RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 SPATA12Q7Z6I5 190 aa4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 C11orf42Q8N5U0 333 aa4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 TMEM75Q8N9X5 138 aa4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 DPF1Q92782 380 aa4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 LINC00479Q96M42 142 aa4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 ZNF48Q96MX3 618 aaPredicted RBP4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 PMCHL2Q9BQD1 86 aa4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 SSBP3Q9BWW4 388 aaPredicted RBP4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 TMEM191AQ9H0A3 160 aa4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 Q9H3A6 140 aa4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 MRPL36Q9P0J6 103 aaKnown RBP4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 RALYQ9UKM9 306 aaKnown RBP4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 HIGD1AQ9Y241 93 aa4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 SIGLEC9Q9Y336 463 aa4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 TENM4Q6N022 2769 aa4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 FLNBO75369 2602 aaKnown RBP4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 TRAV30A0A087WSZ9 112 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 LOC102724200A0A096LPH7 203 aaPredicted RBP4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 TRAV34A0A0B4J273 112 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 A0A0G2JNJ9 132 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 VWC2LB2RUY7 222 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 B9A039 149 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 TEX22C9J3V5 150 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 I3L2K1 104 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 K7EQM0 130 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 THBDP07204 575 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 IGLC1P0CG04 106 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 G0S2P27469 103 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 APOBEC3AP31941 199 aaPredicted RBP4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 RIGQ13278 110 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 PDE6HQ13956 83 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 LYPD2Q6UXB3 125 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 ZNF841Q6ZN19 808 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 C22orf34Q6ZV56 151 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 COX8CQ7Z4L0 72 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 Q86TA4 180 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 PPP1R27Q86WC6 154 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 MUC15Q8N387 334 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 FAM19A2Q8N3H0 131 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 RPRMLQ8N4K4 120 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 OR1B1Q8NGR6 318 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 H1FXQ92522 213 aaKnown RBP4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 URB1-AS1Q96HZ7 61 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 PSMG3-AS1Q96PY0 264 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 NPFFR1Q9GZQ6 430 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 ZNRD1Q9P1U0 126 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 CTSZQ9UBR2 303 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 Q9UFV3 132 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 HSPB8Q9UJY1 196 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 RELNP78509 3460 aa4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 ASH1LQ9NR48 2969 aaKnown RBP4.88□□□□□ -1.63
UBQLN4-202ENST00000459954 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 IGHV1-3A0A0C4DH29 117 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 LY6LH3BQJ8 138 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 BUB1B-PAK6H3BSN5 160 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 SYS1-DBNDD2H3BUS1 97 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 LEPROTL1O95214 131 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 CA1P00915 261 aaPredicted RBP4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 IGLV2-11P01706 119 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 APOHP02749 345 aaPredicted RBP4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 IGLL1P15814 213 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 ORM2P19652 201 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 S100A7P31151 101 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 BSPH1Q075Z2 132 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 PSMG4Q5JS54 123 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 C10orf55Q5SWW7 151 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 FAM120AOSQ5T036 256 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 RNASEKQ6P5S7 137 aaKnown RBP4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 CLEC2AQ6UVW9 174 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 ZNF493Q6ZR52 646 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 BPIFA4PQ86YQ2 179 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 WFDC8Q8IUA0 241 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 STPG4Q8N801 248 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 ZNF738Q8NE65 137 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 OR4F17Q8NGA8 305 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 GTSF1Q8WW33 167 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 ITLN2Q8WWU7 325 aaPredicted RBP4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 KRTAP3-3Q9BYR6 98 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 KRTAP3-2Q9BYR7 98 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 SLC25A39Q9BZJ4 359 aaPredicted RBP4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 WNT10AQ9GZT5 417 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 RAB1BQ9H0U4 201 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 INSIG2Q9Y5U4 225 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 COX11Q9Y6N1 276 aa4.87□□□□□ -1.63
UBQLN4-202ENST00000459954 PCNX1Q96RV3 2341 aa4.86□□□□□ -1.63
UBQLN4-202ENST00000459954 TRBV19A0A075B6N1 114 aa4.86□□□□□ -1.63
UBQLN4-202ENST00000459954 IGHV1-24A0A0C4DH33 117 aa4.86□□□□□ -1.63
UBQLN4-202ENST00000459954 A0A1B0GUT8 65 aa4.86□□□□□ -1.63
UBQLN4-202ENST00000459954 WI2-2373I1.2A0A1W2PRP0 233 aa4.86□□□□□ -1.63
UBQLN4-202ENST00000459954 OR4C46A6NHA9 309 aa4.86□□□□□ -1.63
UBQLN4-202ENST00000459954 A6NNC1 897 aa4.86□□□□□ -1.63
UBQLN4-202ENST00000459954 SHISA9B4DS77 424 aa4.86□□□□□ -1.63
UBQLN4-202ENST00000459954 H3BRN7 92 aa4.86□□□□□ -1.63
UBQLN4-202ENST00000459954 K7EP13 123 aa4.86□□□□□ -1.63
UBQLN4-202ENST00000459954 OVOL3O00110 214 aa4.86□□□□□ -1.63
UBQLN4-202ENST00000459954 CHEK1O14757 476 aa4.86□□□□□ -1.63
UBQLN4-202ENST00000459954 SIAH2O43255 324 aa4.86□□□□□ -1.63
UBQLN4-202ENST00000459954 ENSAO43768 121 aaKnown RBP4.86□□□□□ -1.63
UBQLN4-202ENST00000459954 NDUFB8O95169 186 aa4.86□□□□□ -1.63
UBQLN4-202ENST00000459954 NPSP0C0P6 89 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms