RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 C9orf139Q6ZV77 190 aa12.58□□□□□ -0.4
SNX17-204ENST00000453453 ARL6IP6Q8N6S5 226 aa12.58□□□□□ -0.4
SNX17-204ENST00000453453 STPG3Q8N7X2 389 aa12.58□□□□□ -0.4
SNX17-204ENST00000453453 NPBQ8NG41 125 aa12.58□□□□□ -0.4
SNX17-204ENST00000453453 TMEM14BQ9NUH8 114 aa12.58□□□□□ -0.4
SNX17-204ENST00000453453 TECRQ9NZ01 308 aaKnown RBP12.58□□□□□ -0.4
SNX17-204ENST00000453453 OR51B2Q9Y5P1 312 aa12.58□□□□□ -0.4
SNX17-204ENST00000453453 NOTCH2Q04721 2471 aa12.57□□□□□ -0.4
SNX17-204ENST00000453453 FLNBO75369 2602 aaKnown RBP12.57□□□□□ -0.4
SNX17-204ENST00000453453 CSMD1Q96PZ7 3565 aa12.57□□□□□ -0.4
SNX17-204ENST00000453453 HELTA6NFD8 242 aa12.57□□□□□ -0.4
SNX17-204ENST00000453453 HYPMO75409 117 aa12.57□□□□□ -0.4
SNX17-204ENST00000453453 NPY1RP25929 384 aa12.57□□□□□ -0.4
SNX17-204ENST00000453453 SPINK9Q5DT21 86 aa12.57□□□□□ -0.4
SNX17-204ENST00000453453 FAM120AOSQ5T036 256 aa12.57□□□□□ -0.4
SNX17-204ENST00000453453 Q8N6K4 173 aa12.57□□□□□ -0.4
SNX17-204ENST00000453453 CHRDL1Q9BU40 450 aa12.57□□□□□ -0.4
SNX17-204ENST00000453453 ENY2Q9NPA8 101 aa12.57□□□□□ -0.4
SNX17-204ENST00000453453 ZNF257Q9Y2Q1 563 aa12.57□□□□□ -0.4
SNX17-204ENST00000453453 SIGLEC9Q9Y336 463 aa12.57□□□□□ -0.4
SNX17-204ENST00000453453 A0A1W2PRE2 83 aa12.56□□□□□ -0.4
SNX17-204ENST00000453453 IZUMO1RA6ND01 250 aa12.56□□□□□ -0.4
SNX17-204ENST00000453453 NCBP2LA6PVI3 153 aaKnown RBP12.56□□□□□ -0.4
SNX17-204ENST00000453453 NDUFA3O95167 84 aa12.56□□□□□ -0.4
SNX17-204ENST00000453453 TAS2R45P59539 299 aa12.56□□□□□ -0.4
SNX17-204ENST00000453453 HSPE1P61604 102 aaKnown RBP12.56□□□□□ -0.4
SNX17-204ENST00000453453 KRTAP1-1Q07627 177 aa12.56□□□□□ -0.4
SNX17-204ENST00000453453 DMRTA1Q5VZB9 504 aa12.56□□□□□ -0.4
SNX17-204ENST00000453453 PPP1R27Q86WC6 154 aa12.56□□□□□ -0.4
SNX17-204ENST00000453453 TXN2Q99757 166 aa12.56□□□□□ -0.4
SNX17-204ENST00000453453 FBXL15Q9H469 300 aa12.56□□□□□ -0.4
SNX17-204ENST00000453453 ZNF430Q9H8G1 570 aaPredicted RBP12.56□□□□□ -0.4
SNX17-204ENST00000453453 CRYGBP07316 175 aa12.55□□□□□ -0.4
SNX17-204ENST00000453453 RPS20P60866 119 aaKnown RBP12.55□□□□□ -0.4
SNX17-204ENST00000453453 KLF5Q13887 457 aaPredicted RBP12.55□□□□□ -0.4
SNX17-204ENST00000453453 BATFQ16520 125 aa12.55□□□□□ -0.4
SNX17-204ENST00000453453 FAM231DQ6ZW35 169 aa12.55□□□□□ -0.4
SNX17-204ENST00000453453 NIT1Q86X76 327 aa12.55□□□□□ -0.4
SNX17-204ENST00000453453 SLC24A4Q8NFF2 622 aa12.55□□□□□ -0.4
SNX17-204ENST00000453453 BORCS7Q96B45 105 aa12.55□□□□□ -0.4
SNX17-204ENST00000453453 HINT2Q9BX68 163 aa12.55□□□□□ -0.4
SNX17-204ENST00000453453 MRPL32Q9BYC8 188 aaKnown RBP12.55□□□□□ -0.4
SNX17-204ENST00000453453 F2Z2F3 143 aa12.55□□□□□ -0.4
SNX17-204ENST00000453453 K7EP13 123 aa12.55□□□□□ -0.4
SNX17-204ENST00000453453 BMPR1BO00238 502 aa12.55□□□□□ -0.4
SNX17-204ENST00000453453 C3orf79P0CE67 100 aa12.55□□□□□ -0.4
SNX17-204ENST00000453453 CD33P20138 364 aa12.55□□□□□ -0.4
SNX17-204ENST00000453453 C5orf64Q2M2E5 130 aa12.55□□□□□ -0.4
SNX17-204ENST00000453453 DEFB112Q30KQ8 113 aa12.55□□□□□ -0.4
SNX17-204ENST00000453453 Q6ZN92 141 aa12.55□□□□□ -0.4
SNX17-204ENST00000453453 OR1L8Q8NGR8 309 aa12.55□□□□□ -0.4
SNX17-204ENST00000453453 TPSG1Q9NRR2 321 aa12.55□□□□□ -0.4
SNX17-204ENST00000453453 TET2Q6N021 2002 aaPredicted RBP12.54□□□□□ -0.4
SNX17-204ENST00000453453 CSPG4Q6UVK1 2322 aa12.54□□□□□ -0.4
SNX17-204ENST00000453453 TEX50A0A1B0GTY4 177 aa12.54□□□□□ -0.4
SNX17-204ENST00000453453 H3BUX3 64 aa12.54□□□□□ -0.4
SNX17-204ENST00000453453 LINC00869P0C866 280 aa12.54□□□□□ -0.4
SNX17-204ENST00000453453 PCP4P48539 62 aa12.54□□□□□ -0.4
SNX17-204ENST00000453453 PRCDQ00LT1 54 aa12.54□□□□□ -0.4
SNX17-204ENST00000453453 SCGB2A2Q13296 93 aa12.54□□□□□ -0.4
SNX17-204ENST00000453453 TNXAQ16473 311 aa12.54□□□□□ -0.4
SNX17-204ENST00000453453 LEMD1Q68G75 181 aa12.54□□□□□ -0.4
SNX17-204ENST00000453453 BCL6BQ8N143 479 aaPredicted RBP12.54□□□□□ -0.4
SNX17-204ENST00000453453 C22orf15Q8WYQ4 148 aa12.54□□□□□ -0.4
SNX17-204ENST00000453453 RASL11BQ9BPW5 248 aa12.54□□□□□ -0.4
SNX17-204ENST00000453453 PLEKHA3Q9HB20 300 aa12.54□□□□□ -0.4
SNX17-204ENST00000453453 SEPSECSQ9HD40 501 aaKnown RBP12.54□□□□□ -0.4
SNX17-204ENST00000453453 SOX21Q9Y651 276 aaPredicted RBP12.54□□□□□ -0.4
SNX17-204ENST00000453453 ZANQ9Y493 2812 aa12.53□□□□□ -0.4
SNX17-204ENST00000453453 SETXQ7Z333 2677 aaKnown RBP12.53□□□□□ -0.4
SNX17-204ENST00000453453 TEX15Q9BXT5 2789 aa12.53□□□□□ -0.4
SNX17-204ENST00000453453 TCF21O43680 179 aa12.53□□□□□ -0.4
SNX17-204ENST00000453453 NDUFB8O95169 186 aa12.53□□□□□ -0.4
SNX17-204ENST00000453453 CA2P00918 260 aa12.53□□□□□ -0.4
SNX17-204ENST00000453453 APCSP02743 223 aa12.53□□□□□ -0.4
SNX17-204ENST00000453453 TSKUQ8WUA8 353 aa12.53□□□□□ -0.4
SNX17-204ENST00000453453 SSMEM1Q8WWF3 244 aa12.53□□□□□ -0.4
SNX17-204ENST00000453453 IGF2BP2-AS1Q96M15 143 aa12.53□□□□□ -0.4
SNX17-204ENST00000453453 SLC25A33Q9BSK2 321 aa12.53□□□□□ -0.4
SNX17-204ENST00000453453 TMEM160Q9NX00 188 aa12.53□□□□□ -0.4
SNX17-204ENST00000453453 MOB4Q9Y3A3 225 aa12.53□□□□□ -0.4
SNX17-204ENST00000453453 RNF114Q9Y508 228 aa12.53□□□□□ -0.4
SNX17-204ENST00000453453 A0A1W2PN81 502 aa12.52□□□□□ -0.4
SNX17-204ENST00000453453 CNIH1O95406 144 aa12.52□□□□□ -0.4
SNX17-204ENST00000453453 SRIP30626 198 aa12.52□□□□□ -0.4
SNX17-204ENST00000453453 RPL27AP46776 148 aaKnown RBP12.52□□□□□ -0.4
SNX17-204ENST00000453453 SPATA31B1PQ5VZV4 182 aa12.52□□□□□ -0.4
SNX17-204ENST00000453453 STPG4Q8N801 248 aa12.52□□□□□ -0.4
SNX17-204ENST00000453453 ZNF738Q8NE65 137 aa12.52□□□□□ -0.4
SNX17-204ENST00000453453 FAM103A1Q9BTL3 118 aaKnown RBP12.52□□□□□ -0.4
SNX17-204ENST00000453453 ZNF331Q9NQX6 463 aaPredicted RBP12.52□□□□□ -0.4
SNX17-204ENST00000453453 COX11Q9Y6N1 276 aa12.52□□□□□ -0.4
SNX17-204ENST00000453453 TRAV9-2A0A087WT02 112 aa12.51□□□□□ -0.41
SNX17-204ENST00000453453 OR2J3O76001 311 aa12.51□□□□□ -0.41
SNX17-204ENST00000453453 PMCHP20382 165 aa12.51□□□□□ -0.41
SNX17-204ENST00000453453 TSPOP30536 169 aa12.51□□□□□ -0.41
SNX17-204ENST00000453453 UBE2V1Q13404 147 aa12.51□□□□□ -0.41
SNX17-204ENST00000453453 FBLN7Q53RD9 439 aa12.51□□□□□ -0.41
SNX17-204ENST00000453453 IBA57Q5T440 356 aaKnown RBP12.51□□□□□ -0.41
SNX17-204ENST00000453453 IL17RELQ6ZVW7 336 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms