RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 TRAV2A0A0B4J234 112 aa8.92□□□□□ -0.98
LINC00339-205ENST00000452322 OR4C46A6NHA9 309 aa8.92□□□□□ -0.98
LINC00339-205ENST00000452322 RPL7P18124 248 aaKnown RBP8.92□□□□□ -0.98
LINC00339-205ENST00000452322 RPL11P62913 178 aaKnown RBP8.92□□□□□ -0.98
LINC00339-205ENST00000452322 PAFAH1B2P68402 229 aa8.92□□□□□ -0.98
LINC00339-205ENST00000452322 SERF2P84101 59 aa8.92□□□□□ -0.98
LINC00339-205ENST00000452322 GCSAMLQ5JQS6 135 aa8.92□□□□□ -0.98
LINC00339-205ENST00000452322 LEMD1Q68G75 181 aa8.92□□□□□ -0.98
LINC00339-205ENST00000452322 ZNF471Q9BX82 626 aaPredicted RBP8.92□□□□□ -0.98
LINC00339-205ENST00000452322 SLC25A32Q9H2D1 315 aa8.92□□□□□ -0.98
LINC00339-205ENST00000452322 RFNGQ9Y644 331 aa8.92□□□□□ -0.98
LINC00339-205ENST00000452322 IGKV3-7A0A075B6H7 116 aa8.91□□□□□ -0.98
LINC00339-205ENST00000452322 M6PRP20645 277 aa8.91□□□□□ -0.98
LINC00339-205ENST00000452322 GALR1P47211 349 aa8.91□□□□□ -0.98
LINC00339-205ENST00000452322 EIF5AP63241 154 aaKnown RBP8.91□□□□□ -0.98
LINC00339-205ENST00000452322 ACOT6Q3I5F7 207 aaPredicted RBP8.91□□□□□ -0.98
LINC00339-205ENST00000452322 FAM78BQ5VT40 261 aa8.91□□□□□ -0.98
LINC00339-205ENST00000452322 MORN5Q5VZ52 161 aa8.91□□□□□ -0.98
LINC00339-205ENST00000452322 GTSCR1Q86UQ5 136 aa8.91□□□□□ -0.98
LINC00339-205ENST00000452322 C9orf62Q8N4C0 152 aa8.91□□□□□ -0.98
LINC00339-205ENST00000452322 PRR25Q96S07 402 aa8.91□□□□□ -0.98
LINC00339-205ENST00000452322 MRPL32Q9BYC8 188 aaKnown RBP8.91□□□□□ -0.98
LINC00339-205ENST00000452322 SH3BGRL3Q9H299 93 aa8.91□□□□□ -0.98
LINC00339-205ENST00000452322 MS4A6AQ9H2W1 248 aa8.91□□□□□ -0.98
LINC00339-205ENST00000452322 NRN1Q9NPD7 142 aa8.91□□□□□ -0.98
LINC00339-205ENST00000452322 AURKAIP1Q9NWT8 199 aaPredicted RBP8.91□□□□□ -0.98
LINC00339-205ENST00000452322 DNASE2O00115 360 aaPredicted RBP8.9□□□□□ -0.98
LINC00339-205ENST00000452322 MBP02144 154 aa8.9□□□□□ -0.98
LINC00339-205ENST00000452322 BPIFA4PQ86YQ2 179 aa8.9□□□□□ -0.98
LINC00339-205ENST00000452322 GBGT1Q8N5D6 347 aa8.9□□□□□ -0.98
LINC00339-205ENST00000452322 STXBP6Q8NFX7 210 aa8.9□□□□□ -0.98
LINC00339-205ENST00000452322 STOML3Q8TAV4 291 aa8.9□□□□□ -0.98
LINC00339-205ENST00000452322 DCANP1Q8TF63 244 aa8.9□□□□□ -0.98
LINC00339-205ENST00000452322 SEPSECSQ9HD40 501 aaKnown RBP8.9□□□□□ -0.98
LINC00339-205ENST00000452322 FUT9Q9Y231 359 aa8.9□□□□□ -0.98
LINC00339-205ENST00000452322 K7EQG2 157 aa8.89□□□□□ -0.99
LINC00339-205ENST00000452322 MRPS12O15235 138 aaKnown RBP8.89□□□□□ -0.99
LINC00339-205ENST00000452322 SPP1P10451 314 aa8.89□□□□□ -0.99
LINC00339-205ENST00000452322 TPT1P13693 172 aaKnown RBP8.89□□□□□ -0.99
LINC00339-205ENST00000452322 C4BPBP20851 252 aa8.89□□□□□ -0.99
LINC00339-205ENST00000452322 TFPI2P48307 235 aa8.89□□□□□ -0.99
LINC00339-205ENST00000452322 MEOX2P50222 304 aa8.89□□□□□ -0.99
LINC00339-205ENST00000452322 RHOBP62745 196 aa8.89□□□□□ -0.99
LINC00339-205ENST00000452322 SMAD5-AS1Q9Y6J3 95 aa8.89□□□□□ -0.99
LINC00339-205ENST00000452322 MEGF8Q7Z7M0 2845 aa8.89□□□□□ -0.99
LINC00339-205ENST00000452322 A0A087X0K7 114 aa8.88□□□□□ -0.99
LINC00339-205ENST00000452322 TRAV5A0A0B4J249 113 aa8.88□□□□□ -0.99
LINC00339-205ENST00000452322 CD7P09564 240 aa8.88□□□□□ -0.99
LINC00339-205ENST00000452322 SEC11BP0C7V7 166 aa8.88□□□□□ -0.99
LINC00339-205ENST00000452322 ATF4P18848 351 aaPredicted RBP8.88□□□□□ -0.99
LINC00339-205ENST00000452322 CD81P60033 236 aa8.88□□□□□ -0.99
LINC00339-205ENST00000452322 RAB2AP61019 212 aa8.88□□□□□ -0.99
LINC00339-205ENST00000452322 SAMD13Q5VXD3 122 aa8.88□□□□□ -0.99
LINC00339-205ENST00000452322 SPATA31B1PQ5VZV4 182 aa8.88□□□□□ -0.99
LINC00339-205ENST00000452322 MIR17HGQ75NE6 70 aa8.88□□□□□ -0.99
LINC00339-205ENST00000452322 WFDC3Q8IUB2 231 aa8.88□□□□□ -0.99
LINC00339-205ENST00000452322 BAP18Q8IXM2 172 aa8.88□□□□□ -0.99
LINC00339-205ENST00000452322 OR10G4Q8NGN3 311 aa8.88□□□□□ -0.99
LINC00339-205ENST00000452322 OR10G9Q8NGN4 311 aa8.88□□□□□ -0.99
LINC00339-205ENST00000452322 OR10G7Q8NGN6 311 aa8.88□□□□□ -0.99
LINC00339-205ENST00000452322 FAM110AQ9BQ89 295 aa8.88□□□□□ -0.99
LINC00339-205ENST00000452322 SLC25A2Q9BXI2 301 aa8.88□□□□□ -0.99
LINC00339-205ENST00000452322 TMEM14CQ9P0S9 112 aa8.88□□□□□ -0.99
LINC00339-205ENST00000452322 FBN3Q75N90 2809 aa8.88□□□□□ -0.99
LINC00339-205ENST00000452322 A0A1W2PPV4 95 aa8.87□□□□□ -0.99
LINC00339-205ENST00000452322 SOCS3O14543 225 aa8.87□□□□□ -0.99
LINC00339-205ENST00000452322 PRB2P02812 416 aaPredicted RBP8.87□□□□□ -0.99
LINC00339-205ENST00000452322 IGLC2P0DOY2 106 aa8.87□□□□□ -0.99
LINC00339-205ENST00000452322 NKX2-5P52952 324 aaPredicted RBP8.87□□□□□ -0.99
LINC00339-205ENST00000452322 CMC4P56277 68 aaPredicted RBP8.87□□□□□ -0.99
LINC00339-205ENST00000452322 TAS2R45P59539 299 aa8.87□□□□□ -0.99
LINC00339-205ENST00000452322 TMEM41BQ5BJD5 291 aa8.87□□□□□ -0.99
LINC00339-205ENST00000452322 FAM122CQ6P4D5 195 aa8.87□□□□□ -0.99
LINC00339-205ENST00000452322 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.87□□□□□ -0.99
LINC00339-205ENST00000452322 SLC51BQ86UW2 128 aa8.87□□□□□ -0.99
LINC00339-205ENST00000452322 Q8N1Y9 231 aa8.87□□□□□ -0.99
LINC00339-205ENST00000452322 RPP25LQ8N5L8 163 aaKnown RBP8.87□□□□□ -0.99
LINC00339-205ENST00000452322 FAM167A-AS1Q96KT0 104 aa8.87□□□□□ -0.99
LINC00339-205ENST00000452322 C17orf77Q96MU5 243 aa8.87□□□□□ -0.99
LINC00339-205ENST00000452322 K7EIL1 84 aa8.86□□□□□ -0.99
LINC00339-205ENST00000452322 CDC34P49427 236 aaPredicted RBP8.86□□□□□ -0.99
LINC00339-205ENST00000452322 DEFA6Q01524 100 aa8.86□□□□□ -0.99
LINC00339-205ENST00000452322 ODF3L2Q3SX64 289 aa8.86□□□□□ -0.99
LINC00339-205ENST00000452322 KHDC3LQ587J8 217 aa8.86□□□□□ -0.99
LINC00339-205ENST00000452322 AKR1C8PQ5T2L2 129 aa8.86□□□□□ -0.99
LINC00339-205ENST00000452322 FAM24BQ8N5W8 94 aa8.86□□□□□ -0.99
LINC00339-205ENST00000452322 HRH4Q9H3N8 390 aa8.86□□□□□ -0.99
LINC00339-205ENST00000452322 MAP6D1Q9H9H5 199 aa8.86□□□□□ -0.99
LINC00339-205ENST00000452322 RPRMQ9NS64 109 aa8.86□□□□□ -0.99
LINC00339-205ENST00000452322 C19orf73Q9NVV2 129 aa8.86□□□□□ -0.99
LINC00339-205ENST00000452322 OR11H12B2RN74 326 aa8.86□□□□□ -0.99
LINC00339-205ENST00000452322 ISLRO14498 428 aa8.86□□□□□ -0.99
LINC00339-205ENST00000452322 HIST1H1EP10412 219 aaKnown RBP8.86□□□□□ -0.99
LINC00339-205ENST00000452322 ID1P41134 155 aa8.86□□□□□ -0.99
LINC00339-205ENST00000452322 PSMB3P49720 205 aa8.86□□□□□ -0.99
LINC00339-205ENST00000452322 SNRPD3P62318 126 aaKnown RBP8.86□□□□□ -0.99
LINC00339-205ENST00000452322 GUK1Q16774 197 aa8.86□□□□□ -0.99
LINC00339-205ENST00000452322 EIF5AL1Q6IS14 154 aaKnown RBP8.86□□□□□ -0.99
LINC00339-205ENST00000452322 LCN15Q6UWW0 184 aa8.86□□□□□ -0.99
LINC00339-205ENST00000452322 ACTR3CQ9C0K3 210 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms