RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 RNF126Q9BV68 326 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 GGACTQ9BVM4 153 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 SLC25A39Q9BZJ4 359 aaPredicted RBP5.24□□□□□ -1.57
PTPRF-210ENST00000463041 SLC25A32Q9H2D1 315 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 GSKIPQ9P0R6 139 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 HIGD1AQ9Y241 93 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 GOLT1BQ9Y3E0 138 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 RFNGQ9Y644 331 aa5.24□□□□□ -1.57
PTPRF-210ENST00000463041 DEFB131BA0A096LNP1 70 aa5.23□□□□□ -1.57
PTPRF-210ENST00000463041 TEX48A0A1B0GUV7 120 aa5.23□□□□□ -1.57
PTPRF-210ENST00000463041 H3BRN7 92 aa5.23□□□□□ -1.57
PTPRF-210ENST00000463041 K7EPK0 472 aa5.23□□□□□ -1.57
PTPRF-210ENST00000463041 LYRM1O43325 122 aa5.23□□□□□ -1.57
PTPRF-210ENST00000463041 AMBPP02760 352 aa5.23□□□□□ -1.57
PTPRF-210ENST00000463041 TCRBP04435 133 aa5.23□□□□□ -1.57
PTPRF-210ENST00000463041 METTL15P1P0C7V9 234 aa5.23□□□□□ -1.57
PTPRF-210ENST00000463041 FXYD7P58549 80 aa5.23□□□□□ -1.57
PTPRF-210ENST00000463041 DEFB1P60022 68 aa5.23□□□□□ -1.57
PTPRF-210ENST00000463041 ZNF846Q147U1 533 aa5.23□□□□□ -1.57
PTPRF-210ENST00000463041 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.23□□□□□ -1.57
PTPRF-210ENST00000463041 LINC00299Q6ZSB3 139 aa5.23□□□□□ -1.57
PTPRF-210ENST00000463041 RPP25LQ8N5L8 163 aaKnown RBP5.23□□□□□ -1.57
PTPRF-210ENST00000463041 ZNF709Q8N972 641 aa5.23□□□□□ -1.57
PTPRF-210ENST00000463041 C20orf173Q96LM9 149 aa5.23□□□□□ -1.57
PTPRF-210ENST00000463041 C17orf77Q96MU5 243 aa5.23□□□□□ -1.57
PTPRF-210ENST00000463041 SHANK2-AS3Q9BTD1 123 aa5.23□□□□□ -1.57
PTPRF-210ENST00000463041 DOK5Q9P104 306 aa5.23□□□□□ -1.57
PTPRF-210ENST00000463041 MGAT4CQ9UBM8 478 aa5.23□□□□□ -1.57
PTPRF-210ENST00000463041 IGHV4-4A0A075B6R2 117 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 IGHV3OR16-12A0A075B7B8 117 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 C7orf66A4D0T2 115 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 F6UB75 175 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 L7N2F9 121 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 GOSR2O14653 212 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 SCGB1D2O95969 90 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 HBE1P02100 147 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 MBPP02686 304 aaPredicted RBP5.22□□□□□ -1.57
PTPRF-210ENST00000463041 OR5G3P0C626 314 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 LINC00869P0C866 280 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 B2MP61769 119 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 RRAS2P62070 204 aaPredicted RBP5.22□□□□□ -1.57
PTPRF-210ENST00000463041 VAMP2P63027 116 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 FGL1Q08830 312 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 PATE2Q6UY27 113 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 C1orf158Q8N1D5 194 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 ZNF431Q8TF32 576 aaPredicted RBP5.22□□□□□ -1.57
PTPRF-210ENST00000463041 FAM210BQ96KR6 192 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 IGF2BP2-AS1Q96M15 143 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 CCDC32Q9BV29 185 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 SCRT1Q9BWW7 348 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 ARL6Q9H0F7 186 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 SLC35B3Q9H1N7 401 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 C20orf85Q9H1P6 137 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 CELA1Q9UNI1 258 aa5.22□□□□□ -1.57
PTPRF-210ENST00000463041 RCL1Q9Y2P8 373 aaKnown RBP5.22□□□□□ -1.57
PTPRF-210ENST00000463041 DNAH17Q9UFH2 4485 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 TRAV6A0A075B6T7 132 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 A0A087X0K7 114 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 TRAV8-2A0A0B4J237 113 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 C5orf51A6NDU8 294 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 AGPAT2O15120 278 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 CCNKO75909 580 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 H2AFB2P0C5Z0 115 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 CNN1P51911 297 aaKnown RBP5.21□□□□□ -1.58
PTPRF-210ENST00000463041 EMP1P54849 157 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 ARL16Q0P5N6 197 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 RAB31Q13636 194 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 OXA1LQ15070 435 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 PSG3Q16557 428 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 RRN3P1Q2M238 152 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 AMTNQ6UX39 209 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 GSG1LQ6UXU4 331 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 ZNF546Q86UE3 836 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 C12orf45Q8N5I9 185 aaPredicted RBP5.21□□□□□ -1.58
PTPRF-210ENST00000463041 LRRC20Q8TCA0 184 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 C2orf50Q96LR7 162 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 NIPSNAP3BQ9BS92 247 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 NDUFAF3Q9BU61 184 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 ARV1Q9H2C2 271 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 DKK2Q9UBU2 259 aa5.21□□□□□ -1.58
PTPRF-210ENST00000463041 LOC102723971A0A1B0GUV8 181 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 FAM240BA0A1B0GVZ2 78 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 FAM25EA8MYX2 175 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 P0DMU3 169 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 FAM231AP0DMU4 169 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 FAM231CP0DMU5 169 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 CXCL2P19875 107 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 CXCL3P19876 107 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 PVALBP20472 110 aaPredicted RBP5.2□□□□□ -1.58
PTPRF-210ENST00000463041 S100A11P31949 105 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 BCAP31P51572 246 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 PRR20EP86478 221 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 PRR20CP86479 221 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 PRR20DP86480 221 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 PRR20BP86481 221 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 PRR20AP86496 221 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 SLC38A11Q08AI6 406 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 FAM222AQ5U5X8 452 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 IGFL4Q6B9Z1 124 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 MZT2BQ6NZ67 158 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms