RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 RNF125Q96EQ8 232 aa4.53□□□□□ -1.68
NUP98-208ENST00000461047 NEURL2Q9BR09 285 aa4.53□□□□□ -1.68
NUP98-208ENST00000461047 ZNF471Q9BX82 626 aaPredicted RBP4.53□□□□□ -1.68
NUP98-208ENST00000461047 ARL6Q9H0F7 186 aa4.53□□□□□ -1.68
NUP98-208ENST00000461047 SLC39A9Q9NUM3 307 aa4.53□□□□□ -1.68
NUP98-208ENST00000461047 SIGLEC8Q9NYZ4 499 aa4.53□□□□□ -1.68
NUP98-208ENST00000461047 SMPXQ9UHP9 88 aa4.53□□□□□ -1.68
NUP98-208ENST00000461047 HIGD1AQ9Y241 93 aa4.53□□□□□ -1.68
NUP98-208ENST00000461047 LSM4Q9Y4Z0 139 aaKnown RBP4.53□□□□□ -1.68
NUP98-208ENST00000461047 TIMM9Q9Y5J7 89 aa4.53□□□□□ -1.68
NUP98-208ENST00000461047 TRAV25A0A0B4J276 109 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 IGHV7-4-1A0A0J9YVY3 117 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 A0A1W2PPV4 95 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 WI2-2373I1.2A0A1W2PRP0 233 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 RNF222A6NCQ9 220 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 C2orf70A6NJV1 201 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 BCL2L11O43521 198 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 FOLR2P14207 255 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 CRYBB3P26998 211 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 GALR1P47211 349 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 MEOX2P50222 304 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 TAS2R45P59539 299 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 PLP1P60201 277 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 B2MP61769 119 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 OPCMLQ14982 345 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 FFAR4Q5NUL3 377 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 LCN12Q6JVE5 192 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 OR8I2Q8N0Y5 310 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 HSD17B11Q8NBQ5 300 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 STXBP6Q8NFX7 210 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 OR2G3Q8NGZ4 309 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 LINC00476Q8WZB0 136 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 MGST2Q99735 147 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 PSMG3Q9BT73 122 aaPredicted RBP4.52□□□□□ -1.69
NUP98-208ENST00000461047 RHPN1-AS1Q9BWJ2 59 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 NPCDR1Q9BY65 106 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 MRPL36Q9P0J6 103 aaKnown RBP4.52□□□□□ -1.69
NUP98-208ENST00000461047 PXMP4Q9Y6I8 212 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 TNCP24821 2201 aa4.52□□□□□ -1.69
NUP98-208ENST00000461047 ATRQ13535 2644 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 IGKV1D-37A0A075B6S9 117 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 IGKV1OR2-108A0A075B7D4 117 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 OR4C46A6NHA9 309 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 ZNF785A8K8V0 405 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 UMAD1C9J7I0 102 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 TEX46H3BTG2 121 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 DNASE2O00115 360 aaPredicted RBP4.51□□□□□ -1.69
NUP98-208ENST00000461047 ZNF207O43670 478 aaKnown RBP4.51□□□□□ -1.69
NUP98-208ENST00000461047 C8orf88P0DMB2 117 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 RPL7P18124 248 aaKnown RBP4.51□□□□□ -1.69
NUP98-208ENST00000461047 ID1P41134 155 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 RAB2AP61019 212 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 RHOBP62745 196 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 TOR2AQ5JU69 321 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 AKR1C8PQ5T2L2 129 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 MIC13Q5XKP0 118 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 RPL7L1Q6DKI1 246 aaKnown RBP4.51□□□□□ -1.69
NUP98-208ENST00000461047 HIST2H2BDQ6DRA6 164 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 UNQ9165/PRO28630Q6UXU0 137 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 SLC51BQ86UW2 128 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 BPIFA4PQ86YQ2 179 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 BAP18Q8IXM2 172 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 OR11H4Q8NGC9 324 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 STOML3Q8TAV4 291 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 LRRC20Q8TCA0 184 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 GGTLC1Q9BX51 225 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 MRPL32Q9BYC8 188 aaKnown RBP4.51□□□□□ -1.69
NUP98-208ENST00000461047 ACTR3CQ9C0K3 210 aaPredicted RBP4.51□□□□□ -1.69
NUP98-208ENST00000461047 ARV1Q9H2C2 271 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 DKK2Q9UBU2 259 aa4.51□□□□□ -1.69
NUP98-208ENST00000461047 TET2Q6N021 2002 aaPredicted RBP4.5□□□□□ -1.69
NUP98-208ENST00000461047 IGHV3OR16-8A0A075B7F1 116 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 TMEM213A2RRL7 107 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 G3V3Q6 166 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 CHEK1O14757 476 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 PLXNB1O43157 2135 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 CSN3P07498 182 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 SEC11BP0C7V7 166 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 IGLL1P15814 213 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 CXCL2P19875 107 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 M6PRP20645 277 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 GATA2P23769 480 aaPredicted RBP4.5□□□□□ -1.69
NUP98-208ENST00000461047 ATP6V0CP27449 155 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 RAB5CP51148 216 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 FOXI1Q12951 378 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 GUCA2BQ16661 112 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 DEFB114Q30KQ6 69 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 LGALSLQ3ZCW2 172 aaPredicted RBP4.5□□□□□ -1.69
NUP98-208ENST00000461047 FAM78BQ5VT40 261 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 DPPA3Q6W0C5 159 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 SIGLEC15Q6ZMC9 328 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 TCF24Q7RTU0 167 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 LINC00305Q7Z4B0 112 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 GTSCR1Q86UQ5 136 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 OR10G4Q8NGN3 311 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 OR10G9Q8NGN4 311 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 OR10G7Q8NGN6 311 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 NEU1Q99519 415 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 SHANK2-AS3Q9BTD1 123 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 RSG1Q9BU20 258 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms