RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 TDGF1P13385 188 aa9.85□□□□□ -0.83
SEC16A-207ENST00000453963 SELLP14151 372 aa9.85□□□□□ -0.83
SEC16A-207ENST00000453963 KIR3DS1Q14943 382 aa9.85□□□□□ -0.83
SEC16A-207ENST00000453963 PLSCR4Q9NRQ2 329 aa9.85□□□□□ -0.83
SEC16A-207ENST00000453963 METRNQ9UJH8 293 aa9.85□□□□□ -0.83
SEC16A-207ENST00000453963 RBMY1BA6NDE4 496 aaKnown RBP9.84□□□□□ -0.83
SEC16A-207ENST00000453963 RBMY1EA6NEQ0 496 aaKnown RBP9.84□□□□□ -0.83
SEC16A-207ENST00000453963 RBMY1DP0C7P1 496 aaKnown RBP9.84□□□□□ -0.83
SEC16A-207ENST00000453963 RBMY1A1P0DJD3 496 aaKnown RBP9.84□□□□□ -0.83
SEC16A-207ENST00000453963 RBMY1CP0DJD4 496 aa9.84□□□□□ -0.83
SEC16A-207ENST00000453963 RLFQ13129 1914 aa9.84□□□□□ -0.83
SEC16A-207ENST00000453963 KLF2Q9Y5W3 355 aaPredicted RBP9.84□□□□□ -0.83
SEC16A-207ENST00000453963 LYNX1G3V0Z9 82 aa9.84□□□□□ -0.83
SEC16A-207ENST00000453963 ITGB1BP1O14713 200 aa9.84□□□□□ -0.83
SEC16A-207ENST00000453963 NCR2O95944 276 aa9.84□□□□□ -0.83
SEC16A-207ENST00000453963 LYNX1P0DP58 116 aa9.84□□□□□ -0.83
SEC16A-207ENST00000453963 RNASE2P10153 161 aaKnown RBP9.84□□□□□ -0.83
SEC16A-207ENST00000453963 CD24P25063 80 aa9.84□□□□□ -0.83
SEC16A-207ENST00000453963 B3GALT5-AS1P59052 145 aa9.84□□□□□ -0.83
SEC16A-207ENST00000453963 IL15RAQ13261 267 aa9.84□□□□□ -0.83
SEC16A-207ENST00000453963 OVOL1O14753 267 aa9.84□□□□□ -0.83
SEC16A-207ENST00000453963 Q0VFX4 171 aa9.84□□□□□ -0.83
SEC16A-207ENST00000453963 C18orf32Q8TCD1 76 aa9.84□□□□□ -0.83
SEC16A-207ENST00000453963 VOPP1Q96AW1 172 aa9.84□□□□□ -0.83
SEC16A-207ENST00000453963 ERG28Q9UKR5 140 aa9.84□□□□□ -0.83
SEC16A-207ENST00000453963 PCNX2A6NKB5 2137 aa9.83□□□□□ -0.84
SEC16A-207ENST00000453963 FAM231BA6NCW3 169 aa9.83□□□□□ -0.84
SEC16A-207ENST00000453963 HTN3P15516 51 aa9.83□□□□□ -0.84
SEC16A-207ENST00000453963 PAX2Q02962 417 aa9.83□□□□□ -0.84
SEC16A-207ENST00000453963 STHQ8IWL8 128 aa9.83□□□□□ -0.84
SEC16A-207ENST00000453963 TRAV2A0A0B4J234 112 aa9.83□□□□□ -0.84
SEC16A-207ENST00000453963 H0YJW9 148 aa9.83□□□□□ -0.84
SEC16A-207ENST00000453963 IGLC2P0DOY2 106 aa9.83□□□□□ -0.84
SEC16A-207ENST00000453963 IGLC3P0DOY3 106 aa9.83□□□□□ -0.84
SEC16A-207ENST00000453963 VDAC2P45880 294 aaPredicted RBP9.83□□□□□ -0.84
SEC16A-207ENST00000453963 ZNF329Q86UD4 541 aa9.83□□□□□ -0.84
SEC16A-207ENST00000453963 LIME1Q9H400 295 aa9.83□□□□□ -0.84
SEC16A-207ENST00000453963 VWA8A3KMH1 1905 aa9.83□□□□□ -0.84
SEC16A-207ENST00000453963 PLXNA3P51805 1871 aa9.83□□□□□ -0.84
SEC16A-207ENST00000453963 ZSWIM8A7E2V4 1837 aa9.83□□□□□ -0.84
SEC16A-207ENST00000453963 TCF20Q9UGU0 1960 aaKnown RBP9.83□□□□□ -0.84
SEC16A-207ENST00000453963 PTPRDP23468 1912 aa9.83□□□□□ -0.84
SEC16A-207ENST00000453963 TRAV8-4A0A0B4J246 113 aa9.83□□□□□ -0.84
SEC16A-207ENST00000453963 IGHV4-39P01824 125 aa9.83□□□□□ -0.84
SEC16A-207ENST00000453963 GAGE2BQ13066 116 aa9.83□□□□□ -0.84
SEC16A-207ENST00000453963 TMEM95Q3KNT9 176 aa9.83□□□□□ -0.84
SEC16A-207ENST00000453963 CD300EQ496F6 205 aaPredicted RBP9.83□□□□□ -0.84
SEC16A-207ENST00000453963 GAGE2EQ4V326 116 aa9.83□□□□□ -0.84
SEC16A-207ENST00000453963 GAGE2DQ9UEU5 116 aa9.83□□□□□ -0.84
SEC16A-207ENST00000453963 ZNF726P1Q15940 193 aa9.82□□□□□ -0.84
SEC16A-207ENST00000453963 PSG3Q16557 428 aa9.82□□□□□ -0.84
SEC16A-207ENST00000453963 LYPD6BQ8NI32 183 aa9.82□□□□□ -0.84
SEC16A-207ENST00000453963 GLMPQ8WWB7 406 aa9.82□□□□□ -0.84
SEC16A-207ENST00000453963 PHF3Q92576 2039 aaKnown RBP9.82□□□□□ -0.84
SEC16A-207ENST00000453963 IGKV2-40A0A087WW87 121 aaPredicted RBP9.82□□□□□ -0.84
SEC16A-207ENST00000453963 MLNRO43193 412 aa9.82□□□□□ -0.84
SEC16A-207ENST00000453963 IGKV2D-40P01614 121 aaPredicted RBP9.82□□□□□ -0.84
SEC16A-207ENST00000453963 WNT2P09544 360 aa9.82□□□□□ -0.84
SEC16A-207ENST00000453963 PRB3Q04118 309 aaPredicted RBP9.82□□□□□ -0.84
SEC16A-207ENST00000453963 A0A1B0GUS0 222 aa9.82□□□□□ -0.84
SEC16A-207ENST00000453963 A0A1W2PRX2 142 aa9.82□□□□□ -0.84
SEC16A-207ENST00000453963 MMP23AO75900 390 aa9.82□□□□□ -0.84
SEC16A-207ENST00000453963 GAGE1Q13065 139 aa9.82□□□□□ -0.84
SEC16A-207ENST00000453963 MDS2Q8NDY4 140 aa9.82□□□□□ -0.84
SEC16A-207ENST00000453963 THSD7BQ9C0I4 1608 aa9.82□□□□□ -0.84
SEC16A-207ENST00000453963 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.82□□□□□ -0.84
SEC16A-207ENST00000453963 IGHV1-8P0DP01 117 aa9.82□□□□□ -0.84
SEC16A-207ENST00000453963 PAX8Q06710 450 aa9.82□□□□□ -0.84
SEC16A-207ENST00000453963 CT83Q5H943 113 aa9.82□□□□□ -0.84
SEC16A-207ENST00000453963 IGHV2-26A0A0B4J1V2 119 aa9.81□□□□□ -0.84
SEC16A-207ENST00000453963 ZC2HC1BQ5TFG8 222 aa9.81□□□□□ -0.84
SEC16A-207ENST00000453963 TMEM200BQ69YZ2 307 aa9.81□□□□□ -0.84
SEC16A-207ENST00000453963 ZFAND6Q6FIF0 208 aa9.81□□□□□ -0.84
SEC16A-207ENST00000453963 ZNF492Q9P255 531 aa9.81□□□□□ -0.84
SEC16A-207ENST00000453963 TRGV11A0A075B6L2 103 aa9.81□□□□□ -0.84
SEC16A-207ENST00000453963 TMEM238C9JI98 176 aa9.81□□□□□ -0.84
SEC16A-207ENST00000453963 LHFPL4Q7Z7J7 247 aa9.81□□□□□ -0.84
SEC16A-207ENST00000453963 DLX4Q92988 240 aaPredicted RBP9.81□□□□□ -0.84
SEC16A-207ENST00000453963 FANCMQ8IYD8 2048 aa9.81□□□□□ -0.84
SEC16A-207ENST00000453963 SH2D1AO60880 128 aa9.81□□□□□ -0.84
SEC16A-207ENST00000453963 ZNF138P52744 262 aa9.81□□□□□ -0.84
SEC16A-207ENST00000453963 LINC00205P59089 165 aa9.81□□□□□ -0.84
SEC16A-207ENST00000453963 ZNF672Q499Z4 452 aaPredicted RBP9.81□□□□□ -0.84
SEC16A-207ENST00000453963 OCIAD2Q56VL3 154 aa9.81□□□□□ -0.84
SEC16A-207ENST00000453963 Q6ZWC4 215 aa9.81□□□□□ -0.84
SEC16A-207ENST00000453963 IGKV1D-17A0A075B6S4 117 aa9.8□□□□□ -0.84
SEC16A-207ENST00000453963 Q86TA4 180 aa9.8□□□□□ -0.84
SEC16A-207ENST00000453963 HS3ST6Q96QI5 342 aa9.8□□□□□ -0.84
SEC16A-207ENST00000453963 CUL9Q8IWT3 2517 aa9.8□□□□□ -0.84
SEC16A-207ENST00000453963 TRAV8-1A0A0A6YYK1 113 aa9.8□□□□□ -0.84
SEC16A-207ENST00000453963 OOSP1A8MZH6 123 aa9.8□□□□□ -0.84
SEC16A-207ENST00000453963 PRR31Q5SQ13 230 aa9.8□□□□□ -0.84
SEC16A-207ENST00000453963 Q6ZS92 163 aa9.8□□□□□ -0.84
SEC16A-207ENST00000453963 CST9LQ9H4G1 147 aa9.8□□□□□ -0.84
SEC16A-207ENST00000453963 SLC25A15Q9Y619 301 aa9.8□□□□□ -0.84
SEC16A-207ENST00000453963 IGHV1-3A0A0C4DH29 117 aa9.8□□□□□ -0.84
SEC16A-207ENST00000453963 LMO1P25800 156 aa9.8□□□□□ -0.84
SEC16A-207ENST00000453963 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.8□□□□□ -0.84
SEC16A-207ENST00000453963 LINC00479Q96M42 142 aa9.8□□□□□ -0.84
SEC16A-207ENST00000453963 SLC25A20O43772 301 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms