RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 PAX9P55771 341 aa6.69□□□□□ -1.34
COL8A1-203ENST00000452013 CMC4P56277 68 aaPredicted RBP6.69□□□□□ -1.34
COL8A1-203ENST00000452013 NHLH2Q02577 135 aa6.69□□□□□ -1.34
COL8A1-203ENST00000452013 PNRC1Q12796 327 aaPredicted RBP6.69□□□□□ -1.34
COL8A1-203ENST00000452013 SOHLH1Q5JUK2 328 aa6.69□□□□□ -1.34
COL8A1-203ENST00000452013 IQCF2Q8IXL9 164 aa6.69□□□□□ -1.34
COL8A1-203ENST00000452013 TMEM61Q8N0U2 210 aa6.69□□□□□ -1.34
COL8A1-203ENST00000452013 Q8N1Y9 231 aa6.69□□□□□ -1.34
COL8A1-203ENST00000452013 OR10P1Q8NGE3 313 aa6.69□□□□□ -1.34
COL8A1-203ENST00000452013 OR5C1Q8NGR4 320 aa6.69□□□□□ -1.34
COL8A1-203ENST00000452013 SCGB1C1Q8TD33 95 aa6.69□□□□□ -1.34
COL8A1-203ENST00000452013 SPAG8Q99932 426 aaPredicted RBP6.69□□□□□ -1.34
COL8A1-203ENST00000452013 B9D2Q9BPU9 175 aa6.69□□□□□ -1.34
COL8A1-203ENST00000452013 SCRT1Q9BWW7 348 aa6.69□□□□□ -1.34
COL8A1-203ENST00000452013 ZFAND3Q9H8U3 227 aa6.69□□□□□ -1.34
COL8A1-203ENST00000452013 TIMM9Q9Y5J7 89 aa6.69□□□□□ -1.34
COL8A1-203ENST00000452013 MEGF8Q7Z7M0 2845 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 IGHV3-49A0A0A0MS15 119 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 C7orf77A4D0Y5 90 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 RBFOX3A6NFN3 312 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 FAM24AA6NFZ4 105 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 OR4C46A6NHA9 309 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 A8MZ25 164 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 IFNA1P01562 189 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 MBP02144 154 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 S100A6P06703 90 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 PSG1P11464 419 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 CRYBB3P26998 211 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 CD81P60033 236 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 ZNF506Q5JVG8 444 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 OR8G2PQ6IF36 304 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 TMEM88Q6PEY1 159 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 TMEM14EPQ6UXP3 125 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 TMEM144Q7Z5S9 345 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 CBLN2Q8IUK8 224 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 HSD17B11Q8NBQ5 300 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 OR51G1Q8NGK1 321 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 FAM213BQ8TBF2 198 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 RXFP4Q8TDU9 374 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 ZNF414Q96IQ9 312 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 TRGV9Q99603 122 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 GGACTQ9BVM4 153 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 VSIRQ9H7M9 311 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 NPVFQ9HCQ7 196 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 RPS10P5Q9NQ39 176 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 TMEM242Q9NWH2 141 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 PLA2G2EQ9NZK7 142 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 WNK1Q9H4A3 2382 aa6.68□□□□□ -1.34
COL8A1-203ENST00000452013 CMYA5Q8N3K9 4069 aa6.67□□□□□ -1.34
COL8A1-203ENST00000452013 IGSF23A1L1A6 192 aa6.67□□□□□ -1.34
COL8A1-203ENST00000452013 SMCO3A2RU48 225 aa6.67□□□□□ -1.34
COL8A1-203ENST00000452013 PMS2P5A8MQ11 134 aa6.67□□□□□ -1.34
COL8A1-203ENST00000452013 OR11H12B2RN74 326 aa6.67□□□□□ -1.34
COL8A1-203ENST00000452013 PRSS46E5RG02 174 aa6.67□□□□□ -1.34
COL8A1-203ENST00000452013 FNDC10F2Z333 226 aa6.67□□□□□ -1.34
COL8A1-203ENST00000452013 M0R036 132 aa6.67□□□□□ -1.34
COL8A1-203ENST00000452013 IL4P05112 153 aa6.67□□□□□ -1.34
COL8A1-203ENST00000452013 METTL15P1P0C7V9 234 aa6.67□□□□□ -1.34
COL8A1-203ENST00000452013 SMIM6P0DI80 62 aa6.67□□□□□ -1.34
COL8A1-203ENST00000452013 IGHV4-30-4P0DP06 118 aa6.67□□□□□ -1.34
COL8A1-203ENST00000452013 S100A7P31151 101 aa6.67□□□□□ -1.34
COL8A1-203ENST00000452013 RPL11P62913 178 aaKnown RBP6.67□□□□□ -1.34
COL8A1-203ENST00000452013 DLK1P80370 383 aa6.67□□□□□ -1.34
COL8A1-203ENST00000452013 TMEM182Q6ZP80 229 aaPredicted RBP6.67□□□□□ -1.34
COL8A1-203ENST00000452013 TCF24Q7RTU0 167 aa6.67□□□□□ -1.34
COL8A1-203ENST00000452013 THAP8Q8NA92 274 aa6.67□□□□□ -1.34
COL8A1-203ENST00000452013 MBD3L1Q8WWY6 194 aa6.67□□□□□ -1.34
COL8A1-203ENST00000452013 RNF2Q99496 336 aa6.67□□□□□ -1.34
COL8A1-203ENST00000452013 RABAC1Q9UI14 185 aa6.67□□□□□ -1.34
COL8A1-203ENST00000452013 SELENOKQ9Y6D0 94 aa6.67□□□□□ -1.34
COL8A1-203ENST00000452013 TNCP24821 2201 aa6.66□□□□□ -1.34
COL8A1-203ENST00000452013 IGKV1D-37A0A075B6S9 117 aa6.66□□□□□ -1.34
COL8A1-203ENST00000452013 IGHV3OR16-13A0A075B7E8 117 aa6.66□□□□□ -1.34
COL8A1-203ENST00000452013 IGHV3-74A0A0B4J1X5 117 aa6.66□□□□□ -1.34
COL8A1-203ENST00000452013 IGHV3-66A0A0C4DH42 116 aa6.66□□□□□ -1.34
COL8A1-203ENST00000452013 HELTA6NFD8 242 aa6.66□□□□□ -1.34
COL8A1-203ENST00000452013 AGPAT2O15120 278 aa6.66□□□□□ -1.34
COL8A1-203ENST00000452013 APOHP02749 345 aaPredicted RBP6.66□□□□□ -1.34
COL8A1-203ENST00000452013 S100A9P06702 114 aaKnown RBP6.66□□□□□ -1.34
COL8A1-203ENST00000452013 CD7P09564 240 aa6.66□□□□□ -1.34
COL8A1-203ENST00000452013 ZNF90Q03938 601 aa6.66□□□□□ -1.34
COL8A1-203ENST00000452013 FAM90A2PQ658T7 463 aa6.66□□□□□ -1.34
COL8A1-203ENST00000452013 S100A7AQ86SG5 101 aa6.66□□□□□ -1.34
COL8A1-203ENST00000452013 SFT2D1Q8WV19 159 aa6.66□□□□□ -1.34
COL8A1-203ENST00000452013 HIST1H2BAQ96A08 127 aa6.66□□□□□ -1.34
COL8A1-203ENST00000452013 RNF125Q96EQ8 232 aa6.66□□□□□ -1.34
COL8A1-203ENST00000452013 TVP23CQ96ET8 276 aa6.66□□□□□ -1.34
COL8A1-203ENST00000452013 NIPSNAP3BQ9BS92 247 aa6.66□□□□□ -1.34
COL8A1-203ENST00000452013 SAV1Q9H4B6 383 aaPredicted RBP6.66□□□□□ -1.34
COL8A1-203ENST00000452013 C19orf73Q9NVV2 129 aa6.66□□□□□ -1.34
COL8A1-203ENST00000452013 U3KQE9 123 aa6.66□□□□□ -1.34
COL8A1-203ENST00000452013 IGKV3-7A0A075B6H7 116 aa6.65□□□□□ -1.34
COL8A1-203ENST00000452013 TRAV2A0A0B4J234 112 aa6.65□□□□□ -1.34
COL8A1-203ENST00000452013 ZNF98A6NK75 572 aa6.65□□□□□ -1.34
COL8A1-203ENST00000452013 UBE2CO00762 179 aa6.65□□□□□ -1.34
COL8A1-203ENST00000452013 SRP19P09132 144 aaKnown RBP6.65□□□□□ -1.34
COL8A1-203ENST00000452013 FRMD6-AS1P0C7T7 363 aa6.65□□□□□ -1.34
COL8A1-203ENST00000452013 RAB5AP20339 215 aa6.65□□□□□ -1.34
COL8A1-203ENST00000452013 SELENOTP62341 195 aa6.65□□□□□ -1.34
COL8A1-203ENST00000452013 RAB31Q13636 194 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms