RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 C7orf50Q9BRJ6 194 aaKnown RBP16.27■□□□□ 0.2
PTPN4-207ENST00000460162 SCRT1Q9BWW7 348 aa16.27■□□□□ 0.2
PTPN4-207ENST00000460162 PSENENQ9NZ42 101 aa16.27■□□□□ 0.2
PTPN4-207ENST00000460162 SSSCA1O60232 199 aa16.26■□□□□ 0.19
PTPN4-207ENST00000460162 FAM222AQ5U5X8 452 aa16.26■□□□□ 0.19
PTPN4-207ENST00000460162 AMTNQ6UX39 209 aa16.26■□□□□ 0.19
PTPN4-207ENST00000460162 FAM210BQ96KR6 192 aa16.26■□□□□ 0.19
PTPN4-207ENST00000460162 LOC102723971A0A1B0GUV8 181 aa16.25■□□□□ 0.19
PTPN4-207ENST00000460162 PMS2P5A8MQ11 134 aa16.25■□□□□ 0.19
PTPN4-207ENST00000460162 IL5P05113 134 aa16.25■□□□□ 0.19
PTPN4-207ENST00000460162 RAP2BP61225 183 aa16.25■□□□□ 0.19
PTPN4-207ENST00000460162 SELENOTP62341 195 aa16.25■□□□□ 0.19
PTPN4-207ENST00000460162 POM121L12Q8N7R1 296 aa16.25■□□□□ 0.19
PTPN4-207ENST00000460162 SMIM8Q96KF7 97 aa16.25■□□□□ 0.19
PTPN4-207ENST00000460162 IGF2BP2-AS1Q96M15 143 aa16.25■□□□□ 0.19
PTPN4-207ENST00000460162 NIPSNAP3BQ9BS92 247 aa16.25■□□□□ 0.19
PTPN4-207ENST00000460162 SHANK2-AS3Q9BTD1 123 aa16.25■□□□□ 0.19
PTPN4-207ENST00000460162 SLC25A39Q9BZJ4 359 aaPredicted RBP16.25■□□□□ 0.19
PTPN4-207ENST00000460162 FLVCR2Q9UPI3 526 aa16.25■□□□□ 0.19
PTPN4-207ENST00000460162 HIGD1AQ9Y241 93 aa16.25■□□□□ 0.19
PTPN4-207ENST00000460162 HERC2O95714 4834 aa16.25■□□□□ 0.19
PTPN4-207ENST00000460162 DUSP14O95147 198 aaKnown RBP16.24■□□□□ 0.19
PTPN4-207ENST00000460162 RPL7P18124 248 aaKnown RBP16.24■□□□□ 0.19
PTPN4-207ENST00000460162 PLP1P60201 277 aa16.24■□□□□ 0.19
PTPN4-207ENST00000460162 DLK1P80370 383 aa16.24■□□□□ 0.19
PTPN4-207ENST00000460162 OXA1LQ15070 435 aa16.24■□□□□ 0.19
PTPN4-207ENST00000460162 RRN3P1Q2M238 152 aa16.24■□□□□ 0.19
PTPN4-207ENST00000460162 YTHDF2Q9Y5A9 579 aaKnown RBP16.24■□□□□ 0.19
PTPN4-207ENST00000460162 TRAV8-2A0A0B4J237 113 aa16.23■□□□□ 0.19
PTPN4-207ENST00000460162 CENPXA8MT69 81 aa16.23■□□□□ 0.19
PTPN4-207ENST00000460162 FNDC10F2Z333 226 aa16.23■□□□□ 0.19
PTPN4-207ENST00000460162 LINC00869P0C866 280 aa16.23■□□□□ 0.19
PTPN4-207ENST00000460162 BTCP35070 178 aa16.23■□□□□ 0.19
PTPN4-207ENST00000460162 CNN1P51911 297 aaKnown RBP16.23■□□□□ 0.19
PTPN4-207ENST00000460162 C4orf46Q504U0 113 aa16.23■□□□□ 0.19
PTPN4-207ENST00000460162 TMEM14EPQ6UXP3 125 aa16.23■□□□□ 0.19
PTPN4-207ENST00000460162 LINC00336Q6ZUF6 198 aa16.23■□□□□ 0.19
PTPN4-207ENST00000460162 S100A7AQ86SG5 101 aa16.23■□□□□ 0.19
PTPN4-207ENST00000460162 K7EPK0 472 aa16.22■□□□□ 0.19
PTPN4-207ENST00000460162 HYPMO75409 117 aa16.22■□□□□ 0.19
PTPN4-207ENST00000460162 ANXA7P20073 488 aaKnown RBP16.22■□□□□ 0.19
PTPN4-207ENST00000460162 OR11H7Q8NGC8 314 aa16.22■□□□□ 0.19
PTPN4-207ENST00000460162 SDHCQ99643 169 aaPredicted RBP16.22■□□□□ 0.19
PTPN4-207ENST00000460162 TMEM208Q9BTX3 173 aa16.22■□□□□ 0.19
PTPN4-207ENST00000460162 TSC22D2O75157 780 aa16.21■□□□□ 0.19
PTPN4-207ENST00000460162 SCGB1D2O95969 90 aa16.21■□□□□ 0.19
PTPN4-207ENST00000460162 INSP01308 110 aa16.21■□□□□ 0.19
PTPN4-207ENST00000460162 TAS2R30P59541 319 aa16.21■□□□□ 0.19
PTPN4-207ENST00000460162 FGL1Q08830 312 aa16.21■□□□□ 0.19
PTPN4-207ENST00000460162 IAH1Q2TAA2 248 aaPredicted RBP16.21■□□□□ 0.19
PTPN4-207ENST00000460162 NPVFQ9HCQ7 196 aa16.21■□□□□ 0.19
PTPN4-207ENST00000460162 MGAT4CQ9UBM8 478 aa16.21■□□□□ 0.19
PTPN4-207ENST00000460162 A0A087X0K7 114 aa16.2■□□□□ 0.18
PTPN4-207ENST00000460162 LINC00854A0A1B0GVQ3 168 aa16.2■□□□□ 0.18
PTPN4-207ENST00000460162 CCNKO75909 580 aa16.2■□□□□ 0.18
PTPN4-207ENST00000460162 OR5G3P0C626 314 aa16.2■□□□□ 0.18
PTPN4-207ENST00000460162 METTL15P1P0C7V9 234 aa16.2■□□□□ 0.18
PTPN4-207ENST00000460162 RRAS2P62070 204 aaPredicted RBP16.2■□□□□ 0.18
PTPN4-207ENST00000460162 CNPY1Q3B7I2 92 aa16.2■□□□□ 0.18
PTPN4-207ENST00000460162 RNF182Q8N6D2 247 aa16.2■□□□□ 0.18
PTPN4-207ENST00000460162 OR10P1Q8NGE3 313 aa16.2■□□□□ 0.18
PTPN4-207ENST00000460162 RNF24Q9Y225 148 aa16.2■□□□□ 0.18
PTPN4-207ENST00000460162 IL7P13232 177 aa16.19■□□□□ 0.18
PTPN4-207ENST00000460162 SPINK13Q1W4C9 94 aa16.19■□□□□ 0.18
PTPN4-207ENST00000460162 IGFL4Q6B9Z1 124 aa16.19■□□□□ 0.18
PTPN4-207ENST00000460162 TEPPQ6URK8 271 aa16.19■□□□□ 0.18
PTPN4-207ENST00000460162 ZBTB8BQ8NAP8 495 aaPredicted RBP16.19■□□□□ 0.18
PTPN4-207ENST00000460162 ZNF738Q8NE65 137 aa16.19■□□□□ 0.18
PTPN4-207ENST00000460162 MITD1Q8WV92 249 aa16.19■□□□□ 0.18
PTPN4-207ENST00000460162 UHRF2Q96PU4 802 aa16.19■□□□□ 0.18
PTPN4-207ENST00000460162 RCL1Q9Y2P8 373 aaKnown RBP16.19■□□□□ 0.18
PTPN4-207ENST00000460162 M0R2Z0 102 aa16.18■□□□□ 0.18
PTPN4-207ENST00000460162 CRXO43186 299 aaPredicted RBP16.18■□□□□ 0.18
PTPN4-207ENST00000460162 B2MP61769 119 aa16.18■□□□□ 0.18
PTPN4-207ENST00000460162 PXDC1Q5TGL8 231 aa16.18■□□□□ 0.18
PTPN4-207ENST00000460162 BOLA2-SMG1P6H3BVE0 249 aa16.17■□□□□ 0.18
PTPN4-207ENST00000460162 CXCL3P19876 107 aa16.17■□□□□ 0.18
PTPN4-207ENST00000460162 DAD1P61803 113 aa16.17■□□□□ 0.18
PTPN4-207ENST00000460162 SLC38A11Q08AI6 406 aa16.17■□□□□ 0.18
PTPN4-207ENST00000460162 ZNF546Q86UE3 836 aa16.17■□□□□ 0.18
PTPN4-207ENST00000460162 UBE2DNLQ8IWF7 75 aa16.17■□□□□ 0.18
PTPN4-207ENST00000460162 ARL6Q9H0F7 186 aa16.17■□□□□ 0.18
PTPN4-207ENST00000460162 FAT2Q9NYQ8 4349 aa16.16■□□□□ 0.18
PTPN4-207ENST00000460162 HTN3P15516 51 aa16.16■□□□□ 0.18
PTPN4-207ENST00000460162 TSPOP30536 169 aa16.16■□□□□ 0.18
PTPN4-207ENST00000460162 GGACTQ9BVM4 153 aa16.16■□□□□ 0.18
PTPN4-207ENST00000460162 C20orf85Q9H1P6 137 aa16.16■□□□□ 0.18
PTPN4-207ENST00000460162 ARV1Q9H2C2 271 aa16.16■□□□□ 0.18
PTPN4-207ENST00000460162 PLA2G2EQ9NZK7 142 aa16.16■□□□□ 0.18
PTPN4-207ENST00000460162 CXCL2P19875 107 aa16.15■□□□□ 0.18
PTPN4-207ENST00000460162 BAP18Q8IXM2 172 aa16.15■□□□□ 0.18
PTPN4-207ENST00000460162 OR8A1Q8NGG7 326 aa16.15■□□□□ 0.18
PTPN4-207ENST00000460162 GSKIPQ9P0R6 139 aa16.15■□□□□ 0.18
PTPN4-207ENST00000460162 DNAH2Q9P225 4427 aa16.14■□□□□ 0.17
PTPN4-207ENST00000460162 LYRM9A8MSI8 78 aa16.14■□□□□ 0.17
PTPN4-207ENST00000460162 HIST1H1AQ02539 215 aaPredicted RBP16.14■□□□□ 0.17
PTPN4-207ENST00000460162 LGALS9BQ3B8N2 356 aa16.14■□□□□ 0.17
PTPN4-207ENST00000460162 PATE2Q6UY27 113 aa16.14■□□□□ 0.17
PTPN4-207ENST00000460162 C7orf66A4D0T2 115 aa16.13■□□□□ 0.17
PTPN4-207ENST00000460162 GOSR2O14653 212 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms