RNA–Protein interactions for RNA: ENST00000458642.5

HDAC11-216, Transcript of histone deacetylase 11, humanhuman

TSL 5

Gene HDAC11, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-216ENST00000458642 MAPKAPK5-AS1Q8N8E1 139 aa12.98□□□□□ -0.33
HDAC11-216ENST00000458642 LYRM9A8MSI8 78 aa12.97□□□□□ -0.33
HDAC11-216ENST00000458642 H3BP45 60 aa12.97□□□□□ -0.33
HDAC11-216ENST00000458642 WRBO00258 174 aa12.97□□□□□ -0.33
HDAC11-216ENST00000458642 ANXA3P12429 323 aa12.97□□□□□ -0.33
HDAC11-216ENST00000458642 ALDH3B2P48448 385 aa12.97□□□□□ -0.33
HDAC11-216ENST00000458642 FAM3BP58499 235 aaPredicted RBP12.97□□□□□ -0.33
HDAC11-216ENST00000458642 SAMD13Q5VXD3 122 aa12.97□□□□□ -0.33
HDAC11-216ENST00000458642 C6orf223Q8N319 242 aa12.97□□□□□ -0.33
HDAC11-216ENST00000458642 OR1B1Q8NGR6 318 aa12.97□□□□□ -0.33
HDAC11-216ENST00000458642 SCGB3A2Q96PL1 93 aa12.97□□□□□ -0.33
HDAC11-216ENST00000458642 LINC00588Q9Y4M8 146 aa12.97□□□□□ -0.33
HDAC11-216ENST00000458642 CDK2AP2O75956 126 aa12.96□□□□□ -0.33
HDAC11-216ENST00000458642 SRPXP78539 464 aa12.96□□□□□ -0.33
HDAC11-216ENST00000458642 GGNBP1Q5YKI7 109 aa12.96□□□□□ -0.33
HDAC11-216ENST00000458642 DYNC2LI1Q8TCX1 351 aa12.96□□□□□ -0.33
HDAC11-216ENST00000458642 ACOT7LQ6ZUV0 252 aa12.95□□□□□ -0.34
HDAC11-216ENST00000458642 GPR141Q7Z602 305 aa12.95□□□□□ -0.34
HDAC11-216ENST00000458642 ZNF738Q8NE65 137 aa12.95□□□□□ -0.34
HDAC11-216ENST00000458642 BPIFCQ8NFQ6 507 aa12.95□□□□□ -0.34
HDAC11-216ENST00000458642 OR4D5Q8NGN0 318 aa12.95□□□□□ -0.34
HDAC11-216ENST00000458642 RNF141Q8WVD5 230 aa12.95□□□□□ -0.34
HDAC11-216ENST00000458642 SOSTQ9BQB4 213 aa12.95□□□□□ -0.34
HDAC11-216ENST00000458642 TMEM147Q9BVK8 224 aa12.95□□□□□ -0.34
HDAC11-216ENST00000458642 SLC45A2Q9UMX9 530 aa12.95□□□□□ -0.34
HDAC11-216ENST00000458642 H3BRN7 92 aa12.94□□□□□ -0.34
HDAC11-216ENST00000458642 BOLA2-SMG1P6H3BVE0 249 aa12.94□□□□□ -0.34
HDAC11-216ENST00000458642 DUSP14O95147 198 aaKnown RBP12.94□□□□□ -0.34
HDAC11-216ENST00000458642 HTN1P15515 57 aa12.94□□□□□ -0.34
HDAC11-216ENST00000458642 VAMP1P23763 118 aa12.94□□□□□ -0.34
HDAC11-216ENST00000458642 TSPOP30536 169 aa12.94□□□□□ -0.34
HDAC11-216ENST00000458642 AKR1C1Q04828 323 aa12.94□□□□□ -0.34
HDAC11-216ENST00000458642 SPANXN5Q5MJ07 72 aa12.94□□□□□ -0.34
HDAC11-216ENST00000458642 KRTAP1-5Q9BYS1 174 aa12.94□□□□□ -0.34
HDAC11-216ENST00000458642 CCDC59Q9P031 241 aaKnown RBP12.94□□□□□ -0.34
HDAC11-216ENST00000458642 HERC1Q15751 4861 aa12.94□□□□□ -0.34
HDAC11-216ENST00000458642 DUXBA0A1W2PPF3 345 aa12.93□□□□□ -0.34
HDAC11-216ENST00000458642 SYNGR2O43760 224 aa12.93□□□□□ -0.34
HDAC11-216ENST00000458642 CFDP00746 253 aaPredicted RBP12.93□□□□□ -0.34
HDAC11-216ENST00000458642 HIST1H1AQ02539 215 aaPredicted RBP12.93□□□□□ -0.34
HDAC11-216ENST00000458642 UHRF2Q96PU4 802 aa12.93□□□□□ -0.34
HDAC11-216ENST00000458642 LINC01587Q99440 93 aa12.93□□□□□ -0.34
HDAC11-216ENST00000458642 RSL24D1Q9UHA3 163 aaKnown RBP12.93□□□□□ -0.34
HDAC11-216ENST00000458642 ATP5G1P05496 136 aa12.92□□□□□ -0.34
HDAC11-216ENST00000458642 HOXB5P09067 269 aa12.92□□□□□ -0.34
HDAC11-216ENST00000458642 TNFSF8P32971 234 aa12.92□□□□□ -0.34
HDAC11-216ENST00000458642 ATP5G3P48201 142 aa12.92□□□□□ -0.34
HDAC11-216ENST00000458642 KIR3DS1Q14943 382 aa12.92□□□□□ -0.34
HDAC11-216ENST00000458642 TMEM128Q5BJH2 165 aa12.92□□□□□ -0.34
HDAC11-216ENST00000458642 LRTM2Q8N967 370 aa12.92□□□□□ -0.34
HDAC11-216ENST00000458642 GPR82Q96P67 336 aa12.92□□□□□ -0.34
HDAC11-216ENST00000458642 SHANK2-AS3Q9BTD1 123 aa12.92□□□□□ -0.34
HDAC11-216ENST00000458642 MRPS26Q9BYN8 205 aaKnown RBP12.92□□□□□ -0.34
HDAC11-216ENST00000458642 SLIRPQ9GZT3 109 aaKnown RBP12.92□□□□□ -0.34
HDAC11-216ENST00000458642 CBY3A6NI87 242 aa12.91□□□□□ -0.34
HDAC11-216ENST00000458642 SLC25A6P12236 298 aa12.91□□□□□ -0.34
HDAC11-216ENST00000458642 CXCL3P19876 107 aa12.91□□□□□ -0.34
HDAC11-216ENST00000458642 CCL18P55774 89 aa12.91□□□□□ -0.34
HDAC11-216ENST00000458642 RHOBP62745 196 aa12.91□□□□□ -0.34
HDAC11-216ENST00000458642 PPP1R1AQ13522 171 aa12.91□□□□□ -0.34
HDAC11-216ENST00000458642 CYP2G1PQ6ZSU1 146 aa12.91□□□□□ -0.34
HDAC11-216ENST00000458642 SSX7Q7RTT5 188 aa12.91□□□□□ -0.34
HDAC11-216ENST00000458642 OR8A1Q8NGG7 326 aa12.91□□□□□ -0.34
HDAC11-216ENST00000458642 TRIM63Q969Q1 353 aa12.91□□□□□ -0.34
HDAC11-216ENST00000458642 RABL2AQ9UBK7 228 aaPredicted RBP12.91□□□□□ -0.34
HDAC11-216ENST00000458642 RABL2BQ9UNT1 228 aa12.91□□□□□ -0.34
HDAC11-216ENST00000458642 SMCO3A2RU48 225 aa12.9□□□□□ -0.34
HDAC11-216ENST00000458642 FABP12A6NFH5 140 aa12.9□□□□□ -0.34
HDAC11-216ENST00000458642 MED6O75586 246 aa12.9□□□□□ -0.34
HDAC11-216ENST00000458642 CCNKO75909 580 aa12.9□□□□□ -0.34
HDAC11-216ENST00000458642 SNRPCP09234 159 aaKnown RBP12.9□□□□□ -0.34
HDAC11-216ENST00000458642 SPATA12Q7Z6I5 190 aa12.9□□□□□ -0.34
HDAC11-216ENST00000458642 CIB3Q96Q77 187 aaPredicted RBP12.9□□□□□ -0.34
HDAC11-216ENST00000458642 PARD6GQ9BYG4 376 aaPredicted RBP12.9□□□□□ -0.34
HDAC11-216ENST00000458642 NOP10Q9NPE3 64 aaKnown RBP12.9□□□□□ -0.34
HDAC11-216ENST00000458642 SFT2D2O95562 160 aa12.89□□□□□ -0.35
HDAC11-216ENST00000458642 IL5P05113 134 aa12.89□□□□□ -0.35
HDAC11-216ENST00000458642 TAS2R60P59551 318 aa12.89□□□□□ -0.35
HDAC11-216ENST00000458642 KRTAP10-2P60368 255 aa12.89□□□□□ -0.35
HDAC11-216ENST00000458642 B2MP61769 119 aa12.89□□□□□ -0.35
HDAC11-216ENST00000458642 TMEM144Q7Z5S9 345 aa12.89□□□□□ -0.35
HDAC11-216ENST00000458642 HIGD1AQ9Y241 93 aa12.89□□□□□ -0.35
HDAC11-216ENST00000458642 ADAP1O75689 374 aa12.88□□□□□ -0.35
HDAC11-216ENST00000458642 OR5G3P0C626 314 aa12.88□□□□□ -0.35
HDAC11-216ENST00000458642 LINC00869P0C866 280 aa12.88□□□□□ -0.35
HDAC11-216ENST00000458642 POLR2GP62487 172 aaKnown RBP eCLIP12.88□□□□□ -0.35
HDAC11-216ENST00000458642 RPP30P78346 268 aaKnown RBP12.88□□□□□ -0.35
HDAC11-216ENST00000458642 PSG3Q16557 428 aa12.88□□□□□ -0.35
HDAC11-216ENST00000458642 Q8N1X5 172 aa12.88□□□□□ -0.35
HDAC11-216ENST00000458642 RNASE8Q8TDE3 154 aaKnown RBP12.88□□□□□ -0.35
HDAC11-216ENST00000458642 RAB2BQ8WUD1 216 aa12.88□□□□□ -0.35
HDAC11-216ENST00000458642 Q9H8V8 135 aa12.88□□□□□ -0.35
HDAC11-216ENST00000458642 STRAPQ9Y3F4 350 aaKnown RBP12.88□□□□□ -0.35
HDAC11-216ENST00000458642 TIMM8BQ9Y5J9 83 aaPredicted RBP12.88□□□□□ -0.35
HDAC11-216ENST00000458642 PMS2P5A8MQ11 134 aa12.87□□□□□ -0.35
HDAC11-216ENST00000458642 HYPMO75409 117 aa12.87□□□□□ -0.35
HDAC11-216ENST00000458642 RPL7P18124 248 aaKnown RBP12.87□□□□□ -0.35
HDAC11-216ENST00000458642 RAP2BP61225 183 aa12.87□□□□□ -0.35
HDAC11-216ENST00000458642 RRAS2P62070 204 aaPredicted RBP12.87□□□□□ -0.35
HDAC11-216ENST00000458642 CLINT1Q14677 625 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms