RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 JOSD1Q15040 202 aaPredicted RBP1.86□□□□□ -2.11
HPS3-203ENST00000460822 ABCA11PQ4W5N1 156 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 Q5W150 140 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 OR2T2Q6IF00 324 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 TCF23Q7RTU1 214 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 ZNF550Q7Z398 422 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 LYPD6Q86Y78 171 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 ZNF101Q8IZC7 436 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 ZNF664Q8N3J9 261 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 LRRC18Q8N456 261 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 TMEM75Q8N9X5 138 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 OR51A2Q8NGJ7 313 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 OR13D1Q8NGV5 346 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 OR2V1Q8NHB1 315 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 OTOSQ8NHW6 89 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 FRZBQ92765 325 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 APOBEC3DQ96AK3 386 aaPredicted RBP1.86□□□□□ -2.11
HPS3-203ENST00000460822 CMBLQ96DG6 245 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 REEP6Q96HR9 211 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 C2orf50Q96LR7 162 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 GPR82Q96P67 336 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 HIST1H2BLQ99880 126 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 PBDC1Q9BVG4 233 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 DDA1Q9BW61 102 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 TXNIPQ9H3M7 391 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 C19orf12Q9NSK7 152 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 TMEM38BQ9NVV0 291 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 CKLFQ9UBR5 152 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 ANAPC10Q9UM13 185 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 COL5A1P20908 1838 aaPredicted RBP1.86□□□□□ -2.11
HPS3-203ENST00000460822 RANBP2P49792 3224 aaKnown RBP1.86□□□□□ -2.11
HPS3-203ENST00000460822 SZT2Q5T011 3432 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 THADAQ6YHU6 1953 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 EXPH5Q8NEV8 1989 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 VCANP13611 3396 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 IGKV1D-42A0A075B6H8 117 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 IGHV1-3A0A0C4DH29 117 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 TMEM269A0A1B0GVZ9 245 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 TLCD2A6NGC4 264 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 TMEM238C9JI98 176 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 H3BQ15 152 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 K7EQS6 105 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 CYB5BO43169 146 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 DLEU1O43261 78 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 DEDDO75618 318 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 CNIH1O95406 144 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 LINC00869P0C866 280 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 CYBAP13498 195 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 CPMP14384 443 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 ZNF25P17030 456 aaPredicted RBP1.85□□□□□ -2.11
HPS3-203ENST00000460822 PEBP1P30086 187 aaKnown RBP1.85□□□□□ -2.11
HPS3-203ENST00000460822 CD200P41217 278 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 GABRA4P48169 554 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 PSMB3P49720 205 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 TMEM33P57088 247 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 BTN3A2P78410 334 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 QRFPP83859 136 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 TMEM267Q0VDI3 215 aaPredicted RBP1.85□□□□□ -2.11
HPS3-203ENST00000460822 AKR1C8PQ5T2L2 129 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 HES3Q5TGS1 186 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 AADACL3Q5VUY0 350 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 ATP5L2Q7Z4Y8 100 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 LHFPL1Q86WI0 220 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 TMEM86BQ8N661 226 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 Q8N7P7 452 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 OR4K15Q8NH41 348 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 OR10J5Q8NHC4 309 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 TERB2Q8NHR7 220 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 SLC25A44Q96H78 314 aaPredicted RBP1.85□□□□□ -2.11
HPS3-203ENST00000460822 ACY3Q96HD9 319 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 COX14Q96I36 57 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 TSPAN32Q96QS1 320 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 GINS3Q9BRX5 216 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 SNHG12Q9BXW3 62 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 SMIM3Q9BZL3 60 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 TCEAL2Q9H3H9 227 aaPredicted RBP1.85□□□□□ -2.11
HPS3-203ENST00000460822 SMDT1Q9H4I9 107 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 HES4Q9HCC6 221 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 ATG2BQ96BY7 2078 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 LRP4O75096 1905 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 RP1P56715 2156 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 NCOA6Q14686 2063 aaPredicted RBP1.85□□□□□ -2.11
HPS3-203ENST00000460822 DOCK11Q5JSL3 2073 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 PTPRSQ13332 1948 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 SHANK1Q9Y566 2161 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 BORCS7-ASMTA0A0B4J1R7 106 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 A0A1B0GV50 99 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 LOC107986453A0A1B0GWG9 222 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 C5orf49A4QMS7 147 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 TMEM14DPA8MWL7 114 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 GEMIN2O14893 280 aaKnown RBP1.85□□□□□ -2.11
HPS3-203ENST00000460822 PRH1P02810 166 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 SRP19P09132 144 aaKnown RBP1.85□□□□□ -2.11
HPS3-203ENST00000460822 ASAH2BP0C7U1 165 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 GABRA3P34903 492 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 ZNF117Q03924 483 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 RPL18Q07020 188 aaKnown RBP1.85□□□□□ -2.11
HPS3-203ENST00000460822 IAH1Q2TAA2 248 aaPredicted RBP1.85□□□□□ -2.11
HPS3-203ENST00000460822 SP6Q3SY56 376 aa1.85□□□□□ -2.11
HPS3-203ENST00000460822 EBLN2Q6P2I7 272 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms