RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 NDFIP1Q9BT67 221 aa6.82□□□□□ -1.32
VPS50-208ENST00000458707 YAE1D1Q9NRH1 226 aa6.82□□□□□ -1.32
VPS50-208ENST00000458707 ZNRD1Q9P1U0 126 aa6.82□□□□□ -1.32
VPS50-208ENST00000458707 NPIPB6E9PJ23 425 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 M0R1B8 84 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 TAX1BP3O14907 124 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 MOSP00540 346 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 IGHV1-46P01743 117 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 HLA-DRB1P01911 266 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 SLC25A5P05141 298 aaKnown RBP6.81□□□□□ -1.32
VPS50-208ENST00000458707 OR5AL1P0C617 328 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 TNFAIP6P98066 277 aaPredicted RBP6.81□□□□□ -1.32
VPS50-208ENST00000458707 HES3Q5TGS1 186 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 LINC00322Q6ZN03 302 aaPredicted RBP6.81□□□□□ -1.32
VPS50-208ENST00000458707 SEM1Q6ZVN7 128 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 Q8N3U1 123 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 C5orf17Q8NAS9 161 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 OR4C13Q8NGP0 309 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 RND1Q92730 232 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 FLYWCH2Q96CP2 140 aaKnown RBP6.81□□□□□ -1.32
VPS50-208ENST00000458707 MRPL36Q9P0J6 103 aaKnown RBP6.81□□□□□ -1.32
VPS50-208ENST00000458707 SVILO95425 2214 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 TRAV17A0A0B4J275 112 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 PGPA6NDG6 321 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 SH2D7A6NKC9 451 aaPredicted RBP6.81□□□□□ -1.32
VPS50-208ENST00000458707 CDX4O14627 284 aaPredicted RBP6.81□□□□□ -1.32
VPS50-208ENST00000458707 LEPROTL1O95214 131 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 IGLV2-23P01705 113 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 MEF2CQ06413 473 aaPredicted RBP6.81□□□□□ -1.32
VPS50-208ENST00000458707 MPV17L2Q567V2 206 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 DHRS13Q6UX07 377 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 ZNF562Q6V9R5 426 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 RBPMS2Q6ZRY4 209 aaKnown RBP6.81□□□□□ -1.32
VPS50-208ENST00000458707 RBMXL3Q8N7X1 1067 aaKnown RBP6.81□□□□□ -1.32
VPS50-208ENST00000458707 C8orf31Q8N9H6 132 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 FDCSPQ8NFU4 85 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 TRGV9Q99603 122 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 CITED1Q99966 193 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 TMEM191AQ9H0A3 160 aa6.81□□□□□ -1.32
VPS50-208ENST00000458707 GEMIN7Q9H840 131 aaKnown RBP6.81□□□□□ -1.32
VPS50-208ENST00000458707 LOC102724200A0A096LPH7 203 aaPredicted RBP6.8□□□□□ -1.32
VPS50-208ENST00000458707 CYSRT1A8MQ03 144 aa6.8□□□□□ -1.32
VPS50-208ENST00000458707 TNFRSF13BO14836 293 aaPredicted RBP6.8□□□□□ -1.32
VPS50-208ENST00000458707 P01737 135 aa6.8□□□□□ -1.32
VPS50-208ENST00000458707 GP9P14770 177 aa6.8□□□□□ -1.32
VPS50-208ENST00000458707 PLP1P60201 277 aa6.8□□□□□ -1.32
VPS50-208ENST00000458707 BVES-AS1Q5T3Y7 98 aa6.8□□□□□ -1.32
VPS50-208ENST00000458707 UFSP1Q6NVU6 142 aa6.8□□□□□ -1.32
VPS50-208ENST00000458707 SLC25A34Q6PIV7 304 aa6.8□□□□□ -1.32
VPS50-208ENST00000458707 C12orf54Q6X4T0 127 aa6.8□□□□□ -1.32
VPS50-208ENST00000458707 LINC00173Q6ZV60 143 aa6.8□□□□□ -1.32
VPS50-208ENST00000458707 LINC00311Q8N616 119 aa6.8□□□□□ -1.32
VPS50-208ENST00000458707 DEFB125Q8N687 156 aa6.8□□□□□ -1.32
VPS50-208ENST00000458707 DEFB108BQ8NET1 73 aa6.8□□□□□ -1.32
VPS50-208ENST00000458707 OR10X1Q8NGY0 326 aa6.8□□□□□ -1.32
VPS50-208ENST00000458707 MS4A6AQ9H2W1 248 aa6.8□□□□□ -1.32
VPS50-208ENST00000458707 SCRT2Q9NQ03 307 aa6.8□□□□□ -1.32
VPS50-208ENST00000458707 A0A1W2PPI3 338 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 TMEM189A5PLL7 270 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 OVOL3O00110 214 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 APOHP02749 345 aaPredicted RBP6.79□□□□□ -1.32
VPS50-208ENST00000458707 TCRAP04437 139 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 SP9P0CG40 484 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 ZNF137PP52743 207 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 FOXA3P55318 350 aaPredicted RBP6.79□□□□□ -1.32
VPS50-208ENST00000458707 MRGPRG-AS1Q2M3A8 158 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 ZNF474Q6S9Z5 364 aaPredicted RBP6.79□□□□□ -1.32
VPS50-208ENST00000458707 GATD1Q8NB37 220 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 OR1B1Q8NGR6 318 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 ST6GALNAC6Q969X2 333 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 ZNF835Q9Y2P0 537 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 DMXL1Q9Y485 3027 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 MALRD1Q5VYJ5 2156 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 TRAV25A0A0B4J276 109 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 TRBV6-1A0A0K0K1D8 114 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 hDV102S1A0JD36 115 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 PLAUP00749 431 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 IGHG4P01861 327 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 HOXB4P17483 251 aaPredicted RBP6.79□□□□□ -1.32
VPS50-208ENST00000458707 CCL11P51671 97 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 C10orf55Q5SWW7 151 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 LINC01545Q5VT33 79 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 TMEM116Q8NCL8 245 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 BLNKQ8WV28 456 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 TMEM190Q8WZ59 177 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 H1FXQ92522 213 aaKnown RBP6.79□□□□□ -1.32
VPS50-208ENST00000458707 PGLYRP4Q96LB8 373 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 SPATA25Q9BR10 227 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 MAP1LC3CQ9BXW4 147 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 PSG8Q9UQ74 426 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 WASHC3Q9Y3C0 194 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 NAV2Q8IVL1 2488 aa6.79□□□□□ -1.32
VPS50-208ENST00000458707 K7EQM0 130 aa6.78□□□□□ -1.32
VPS50-208ENST00000458707 NUDT3O95989 172 aa6.78□□□□□ -1.32
VPS50-208ENST00000458707 IGHV3-48P01763 117 aa6.78□□□□□ -1.32
VPS50-208ENST00000458707 ORM2P19652 201 aa6.78□□□□□ -1.32
VPS50-208ENST00000458707 CD300EQ496F6 205 aaPredicted RBP6.78□□□□□ -1.32
VPS50-208ENST00000458707 AMMECR1LQ6DCA0 310 aa6.78□□□□□ -1.32
VPS50-208ENST00000458707 SGK494Q96LW2 274 aa6.78□□□□□ -1.32
VPS50-208ENST00000458707 Q9H3A6 140 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms