RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 SEC16AO15027 2179 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 A0A087X0K7 114 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 TRAV8-1A0A0A6YYK1 113 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 IGHV1-3A0A0C4DH29 117 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 C7orf71A4D174 169 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 TMEM189A5PLL7 270 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 BUB1B-PAK6H3BSN5 160 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 I3L2K1 104 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 K7EM74 188 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 TNFRSF13BO14836 293 aaPredicted RBP2.79□□□□□ -1.96
COL8A1-204ENST00000462604 IGLV2-11P01706 119 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 HBDP02042 147 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 APELAP0DMC3 54 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 COX7A1P24310 79 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 CD24P25063 80 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 CNTFRP26992 372 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 APOBEC3AP31941 199 aaPredicted RBP2.79□□□□□ -1.96
COL8A1-204ENST00000462604 BMI1P35226 326 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 ZNF138P52744 262 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 MRGPRG-AS1Q2M3A8 158 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 LGALS9BQ3B8N2 356 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 OCIAD2Q56VL3 154 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 TMEM97Q5BJF2 176 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 LDLRAD2Q5SZI1 272 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 SAMD5Q5TGI4 173 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 AMMECR1LQ6DCA0 310 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 LGALS9CQ6DKI2 356 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 SIGLEC15Q6ZMC9 328 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 ZNF493Q6ZR52 646 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 ERASQ7Z444 233 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 LHFPL4Q7Z7J7 247 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 ORMDL3Q8N138 153 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 EXOC3-AS1Q8N2X6 119 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 OR4X2Q8NGF9 303 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 OR8A1Q8NGG7 326 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 RNF125Q96EQ8 232 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 ZC2HC1AQ96GY0 325 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 ZNF414Q96IQ9 312 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 RITA1Q96K30 269 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 PRELID3AQ96N28 172 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 COL25A1Q9BXS0 654 aaPredicted RBP2.79□□□□□ -1.96
COL8A1-204ENST00000462604 FBXL15Q9H469 300 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 CST9LQ9H4G1 147 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 RALYQ9UKM9 306 aaKnown RBP2.79□□□□□ -1.96
COL8A1-204ENST00000462604 U3KQK5 164 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 NCOA6Q14686 2063 aaPredicted RBP2.79□□□□□ -1.96
COL8A1-204ENST00000462604 EML6Q6ZMW3 1958 aa2.79□□□□□ -1.96
COL8A1-204ENST00000462604 UNC13CQ8NB66 2214 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 COL27A1Q8IZC6 1860 aaPredicted RBP2.78□□□□□ -1.96
COL8A1-204ENST00000462604 PPIAL4CA0A0B4J2A2 164 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 A0A0G2JNJ9 132 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 WI2-2373I1.2A0A1W2PRP0 233 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 A1L4Q6 167 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 GAGE10A6NGK3 116 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 C9orf118A6NHY6 69 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 D6R8Y8 96 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 H3BRM9 83 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 K7EIM0 57 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 ZNF561-AS1K7EIQ3 104 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 K7EP34 96 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 SIVA1O15304 175 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 NBR2O15453 112 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 GNG7O60262 68 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 SH2D1AO60880 128 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 FCN3O75636 299 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 NCR2O95944 276 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 IGKV1-17P01599 117 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 IGLV1-47P01700 117 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 IL4P05112 153 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 THBDP07204 575 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 PPIAL4GP0DN37 164 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 RPL7P18124 248 aaKnown RBP2.78□□□□□ -1.96
COL8A1-204ENST00000462604 CEACAM3P40198 252 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 IFI27P40305 119 aaPredicted RBP2.78□□□□□ -1.96
COL8A1-204ENST00000462604 UQCRFS1P47985 274 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 MFAP4P55083 255 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 CACNG7P62955 275 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 KIR3DS1Q14943 382 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 FAM104BQ5XKR9 115 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 RUSC1-AS1Q66K80 236 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 LYZL1Q6UWQ5 148 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 GFRALQ6UXV0 394 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 C2orf91Q6ZV80 131 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 FER1L6-AS1Q8NA97 138 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 PRSS33Q8NF86 280 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 OR5A1Q8NGJ0 315 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 NEU4Q8WWR8 484 aaPredicted RBP2.78□□□□□ -1.96
COL8A1-204ENST00000462604 RNASE6Q93091 150 aaKnown RBP2.78□□□□□ -1.96
COL8A1-204ENST00000462604 IFI27L1Q96BM0 104 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 C16orf92Q96LL3 132 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 ZNF48Q96MX3 618 aaPredicted RBP2.78□□□□□ -1.96
COL8A1-204ENST00000462604 MCRIP2Q9BUT9 160 aaKnown RBP2.78□□□□□ -1.96
COL8A1-204ENST00000462604 NPFFR1Q9GZQ6 430 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 MAP1LC3AQ9H492 121 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 SIGLEC8Q9NYZ4 499 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 THYN1Q9P016 225 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 ONECUT1Q9UBC0 465 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 TP73-AS1Q9UF72 201 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 Q9UFV3 132 aa2.78□□□□□ -1.96
COL8A1-204ENST00000462604 RABAC1Q9UI14 185 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 551.3 ms