RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 SLC25A5P05141 298 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 CLEC3BP05452 202 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 NPPCP23582 126 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 ADMP35318 185 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 RPL35P42766 123 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 TPPP2P59282 170 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 UBE2G2P60604 165 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 SUMO1P63165 101 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 COX8CQ7Z4L0 72 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 GPHB5Q86YW7 130 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 TMEM75Q8N9X5 138 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 CMTM2Q8TAZ6 248 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 PYGO2Q9BRQ0 406 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 ZFP30Q9Y2G7 519 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 SCO2A0A1W2PP80 73 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 OR2T8A6NH00 312 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 G3V318 75 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 GCGP01275 180 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 IGHV4-59P01825 116 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 CSN1S1P47710 185 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 ADIRFQ15847 76 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 LY6EQ16553 131 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 CT83Q5H943 113 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 TOMM20LQ6UXN7 152 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 UBE2E2Q96LR5 201 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 PPP1R14DQ9NXH3 145 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 ZNF492Q9P255 531 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 CREBBPQ92793 2442 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 FAM231BA6NCW3 169 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 LGALS9O00182 355 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 BUB3O43684 328 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 IGHV3-48P01763 117 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 TYMSP04818 313 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 ATF4P18848 351 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 GPR183P32249 361 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 ARL3P36405 182 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 CEBPGP53567 150 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 FLI1Q01543 452 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 USF2Q15853 346 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 ZNF674Q2M3X9 581 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 FAM106AQ4KMX7 169 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 C9orf152Q5JTZ5 239 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 WFDC11Q8NEX6 87 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 SFRP2Q96HF1 295 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 ZNF414Q96IQ9 312 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 IGF2BP2-AS1Q96M15 143 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 Q9H3A6 140 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 SAV1Q9H4B6 383 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 UFC1Q9Y3C8 167 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 TRAV5A0A0B4J249 113 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 PGPA6NDG6 321 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 SCO1O75880 301 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 TCRAP04437 139 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 UBE2G1P62253 170 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 MORN5Q5VZ52 161 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 RASL11AQ6T310 242 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 CLEC19AQ6UXS0 136 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 C19orf35Q6ZS72 473 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 REC114Q7Z4M0 266 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 OR8I2Q8N0Y5 310 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 BCL6BQ8N143 479 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 OR4B1Q8NGF8 309 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 OR10G8Q8NGN5 311 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 C16orf95Q9H693 158 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 ZNF702PQ9H963 129 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 ZNF586Q9NXT0 402 aa5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 PEF1Q9UBV8 284 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-210ENST00000454859 UTP20O75691 2785 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 IGHV3-21A0A0B4J1V1 117 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 TRBV7-9A0A0J9YWB2 115 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 LINC01548A6NM66 108 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 PFN1P07737 140 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 PYYP10082 97 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 PF4V1P10720 104 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 RAB5AP20339 215 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 RAB5BP61020 215 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 BLCAPP62952 87 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 CENPWQ5EE01 88 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 SAPCD1Q5SSQ6 148 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 C16orf54Q6UWD8 224 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 SIGLEC15Q6ZMC9 328 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 LENEPQ9Y5L5 61 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 ZNF785A8K8V0 405 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 A8MWP6 167 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 C1orf196B1AJZ1 125 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 HOXA3O43365 443 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 LTAP01374 205 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 RNASE1P07998 156 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 LGALS1P09382 135 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 FAM3BP58499 235 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 RANP62826 216 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 SRSF2Q01130 221 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 KRTAP1-1Q07627 177 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 ELOBQ15370 118 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 CBLN2Q8IUK8 224 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 TMEM183AQ8IXX5 376 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 OR4X2Q8NGF9 303 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 OCC1Q8TAD7 63 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 ZNF418Q8TF45 676 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 MLST8Q9BVC4 326 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms