RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 S100A7P31151 101 aa10.55□□□□□ -0.72
HSPG2-207ENST00000453796 RAP2BP61225 183 aa10.55□□□□□ -0.72
HSPG2-207ENST00000453796 RBMY1FQ15415 496 aaKnown RBP10.55□□□□□ -0.72
HSPG2-207ENST00000453796 SAMD13Q5VXD3 122 aa10.55□□□□□ -0.72
HSPG2-207ENST00000453796 NRARPQ7Z6K4 114 aa10.55□□□□□ -0.72
HSPG2-207ENST00000453796 LINC00052Q96N35 136 aa10.55□□□□□ -0.72
HSPG2-207ENST00000453796 UHRF2Q96PU4 802 aa10.55□□□□□ -0.72
HSPG2-207ENST00000453796 RSG1Q9BU20 258 aa10.55□□□□□ -0.72
HSPG2-207ENST00000453796 BATF3Q9NR55 127 aa10.55□□□□□ -0.72
HSPG2-207ENST00000453796 IGHV4-28A0A0C4DH34 117 aa10.54□□□□□ -0.72
HSPG2-207ENST00000453796 A0A0J9YX75 114 aa10.54□□□□□ -0.72
HSPG2-207ENST00000453796 A8MTW9 85 aa10.54□□□□□ -0.72
HSPG2-207ENST00000453796 JTBO76095 146 aa10.54□□□□□ -0.72
HSPG2-207ENST00000453796 NUTF2P61970 127 aaKnown RBP10.54□□□□□ -0.72
HSPG2-207ENST00000453796 ZNF546Q86UE3 836 aa10.54□□□□□ -0.72
HSPG2-207ENST00000453796 ZNF709Q8N972 641 aa10.54□□□□□ -0.72
HSPG2-207ENST00000453796 PHLDA1Q8WV24 401 aaPredicted RBP10.54□□□□□ -0.72
HSPG2-207ENST00000453796 C16orf92Q96LL3 132 aa10.54□□□□□ -0.72
HSPG2-207ENST00000453796 MGST2Q99735 147 aa10.54□□□□□ -0.72
HSPG2-207ENST00000453796 C1QTNF4Q9BXJ3 329 aa10.54□□□□□ -0.72
HSPG2-207ENST00000453796 ARL6Q9H0F7 186 aa10.54□□□□□ -0.72
HSPG2-207ENST00000453796 LYRM2Q9NU23 88 aaPredicted RBP10.54□□□□□ -0.72
HSPG2-207ENST00000453796 XCL2Q9UBD3 114 aa10.54□□□□□ -0.72
HSPG2-207ENST00000453796 TRAV8-2A0A0B4J237 113 aa10.53□□□□□ -0.72
HSPG2-207ENST00000453796 IGSF23A1L1A6 192 aa10.53□□□□□ -0.72
HSPG2-207ENST00000453796 F6UB75 175 aa10.53□□□□□ -0.72
HSPG2-207ENST00000453796 MRPS12O15235 138 aaKnown RBP10.53□□□□□ -0.72
HSPG2-207ENST00000453796 CST7O76096 145 aa10.53□□□□□ -0.72
HSPG2-207ENST00000453796 OR5G3P0C626 314 aa10.53□□□□□ -0.72
HSPG2-207ENST00000453796 BCAP31P51572 246 aa10.53□□□□□ -0.72
HSPG2-207ENST00000453796 CAV2P51636 162 aa10.53□□□□□ -0.72
HSPG2-207ENST00000453796 NANOS2P60321 138 aaKnown RBP10.53□□□□□ -0.72
HSPG2-207ENST00000453796 VWC2Q2TAL6 325 aa10.53□□□□□ -0.72
HSPG2-207ENST00000453796 PXDC1Q5TGL8 231 aa10.53□□□□□ -0.72
HSPG2-207ENST00000453796 SPATA31B1PQ5VZV4 182 aa10.53□□□□□ -0.72
HSPG2-207ENST00000453796 TMEM252Q8N6L7 170 aa10.53□□□□□ -0.72
HSPG2-207ENST00000453796 C11orf45Q8TAV5 145 aa10.53□□□□□ -0.72
HSPG2-207ENST00000453796 MARVELD1Q9BSK0 173 aa10.53□□□□□ -0.72
HSPG2-207ENST00000453796 ARV1Q9H2C2 271 aa10.53□□□□□ -0.72
HSPG2-207ENST00000453796 GPN1Q9HCN4 374 aaPredicted RBP10.53□□□□□ -0.72
HSPG2-207ENST00000453796 RPRMQ9NS64 109 aa10.53□□□□□ -0.72
HSPG2-207ENST00000453796 ELOA3CA0A087WX78 387 aaPredicted RBP10.52□□□□□ -0.73
HSPG2-207ENST00000453796 A0A087X0K7 114 aa10.52□□□□□ -0.73
HSPG2-207ENST00000453796 INMT-MINDY4F8WBC2 141 aa10.52□□□□□ -0.73
HSPG2-207ENST00000453796 GOSR2O14653 212 aa10.52□□□□□ -0.73
HSPG2-207ENST00000453796 PRAF2O60831 178 aa10.52□□□□□ -0.73
HSPG2-207ENST00000453796 IGKV3-20P01619 116 aa10.52□□□□□ -0.73
HSPG2-207ENST00000453796 RPL7P18124 248 aaKnown RBP10.52□□□□□ -0.73
HSPG2-207ENST00000453796 PVALBP20472 110 aaPredicted RBP10.52□□□□□ -0.73
HSPG2-207ENST00000453796 S100A10P60903 97 aa10.52□□□□□ -0.73
HSPG2-207ENST00000453796 ZNF705AQ6ZN79 300 aaPredicted RBP10.52□□□□□ -0.73
HSPG2-207ENST00000453796 MFFQ9GZY8 342 aa10.52□□□□□ -0.73
HSPG2-207ENST00000453796 HRH4Q9H3N8 390 aa10.52□□□□□ -0.73
HSPG2-207ENST00000453796 WDR83OSQ9Y284 106 aa10.52□□□□□ -0.73
HSPG2-207ENST00000453796 ZNF705FA8MVS1 300 aaPredicted RBP10.51□□□□□ -0.73
HSPG2-207ENST00000453796 SIX6O95475 246 aa10.51□□□□□ -0.73
HSPG2-207ENST00000453796 ZNF705DP0CH99 300 aaPredicted RBP10.51□□□□□ -0.73
HSPG2-207ENST00000453796 ZNF705BP0CI00 300 aaPredicted RBP10.51□□□□□ -0.73
HSPG2-207ENST00000453796 SULT1A1P50225 295 aa10.51□□□□□ -0.73
HSPG2-207ENST00000453796 FXYD7P58549 80 aa10.51□□□□□ -0.73
HSPG2-207ENST00000453796 PRR20EP86478 221 aa10.51□□□□□ -0.73
HSPG2-207ENST00000453796 PRR20CP86479 221 aa10.51□□□□□ -0.73
HSPG2-207ENST00000453796 PRR20DP86480 221 aa10.51□□□□□ -0.73
HSPG2-207ENST00000453796 PRR20BP86481 221 aa10.51□□□□□ -0.73
HSPG2-207ENST00000453796 PRR20AP86496 221 aa10.51□□□□□ -0.73
HSPG2-207ENST00000453796 FAM78BQ5VT40 261 aa10.51□□□□□ -0.73
HSPG2-207ENST00000453796 IGFL4Q6B9Z1 124 aa10.51□□□□□ -0.73
HSPG2-207ENST00000453796 AMTNQ6UX39 209 aa10.51□□□□□ -0.73
HSPG2-207ENST00000453796 OR4B1Q8NGF8 309 aa10.51□□□□□ -0.73
HSPG2-207ENST00000453796 TMEM37Q8WXS4 190 aa10.51□□□□□ -0.73
HSPG2-207ENST00000453796 LINC00476Q8WZB0 136 aa10.51□□□□□ -0.73
HSPG2-207ENST00000453796 SLC35B3Q9H1N7 401 aa10.51□□□□□ -0.73
HSPG2-207ENST00000453796 UQCC1Q9NVA1 299 aa10.51□□□□□ -0.73
HSPG2-207ENST00000453796 S100A11P31949 105 aa10.5□□□□□ -0.73
HSPG2-207ENST00000453796 CAMLGP49069 296 aa10.5□□□□□ -0.73
HSPG2-207ENST00000453796 MORN5Q5VZ52 161 aa10.5□□□□□ -0.73
HSPG2-207ENST00000453796 EBLN2Q6P2I7 272 aa10.5□□□□□ -0.73
HSPG2-207ENST00000453796 LINC00305Q7Z4B0 112 aa10.5□□□□□ -0.73
HSPG2-207ENST00000453796 S100A7AQ86SG5 101 aa10.5□□□□□ -0.73
HSPG2-207ENST00000453796 NEU1Q99519 415 aa10.5□□□□□ -0.73
HSPG2-207ENST00000453796 NMES1Q9C002 83 aa10.5□□□□□ -0.73
HSPG2-207ENST00000453796 KLK5Q9Y337 293 aaPredicted RBP10.5□□□□□ -0.73
HSPG2-207ENST00000453796 KMT2AQ03164 3969 aa10.49□□□□□ -0.73
HSPG2-207ENST00000453796 H0YIZ8 118 aa10.49□□□□□ -0.73
HSPG2-207ENST00000453796 PSG9Q00887 426 aa10.49□□□□□ -0.73
HSPG2-207ENST00000453796 MIC13Q5XKP0 118 aa10.49□□□□□ -0.73
HSPG2-207ENST00000453796 RNF182Q8N6D2 247 aa10.49□□□□□ -0.73
HSPG2-207ENST00000453796 CHAC2Q8WUX2 184 aa10.49□□□□□ -0.73
HSPG2-207ENST00000453796 RNF24Q9Y225 148 aa10.49□□□□□ -0.73
HSPG2-207ENST00000453796 COX7A2P2O60397 106 aa10.48□□□□□ -0.73
HSPG2-207ENST00000453796 CXCL3P19876 107 aa10.48□□□□□ -0.73
HSPG2-207ENST00000453796 HLA-DMBP28068 263 aa10.48□□□□□ -0.73
HSPG2-207ENST00000453796 RPL29P47914 159 aaKnown RBP10.48□□□□□ -0.73
HSPG2-207ENST00000453796 H2BFSP57053 126 aa10.48□□□□□ -0.73
HSPG2-207ENST00000453796 DEFA1P59665 94 aa10.48□□□□□ -0.73
HSPG2-207ENST00000453796 DEFA3P59666 94 aa10.48□□□□□ -0.73
HSPG2-207ENST00000453796 HBG1P69891 147 aa10.48□□□□□ -0.73
HSPG2-207ENST00000453796 HBG2P69892 147 aa10.48□□□□□ -0.73
HSPG2-207ENST00000453796 FGL1Q08830 312 aa10.48□□□□□ -0.73
HSPG2-207ENST00000453796 OPCMLQ14982 345 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms