RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 LCN12Q6JVE5 192 aa12.66□□□□□ -0.38
TRIM39-211ENST00000458516 SIGLEC15Q6ZMC9 328 aa12.66□□□□□ -0.38
TRIM39-211ENST00000458516 OR8I2Q8N0Y5 310 aa12.66□□□□□ -0.38
TRIM39-211ENST00000458516 MRPL32Q9BYC8 188 aaKnown RBP12.66□□□□□ -0.38
TRIM39-211ENST00000458516 DNAH3Q8TD57 4116 aa12.66□□□□□ -0.38
TRIM39-211ENST00000458516 TRAV5A0A0B4J249 113 aa12.65□□□□□ -0.38
TRIM39-211ENST00000458516 ZNF785A8K8V0 405 aa12.65□□□□□ -0.38
TRIM39-211ENST00000458516 TSPAN4O14817 238 aa12.65□□□□□ -0.38
TRIM39-211ENST00000458516 MRPS12O15235 138 aaKnown RBP12.65□□□□□ -0.38
TRIM39-211ENST00000458516 CD5P06127 495 aa12.65□□□□□ -0.38
TRIM39-211ENST00000458516 SEC11BP0C7V7 166 aa12.65□□□□□ -0.38
TRIM39-211ENST00000458516 RBPMS2Q6ZRY4 209 aaKnown RBP12.65□□□□□ -0.38
TRIM39-211ENST00000458516 MIR17HGQ75NE6 70 aa12.65□□□□□ -0.38
TRIM39-211ENST00000458516 OR10G4Q8NGN3 311 aa12.65□□□□□ -0.38
TRIM39-211ENST00000458516 OR10G9Q8NGN4 311 aa12.65□□□□□ -0.38
TRIM39-211ENST00000458516 OR10G7Q8NGN6 311 aa12.65□□□□□ -0.38
TRIM39-211ENST00000458516 PLA2G2EQ9NZK7 142 aa12.65□□□□□ -0.38
TRIM39-211ENST00000458516 FUT9Q9Y231 359 aa12.65□□□□□ -0.38
TRIM39-211ENST00000458516 MGAM2Q2M2H8 2515 aa12.65□□□□□ -0.38
TRIM39-211ENST00000458516 IGKV3-7A0A075B6H7 116 aa12.64□□□□□ -0.39
TRIM39-211ENST00000458516 HELTA6NFD8 242 aa12.64□□□□□ -0.39
TRIM39-211ENST00000458516 MBP02144 154 aa12.64□□□□□ -0.39
TRIM39-211ENST00000458516 KRTAP10-11P60412 298 aa12.64□□□□□ -0.39
TRIM39-211ENST00000458516 RHOBP62745 196 aa12.64□□□□□ -0.39
TRIM39-211ENST00000458516 BEAN1Q3B7T3 259 aa12.64□□□□□ -0.39
TRIM39-211ENST00000458516 TMEM41BQ5BJD5 291 aa12.64□□□□□ -0.39
TRIM39-211ENST00000458516 KPRPQ5T749 579 aaPredicted RBP12.64□□□□□ -0.39
TRIM39-211ENST00000458516 FAM122CQ6P4D5 195 aa12.64□□□□□ -0.39
TRIM39-211ENST00000458516 GPR82Q96P67 336 aa12.64□□□□□ -0.39
TRIM39-211ENST00000458516 SPAG8Q99932 426 aaPredicted RBP12.64□□□□□ -0.39
TRIM39-211ENST00000458516 SLC25A2Q9BXI2 301 aa12.64□□□□□ -0.39
TRIM39-211ENST00000458516 RNF24Q9Y225 148 aa12.64□□□□□ -0.39
TRIM39-211ENST00000458516 SMAD5-AS1Q9Y6J3 95 aa12.64□□□□□ -0.39
TRIM39-211ENST00000458516 RPL7P18124 248 aaKnown RBP12.63□□□□□ -0.39
TRIM39-211ENST00000458516 AKR1C8PQ5T2L2 129 aa12.63□□□□□ -0.39
TRIM39-211ENST00000458516 RPP25LQ8N5L8 163 aaKnown RBP12.63□□□□□ -0.39
TRIM39-211ENST00000458516 TMED6Q8WW62 240 aa12.63□□□□□ -0.39
TRIM39-211ENST00000458516 FAM167A-AS1Q96KT0 104 aa12.63□□□□□ -0.39
TRIM39-211ENST00000458516 C17orf77Q96MU5 243 aa12.63□□□□□ -0.39
TRIM39-211ENST00000458516 RPRMQ9NS64 109 aa12.63□□□□□ -0.39
TRIM39-211ENST00000458516 EIF3GO75821 320 aaKnown RBP eCLIP12.62□□□□□ -0.39
TRIM39-211ENST00000458516 GP9P14770 177 aa12.62□□□□□ -0.39
TRIM39-211ENST00000458516 GALR1P47211 349 aa12.62□□□□□ -0.39
TRIM39-211ENST00000458516 CDC34P49427 236 aaPredicted RBP12.62□□□□□ -0.39
TRIM39-211ENST00000458516 RPL11P62913 178 aaKnown RBP12.62□□□□□ -0.39
TRIM39-211ENST00000458516 GUCA2BQ16661 112 aa12.62□□□□□ -0.39
TRIM39-211ENST00000458516 GBGT1Q8N5D6 347 aa12.62□□□□□ -0.39
TRIM39-211ENST00000458516 STXBP6Q8NFX7 210 aa12.62□□□□□ -0.39
TRIM39-211ENST00000458516 MS4A6AQ9H2W1 248 aa12.62□□□□□ -0.39
TRIM39-211ENST00000458516 ZNF256Q9Y2P7 627 aaPredicted RBP12.62□□□□□ -0.39
TRIM39-211ENST00000458516 A0A1W2PPV4 95 aa12.61□□□□□ -0.39
TRIM39-211ENST00000458516 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.61□□□□□ -0.39
TRIM39-211ENST00000458516 SSX7Q7RTT5 188 aa12.61□□□□□ -0.39
TRIM39-211ENST00000458516 BPIFA4PQ86YQ2 179 aa12.61□□□□□ -0.39
TRIM39-211ENST00000458516 DCANP1Q8TF63 244 aa12.61□□□□□ -0.39
TRIM39-211ENST00000458516 NRN1Q9NPD7 142 aa12.61□□□□□ -0.39
TRIM39-211ENST00000458516 TMEM14CQ9P0S9 112 aa12.61□□□□□ -0.39
TRIM39-211ENST00000458516 A0A087X0K7 114 aa12.6□□□□□ -0.39
TRIM39-211ENST00000458516 TRAV2A0A0B4J234 112 aa12.6□□□□□ -0.39
TRIM39-211ENST00000458516 K7EQG2 157 aa12.6□□□□□ -0.39
TRIM39-211ENST00000458516 PYYP10082 97 aa12.6□□□□□ -0.39
TRIM39-211ENST00000458516 ATF4P18848 351 aaPredicted RBP12.6□□□□□ -0.39
TRIM39-211ENST00000458516 TFPI2P48307 235 aa12.6□□□□□ -0.39
TRIM39-211ENST00000458516 ZNF726P1Q15940 193 aa12.6□□□□□ -0.39
TRIM39-211ENST00000458516 KHDC3LQ587J8 217 aa12.6□□□□□ -0.39
TRIM39-211ENST00000458516 WFDC3Q8IUB2 231 aa12.6□□□□□ -0.39
TRIM39-211ENST00000458516 RAB24Q969Q5 203 aa12.6□□□□□ -0.39
TRIM39-211ENST00000458516 ZNF503Q96F45 646 aa12.6□□□□□ -0.39
TRIM39-211ENST00000458516 OR4C46A6NHA9 309 aa12.59□□□□□ -0.39
TRIM39-211ENST00000458516 UMAD1C9J7I0 102 aa12.59□□□□□ -0.39
TRIM39-211ENST00000458516 DNASE2O00115 360 aaPredicted RBP12.59□□□□□ -0.39
TRIM39-211ENST00000458516 SOCS3O14543 225 aa12.59□□□□□ -0.39
TRIM39-211ENST00000458516 IGLC2P0DOY2 106 aa12.59□□□□□ -0.39
TRIM39-211ENST00000458516 TAS2R45P59539 299 aa12.59□□□□□ -0.39
TRIM39-211ENST00000458516 PAFAH1B2P68402 229 aa12.59□□□□□ -0.39
TRIM39-211ENST00000458516 EIF5AL1Q6IS14 154 aaKnown RBP12.59□□□□□ -0.39
TRIM39-211ENST00000458516 FAM24BQ8N5W8 94 aa12.59□□□□□ -0.39
TRIM39-211ENST00000458516 PRR25Q96S07 402 aa12.59□□□□□ -0.39
TRIM39-211ENST00000458516 ACTR3CQ9C0K3 210 aaPredicted RBP12.59□□□□□ -0.39
TRIM39-211ENST00000458516 ZMAT5Q9UDW3 170 aaKnown RBP12.59□□□□□ -0.39
TRIM39-211ENST00000458516 CTXND1A0A1B0GTU2 59 aa12.58□□□□□ -0.4
TRIM39-211ENST00000458516 H3BQ15 152 aa12.58□□□□□ -0.4
TRIM39-211ENST00000458516 HMGB3O15347 200 aaKnown RBP12.58□□□□□ -0.4
TRIM39-211ENST00000458516 OR7C2O60412 319 aa12.58□□□□□ -0.4
TRIM39-211ENST00000458516 STAG3L2P0CL84 134 aa12.58□□□□□ -0.4
TRIM39-211ENST00000458516 STAG3L3P0CL85 134 aa12.58□□□□□ -0.4
TRIM39-211ENST00000458516 FHITP49789 147 aa12.58□□□□□ -0.4
TRIM39-211ENST00000458516 PAXXQ9BUH6 204 aa12.58□□□□□ -0.4
TRIM39-211ENST00000458516 OR51M1Q9H341 326 aa12.58□□□□□ -0.4
TRIM39-211ENST00000458516 ZNF586Q9NXT0 402 aa12.58□□□□□ -0.4
TRIM39-211ENST00000458516 SNRPCP09234 159 aaKnown RBP12.57□□□□□ -0.4
TRIM39-211ENST00000458516 CD7P09564 240 aa12.57□□□□□ -0.4
TRIM39-211ENST00000458516 HIST1H1EP10412 219 aaKnown RBP12.57□□□□□ -0.4
TRIM39-211ENST00000458516 MEOX2P50222 304 aa12.57□□□□□ -0.4
TRIM39-211ENST00000458516 SULT1A2P50226 295 aa12.57□□□□□ -0.4
TRIM39-211ENST00000458516 FXYD5Q96DB9 178 aa12.57□□□□□ -0.4
TRIM39-211ENST00000458516 PHYHIPLQ96FC7 376 aa12.57□□□□□ -0.4
TRIM39-211ENST00000458516 HRH4Q9H3N8 390 aa12.57□□□□□ -0.4
TRIM39-211ENST00000458516 H3BTX0 84 aa12.56□□□□□ -0.4
TRIM39-211ENST00000458516 OR10J4P0C629 311 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms