RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 SLC25A22Q9H936 323 aa13.4□□□□□ -0.26
COL9A2-205ENST00000461118 HIGD1AQ9Y241 93 aa13.4□□□□□ -0.26
COL9A2-205ENST00000461118 CXorf65A6NEN9 183 aa13.39□□□□□ -0.27
COL9A2-205ENST00000461118 NUPR2A6NF83 97 aa13.39□□□□□ -0.27
COL9A2-205ENST00000461118 AGPAT2O15120 278 aa13.39□□□□□ -0.27
COL9A2-205ENST00000461118 SULT1A1P50225 295 aa13.39□□□□□ -0.27
COL9A2-205ENST00000461118 S100A10P60903 97 aa13.39□□□□□ -0.27
COL9A2-205ENST00000461118 CEMP1Q6PRD7 247 aaPredicted RBP13.39□□□□□ -0.27
COL9A2-205ENST00000461118 S100A7AQ86SG5 101 aa13.39□□□□□ -0.27
COL9A2-205ENST00000461118 ZNF546Q86UE3 836 aa13.39□□□□□ -0.27
COL9A2-205ENST00000461118 TMEM217Q8N7C4 229 aa13.39□□□□□ -0.27
COL9A2-205ENST00000461118 RSG1Q9BU20 258 aa13.39□□□□□ -0.27
COL9A2-205ENST00000461118 VPS13DQ5THJ4 4388 aa13.38□□□□□ -0.27
COL9A2-205ENST00000461118 GOSR2O14653 212 aa13.38□□□□□ -0.27
COL9A2-205ENST00000461118 CST7O76096 145 aa13.38□□□□□ -0.27
COL9A2-205ENST00000461118 HLA-DRB4P13762 266 aa13.38□□□□□ -0.27
COL9A2-205ENST00000461118 C4BPBP20851 252 aa13.38□□□□□ -0.27
COL9A2-205ENST00000461118 S100A11P31949 105 aa13.38□□□□□ -0.27
COL9A2-205ENST00000461118 NUTF2P61970 127 aaKnown RBP13.38□□□□□ -0.27
COL9A2-205ENST00000461118 VWC2Q2TAL6 325 aa13.38□□□□□ -0.27
COL9A2-205ENST00000461118 PATE2Q6UY27 113 aa13.38□□□□□ -0.27
COL9A2-205ENST00000461118 TMEM252Q8N6L7 170 aa13.38□□□□□ -0.27
COL9A2-205ENST00000461118 CSNK1G2-AS1Q8NCQ2 148 aa13.38□□□□□ -0.27
COL9A2-205ENST00000461118 LINC00052Q96N35 136 aa13.38□□□□□ -0.27
COL9A2-205ENST00000461118 CLUHP3Q96NS8 147 aa13.38□□□□□ -0.27
COL9A2-205ENST00000461118 SCRT1Q9BWW7 348 aa13.38□□□□□ -0.27
COL9A2-205ENST00000461118 NMES1Q9C002 83 aa13.38□□□□□ -0.27
COL9A2-205ENST00000461118 ARL6Q9H0F7 186 aa13.38□□□□□ -0.27
COL9A2-205ENST00000461118 SAV1Q9H4B6 383 aaPredicted RBP13.38□□□□□ -0.27
COL9A2-205ENST00000461118 DOK5Q9P104 306 aa13.38□□□□□ -0.27
COL9A2-205ENST00000461118 HLA-DRB4X5D2U9 266 aa13.38□□□□□ -0.27
COL9A2-205ENST00000461118 SIX6O95475 246 aa13.37□□□□□ -0.27
COL9A2-205ENST00000461118 OR5G3P0C626 314 aa13.37□□□□□ -0.27
COL9A2-205ENST00000461118 CYCSP99999 105 aaKnown RBP13.37□□□□□ -0.27
COL9A2-205ENST00000461118 SPATA31B1PQ5VZV4 182 aa13.37□□□□□ -0.27
COL9A2-205ENST00000461118 FOXI2Q6ZQN5 318 aa13.37□□□□□ -0.27
COL9A2-205ENST00000461118 MGST2Q99735 147 aa13.37□□□□□ -0.27
COL9A2-205ENST00000461118 C11orf68Q9H3H3 251 aaKnown RBP13.37□□□□□ -0.27
COL9A2-205ENST00000461118 RNF24Q9Y225 148 aa13.37□□□□□ -0.27
COL9A2-205ENST00000461118 WDR83OSQ9Y284 106 aa13.37□□□□□ -0.27
COL9A2-205ENST00000461118 IGSF23A1L1A6 192 aa13.36□□□□□ -0.27
COL9A2-205ENST00000461118 RPL7P18124 248 aaKnown RBP13.36□□□□□ -0.27
COL9A2-205ENST00000461118 HBG1P69891 147 aa13.36□□□□□ -0.27
COL9A2-205ENST00000461118 HBG2P69892 147 aa13.36□□□□□ -0.27
COL9A2-205ENST00000461118 RAB31Q13636 194 aa13.36□□□□□ -0.27
COL9A2-205ENST00000461118 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.36□□□□□ -0.27
COL9A2-205ENST00000461118 STX12Q86Y82 276 aa13.36□□□□□ -0.27
COL9A2-205ENST00000461118 C16orf92Q96LL3 132 aa13.36□□□□□ -0.27
COL9A2-205ENST00000461118 UHRF2Q96PU4 802 aa13.36□□□□□ -0.27
COL9A2-205ENST00000461118 C1QTNF4Q9BXJ3 329 aa13.36□□□□□ -0.27
COL9A2-205ENST00000461118 ARV1Q9H2C2 271 aa13.36□□□□□ -0.27
COL9A2-205ENST00000461118 UQCC1Q9NVA1 299 aa13.36□□□□□ -0.27
COL9A2-205ENST00000461118 ZNF705EA8MWA4 302 aaPredicted RBP13.35□□□□□ -0.27
COL9A2-205ENST00000461118 RLN2P04090 185 aa13.35□□□□□ -0.27
COL9A2-205ENST00000461118 CAMLGP49069 296 aa13.35□□□□□ -0.27
COL9A2-205ENST00000461118 ATP6V1FQ16864 119 aa13.35□□□□□ -0.27
COL9A2-205ENST00000461118 GDF5OSQ5U4N7 250 aa13.35□□□□□ -0.27
COL9A2-205ENST00000461118 CHAC2Q8WUX2 184 aa13.35□□□□□ -0.27
COL9A2-205ENST00000461118 RPRMQ9NS64 109 aa13.35□□□□□ -0.27
COL9A2-205ENST00000461118 ELOA3CA0A087WX78 387 aaPredicted RBP13.34□□□□□ -0.27
COL9A2-205ENST00000461118 DEFB1P60022 68 aa13.34□□□□□ -0.27
COL9A2-205ENST00000461118 A0A087X0K7 114 aa13.33□□□□□ -0.28
COL9A2-205ENST00000461118 A0A0J9YX75 114 aa13.33□□□□□ -0.28
COL9A2-205ENST00000461118 E5RGE8 158 aa13.33□□□□□ -0.28
COL9A2-205ENST00000461118 H2BFSP57053 126 aa13.33□□□□□ -0.28
COL9A2-205ENST00000461118 PRR20EP86478 221 aa13.33□□□□□ -0.28
COL9A2-205ENST00000461118 PRR20CP86479 221 aa13.33□□□□□ -0.28
COL9A2-205ENST00000461118 PRR20DP86480 221 aa13.33□□□□□ -0.28
COL9A2-205ENST00000461118 PRR20BP86481 221 aa13.33□□□□□ -0.28
COL9A2-205ENST00000461118 PRR20AP86496 221 aa13.33□□□□□ -0.28
COL9A2-205ENST00000461118 EBLN2Q6P2I7 272 aa13.33□□□□□ -0.28
COL9A2-205ENST00000461118 LINC00305Q7Z4B0 112 aa13.33□□□□□ -0.28
COL9A2-205ENST00000461118 Q8NAQ8 132 aa13.33□□□□□ -0.28
COL9A2-205ENST00000461118 TMEM37Q8WXS4 190 aa13.33□□□□□ -0.28
COL9A2-205ENST00000461118 C20orf173Q96LM9 149 aa13.33□□□□□ -0.28
COL9A2-205ENST00000461118 DNAH6Q9C0G6 4158 aa13.32□□□□□ -0.28
COL9A2-205ENST00000461118 TRAV8-2A0A0B4J237 113 aa13.32□□□□□ -0.28
COL9A2-205ENST00000461118 H0YIZ8 118 aa13.32□□□□□ -0.28
COL9A2-205ENST00000461118 MRPS12O15235 138 aaKnown RBP13.32□□□□□ -0.28
COL9A2-205ENST00000461118 MIFP14174 115 aa13.32□□□□□ -0.28
COL9A2-205ENST00000461118 RPL29P47914 159 aaKnown RBP13.32□□□□□ -0.28
COL9A2-205ENST00000461118 Q6ZRG5 221 aa13.32□□□□□ -0.28
COL9A2-205ENST00000461118 SLC25A31Q9H0C2 315 aa13.32□□□□□ -0.28
COL9A2-205ENST00000461118 CLEC5AQ9NY25 188 aa13.32□□□□□ -0.28
COL9A2-205ENST00000461118 X6R8D5 127 aa13.32□□□□□ -0.28
COL9A2-205ENST00000461118 RYR1P21817 5038 aa13.32□□□□□ -0.28
COL9A2-205ENST00000461118 A8MTW9 85 aa13.31□□□□□ -0.28
COL9A2-205ENST00000461118 SSNA1O43805 119 aa13.31□□□□□ -0.28
COL9A2-205ENST00000461118 COX7A2P2O60397 106 aa13.31□□□□□ -0.28
COL9A2-205ENST00000461118 NHLH2Q02577 135 aa13.31□□□□□ -0.28
COL9A2-205ENST00000461118 LGALS9CQ6DKI2 356 aa13.31□□□□□ -0.28
COL9A2-205ENST00000461118 DNAJC4Q9NNZ3 241 aa13.31□□□□□ -0.28
COL9A2-205ENST00000461118 OR5AC2Q9NZP5 309 aa13.31□□□□□ -0.28
COL9A2-205ENST00000461118 XCL2Q9UBD3 114 aa13.31□□□□□ -0.28
COL9A2-205ENST00000461118 UBE2L5PA0A1B0GUS4 154 aa13.3□□□□□ -0.28
COL9A2-205ENST00000461118 F6UB75 175 aa13.3□□□□□ -0.28
COL9A2-205ENST00000461118 MPDU1O75352 247 aa13.3□□□□□ -0.28
COL9A2-205ENST00000461118 LRRC37A5PQ49AS3 106 aa13.3□□□□□ -0.28
COL9A2-205ENST00000461118 FAM78BQ5VT40 261 aa13.3□□□□□ -0.28
COL9A2-205ENST00000461118 C10orf113Q5VZT2 155 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms