RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 BIRC6Q9NR09 4857 aa16.4■□□□□ 0.22
TRAF4-207ENST00000461195 SIX6O95475 246 aa16.39■□□□□ 0.21
TRAF4-207ENST00000461195 SULT1A1P50225 295 aa16.39■□□□□ 0.21
TRAF4-207ENST00000461195 FOXI2Q6ZQN5 318 aa16.39■□□□□ 0.21
TRAF4-207ENST00000461195 STX12Q86Y82 276 aa16.39■□□□□ 0.21
TRAF4-207ENST00000461195 TMEM252Q8N6L7 170 aa16.39■□□□□ 0.21
TRAF4-207ENST00000461195 MGST2Q99735 147 aa16.39■□□□□ 0.21
TRAF4-207ENST00000461195 SAV1Q9H4B6 383 aaPredicted RBP16.39■□□□□ 0.21
TRAF4-207ENST00000461195 LCE6AA0A183 80 aa16.38■□□□□ 0.21
TRAF4-207ENST00000461195 IGSF23A1L1A6 192 aa16.38■□□□□ 0.21
TRAF4-207ENST00000461195 CXorf65A6NEN9 183 aa16.38■□□□□ 0.21
TRAF4-207ENST00000461195 RPL7P18124 248 aaKnown RBP16.38■□□□□ 0.21
TRAF4-207ENST00000461195 S100A11P31949 105 aa16.38■□□□□ 0.21
TRAF4-207ENST00000461195 RAB31Q13636 194 aa16.38■□□□□ 0.21
TRAF4-207ENST00000461195 GDF5OSQ5U4N7 250 aa16.38■□□□□ 0.21
TRAF4-207ENST00000461195 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.38■□□□□ 0.21
TRAF4-207ENST00000461195 C17orf77Q96MU5 243 aa16.38■□□□□ 0.21
TRAF4-207ENST00000461195 UHRF2Q96PU4 802 aa16.38■□□□□ 0.21
TRAF4-207ENST00000461195 C1QTNF4Q9BXJ3 329 aa16.38■□□□□ 0.21
TRAF4-207ENST00000461195 NMES1Q9C002 83 aa16.38■□□□□ 0.21
TRAF4-207ENST00000461195 ARV1Q9H2C2 271 aa16.38■□□□□ 0.21
TRAF4-207ENST00000461195 C11orf68Q9H3H3 251 aaKnown RBP16.38■□□□□ 0.21
TRAF4-207ENST00000461195 UQCC1Q9NVA1 299 aa16.38■□□□□ 0.21
TRAF4-207ENST00000461195 RNF24Q9Y225 148 aa16.38■□□□□ 0.21
TRAF4-207ENST00000461195 DNAH1Q9P2D7 4330 aa16.37■□□□□ 0.21
TRAF4-207ENST00000461195 DEFB1P60022 68 aa16.37■□□□□ 0.21
TRAF4-207ENST00000461195 HBG1P69891 147 aa16.37■□□□□ 0.21
TRAF4-207ENST00000461195 HBG2P69892 147 aa16.37■□□□□ 0.21
TRAF4-207ENST00000461195 PMS2P11Q13670 270 aa16.37■□□□□ 0.21
TRAF4-207ENST00000461195 SPATA31B1PQ5VZV4 182 aa16.37■□□□□ 0.21
TRAF4-207ENST00000461195 PATE2Q6UY27 113 aa16.37■□□□□ 0.21
TRAF4-207ENST00000461195 RPRMQ9NS64 109 aa16.37■□□□□ 0.21
TRAF4-207ENST00000461195 CLEC5AQ9NY25 188 aa16.37■□□□□ 0.21
TRAF4-207ENST00000461195 RLN2P04090 185 aa16.36■□□□□ 0.21
TRAF4-207ENST00000461195 CAMLGP49069 296 aa16.36■□□□□ 0.21
TRAF4-207ENST00000461195 CYCSP99999 105 aaKnown RBP16.36■□□□□ 0.21
TRAF4-207ENST00000461195 VWC2Q2TAL6 325 aa16.36■□□□□ 0.21
TRAF4-207ENST00000461195 EBLN2Q6P2I7 272 aa16.36■□□□□ 0.21
TRAF4-207ENST00000461195 CSNK1G2-AS1Q8NCQ2 148 aa16.36■□□□□ 0.21
TRAF4-207ENST00000461195 WDR83OSQ9Y284 106 aa16.36■□□□□ 0.21
TRAF4-207ENST00000461195 C20orf173Q96LM9 149 aa16.35■□□□□ 0.21
TRAF4-207ENST00000461195 CLUHP3Q96NS8 147 aa16.35■□□□□ 0.21
TRAF4-207ENST00000461195 XCL2Q9UBD3 114 aa16.35■□□□□ 0.21
TRAF4-207ENST00000461195 ZNF705EA8MWA4 302 aaPredicted RBP16.34■□□□□ 0.21
TRAF4-207ENST00000461195 SSNA1O43805 119 aa16.34■□□□□ 0.21
TRAF4-207ENST00000461195 COX7A2P2O60397 106 aa16.34■□□□□ 0.21
TRAF4-207ENST00000461195 IGKV3-20P01619 116 aa16.34■□□□□ 0.21
TRAF4-207ENST00000461195 FGL1Q08830 312 aa16.34■□□□□ 0.21
TRAF4-207ENST00000461195 ATP6V1FQ16864 119 aa16.34■□□□□ 0.21
TRAF4-207ENST00000461195 LINC00305Q7Z4B0 112 aa16.34■□□□□ 0.21
TRAF4-207ENST00000461195 OR4B1Q8NGF8 309 aa16.34■□□□□ 0.21
TRAF4-207ENST00000461195 ELOA3CA0A087WX78 387 aaPredicted RBP16.33■□□□□ 0.2
TRAF4-207ENST00000461195 UBE2L5PA0A1B0GUS4 154 aa16.33■□□□□ 0.2
TRAF4-207ENST00000461195 NUPR2A6NF83 97 aa16.33■□□□□ 0.2
TRAF4-207ENST00000461195 E5RGE8 158 aa16.33■□□□□ 0.2
TRAF4-207ENST00000461195 DEFB4AO15263 64 aa16.33■□□□□ 0.2
TRAF4-207ENST00000461195 MIFP14174 115 aa16.33■□□□□ 0.2
TRAF4-207ENST00000461195 LRRC37A5PQ49AS3 106 aa16.33■□□□□ 0.2
TRAF4-207ENST00000461195 Q6ZRG5 221 aa16.33■□□□□ 0.2
TRAF4-207ENST00000461195 Q8NAQ8 132 aa16.33■□□□□ 0.2
TRAF4-207ENST00000461195 A0A087X0K7 114 aa16.32■□□□□ 0.2
TRAF4-207ENST00000461195 A0A0J9YX75 114 aa16.32■□□□□ 0.2
TRAF4-207ENST00000461195 F6UB75 175 aa16.32■□□□□ 0.2
TRAF4-207ENST00000461195 H2BFSP57053 126 aa16.32■□□□□ 0.2
TRAF4-207ENST00000461195 BAXQ07812 192 aa16.32■□□□□ 0.2
TRAF4-207ENST00000461195 C10orf113Q5VZT2 155 aa16.32■□□□□ 0.2
TRAF4-207ENST00000461195 C11orf45Q8TAV5 145 aa16.32■□□□□ 0.2
TRAF4-207ENST00000461195 TMEM37Q8WXS4 190 aa16.32■□□□□ 0.2
TRAF4-207ENST00000461195 SLC25A31Q9H0C2 315 aa16.32■□□□□ 0.2
TRAF4-207ENST00000461195 OR5AC2Q9NZP5 309 aa16.32■□□□□ 0.2
TRAF4-207ENST00000461195 X6R8D5 127 aa16.32■□□□□ 0.2
TRAF4-207ENST00000461195 TRAV8-2A0A0B4J237 113 aa16.31■□□□□ 0.2
TRAF4-207ENST00000461195 IGHV4-28A0A0C4DH34 117 aa16.31■□□□□ 0.2
TRAF4-207ENST00000461195 JTBO76095 146 aa16.31■□□□□ 0.2
TRAF4-207ENST00000461195 PRR20EP86478 221 aa16.31■□□□□ 0.2
TRAF4-207ENST00000461195 PRR20CP86479 221 aa16.31■□□□□ 0.2
TRAF4-207ENST00000461195 PRR20DP86480 221 aa16.31■□□□□ 0.2
TRAF4-207ENST00000461195 PRR20BP86481 221 aa16.31■□□□□ 0.2
TRAF4-207ENST00000461195 PRR20AP86496 221 aa16.31■□□□□ 0.2
TRAF4-207ENST00000461195 FAM78BQ5VT40 261 aa16.31■□□□□ 0.2
TRAF4-207ENST00000461195 MIC13Q5XKP0 118 aa16.31■□□□□ 0.2
TRAF4-207ENST00000461195 CEMP1Q6PRD7 247 aaPredicted RBP16.31■□□□□ 0.2
TRAF4-207ENST00000461195 MFFQ9GZY8 342 aa16.31■□□□□ 0.2
TRAF4-207ENST00000461195 DNAJC4Q9NNZ3 241 aa16.31■□□□□ 0.2
TRAF4-207ENST00000461195 FGF7P21781 194 aa16.3■□□□□ 0.2
TRAF4-207ENST00000461195 RPL29P47914 159 aaKnown RBP16.3■□□□□ 0.2
TRAF4-207ENST00000461195 FXYD7P58549 80 aa16.3■□□□□ 0.2
TRAF4-207ENST00000461195 PSG9Q00887 426 aa16.3■□□□□ 0.2
TRAF4-207ENST00000461195 NHLH2Q02577 135 aa16.3■□□□□ 0.2
TRAF4-207ENST00000461195 IGFL4Q6B9Z1 124 aa16.3■□□□□ 0.2
TRAF4-207ENST00000461195 OR1L4Q8NGR5 311 aa16.3■□□□□ 0.2
TRAF4-207ENST00000461195 CHAC2Q8WUX2 184 aa16.3■□□□□ 0.2
TRAF4-207ENST00000461195 H0YIZ8 118 aa16.29■□□□□ 0.2
TRAF4-207ENST00000461195 MRPS12O15235 138 aaKnown RBP16.29■□□□□ 0.2
TRAF4-207ENST00000461195 MPDU1O75352 247 aa16.29■□□□□ 0.2
TRAF4-207ENST00000461195 RBMY1A1P0DJD3 496 aaKnown RBP16.29■□□□□ 0.2
TRAF4-207ENST00000461195 RBMY1CP0DJD4 496 aa16.29■□□□□ 0.2
TRAF4-207ENST00000461195 NANOS2P60321 138 aaKnown RBP16.29■□□□□ 0.2
TRAF4-207ENST00000461195 OPCMLQ14982 345 aa16.29■□□□□ 0.2
TRAF4-207ENST00000461195 RBMY1FQ15415 496 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms