407 NIT1Q86X76 327 aa10.31□□□□□ -0.76
NUP58-206ENST00000463407 PGPEP1Q9NXJ5 209 aa10.31□□□□□ -0.76
NUP58-206ENST00000463407 GVINP1Q7Z2Y8 2422 aa10.31□□□□□ -0.76
NUP58-206ENST00000463407 SRSF4Q08170 494 aaKnown RBP10.31□□□□□ -0.76
NUP58-206ENST00000463407 DEFB112Q30KQ8 113 aa10.31□□□□□ -0.76
NUP58-206ENST00000463407 F5H768 121 aa10.31□□□□□ -0.76
NUP58-206ENST00000463407 APOC4P55056 127 aa10.31□□□□□ -0.76
NUP58-206ENST00000463407 HOXB4P17483 251 aaPredicted RBP10.3□□□□□ -0.76
NUP58-206ENST00000463407 PLA2G5P39877 138 aa10.3□□□□□ -0.76
NUP58-206ENST00000463407 PRR31Q5SQ13 230 aa10.3□□□□□ -0.76
NUP58-206ENST00000463407 RNF182Q8N6D2 247 aa10.3□□□□□ -0.76
NUP58-206ENST00000463407 MST1LQ2TV78 715 aa10.3□□□□□ -0.76
NUP58-206ENST00000463407 TCTEX1D4Q5JR98 221 aa10.3□□□□□ -0.76
NUP58-206ENST00000463407 OR5A1Q8NGJ0 315 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms