RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 SIGLEC12Q96PQ1 595 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 K7EP13 123 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 EGR2P11161 476 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-204ENST00000455883 TDGF1P3P51864 188 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 C14orf144Q96I85 54 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 SCTP09683 121 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 CFHR1Q03591 330 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 FXYD3Q14802 87 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 SP7Q8TDD2 431 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-204ENST00000455883 C11orf52Q96A22 123 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 TTTY12Q9BZ98 90 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-204ENST00000455883 H3BT86 120 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 CCL7P80098 99 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 SPAG8Q99932 426 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-204ENST00000455883 DEFB127Q9H1M4 99 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 KMT2BQ9UMN6 2715 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-204ENST00000455883 LTBP2Q14767 1821 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 IGHV2OR16-5A0A0B4J2B6 119 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 GAGE12HA6NDE8 117 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 LYPD6BQ8NI32 183 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 WNT10AQ9GZT5 417 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 IGHV2-70DA0A0C4DH43 119 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 CXCL5P42830 114 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 CRYBA4P53673 196 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 TRIP6Q15654 476 aaKnown RBP4.33□□□□□ -1.72
CSMD3-204ENST00000455883 TPTE2P1Q5T6R2 138 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 GAGE2AQ6NT46 116 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 LOC105371242A0A075B767 164 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 SRRM5B3KS81 715 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 FUSP35637 526 aaKnown RBP eCLIP4.33□□□□□ -1.72
CSMD3-204ENST00000455883 TRPT1Q86TN4 253 aaKnown RBP4.33□□□□□ -1.72
CSMD3-204ENST00000455883 DSCR8Q96T75 97 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 CCL25O15444 150 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 GUSBP1Q15486 140 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 SMRP1Q8NCR6 262 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 TIAF1O95411 115 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 RPS27P42677 84 aaKnown RBP4.33□□□□□ -1.72
CSMD3-204ENST00000455883 TEN1Q86WV5 123 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 IGKV3D-11A0A0A0MRZ8 115 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 IGHV1OR15-9A0A0B4J2B8 117 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 PRSS46E5RG02 174 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 IGHV2-5P01817 119 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 NPSP0C0P6 89 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 DUX3Q96PT4 197 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 IGHV5-10-1A0A0J9YXX1 117 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 PRKNO60260 465 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-204ENST00000455883 PTGER1P34995 402 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 HERVK_113P63121 156 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 SMAD2Q15796 467 aaKnown RBP4.32□□□□□ -1.72
CSMD3-204ENST00000455883 F11RQ9Y624 299 aaKnown RBP4.32□□□□□ -1.72
CSMD3-204ENST00000455883 FOXS1O43638 330 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 WNT5AP41221 380 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 INSL4Q14641 139 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 ABHD12Q8N2K0 398 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 hADV29S1A0JD25 119 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 TCRAP04437 139 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 TMEM133Q9H2Q1 129 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 UBE2BP63146 152 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 GTSCR1Q86UQ5 136 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 TMEM256Q8N2U0 113 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 TPRX1Q8N7U7 411 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 OR13A1Q8NGR1 328 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 DMBT1Q9UGM3 2413 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-204ENST00000455883 FOXG1P55316 489 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-204ENST00000455883 A0A087WX48 190 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 BTCP35070 178 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 MRPS36P82909 103 aaKnown RBP4.32□□□□□ -1.72
CSMD3-204ENST00000455883 HS3ST6Q96QI5 342 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 MAP1AP78559 2803 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-204ENST00000455883 A0A1W2PPM0 123 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 HAX1O00165 279 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 MP68P56378 58 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 SIGLEC15Q6ZMC9 328 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 NPIPB3Q92617 1050 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 RNF126Q9BV68 326 aa4.32□□□□□ -1.72
CSMD3-204ENST00000455883 E9PQ18 207 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 COX7A1P24310 79 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 ZFP36L1Q07352 338 aaKnown RBP4.31□□□□□ -1.72
CSMD3-204ENST00000455883 VGLL1Q99990 258 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 H0Y8X5 98 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 KLK10O43240 276 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 CD28P10747 220 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 KLF5Q13887 457 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-204ENST00000455883 A4D1N5 150 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 SPEM2Q0P670 501 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 TREML4Q6UXN2 200 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 REG4Q9BYZ8 158 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 C2CD4DB7Z1M9 353 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 SHISA8B8ZZ34 492 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 CT62P0C5K7 136 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 EDN3P14138 238 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 ERCC8Q13216 396 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 CFAP46Q8IYW2 2715 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 SHISA7A6NL88 538 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 C12orf77C9JDV5 145 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 ZNF474Q6S9Z5 364 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-204ENST00000455883 ANAPC10Q9UM13 185 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 PFN1P07737 140 aaKnown RBP4.31□□□□□ -1.72
CSMD3-204ENST00000455883 PSG8Q9UQ74 426 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms