RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 RYR3Q15413 4870 aa16.16■□□□□ 0.18
C9orf3-208ENST00000451893 TRAV30A0A087WSZ9 112 aa16.16■□□□□ 0.18
C9orf3-208ENST00000451893 LCE6AA0A183 80 aa16.16■□□□□ 0.18
C9orf3-208ENST00000451893 RAB19A4D1S5 217 aa16.16■□□□□ 0.18
C9orf3-208ENST00000451893 FABP1P07148 127 aa16.16■□□□□ 0.18
C9orf3-208ENST00000451893 H2AFB1P0C5Y9 115 aa16.16■□□□□ 0.18
C9orf3-208ENST00000451893 APOC4P55056 127 aa16.16■□□□□ 0.18
C9orf3-208ENST00000451893 PRR20EP86478 221 aa16.16■□□□□ 0.18
C9orf3-208ENST00000451893 PRR20CP86479 221 aa16.16■□□□□ 0.18
C9orf3-208ENST00000451893 PRR20DP86480 221 aa16.16■□□□□ 0.18
C9orf3-208ENST00000451893 PRR20BP86481 221 aa16.16■□□□□ 0.18
C9orf3-208ENST00000451893 PRR20AP86496 221 aa16.16■□□□□ 0.18
C9orf3-208ENST00000451893 SLC7A5P1Q8MH63 180 aa16.16■□□□□ 0.18
C9orf3-208ENST00000451893 EIF4E3Q8N5X7 224 aaKnown RBP16.16■□□□□ 0.18
C9orf3-208ENST00000451893 MBD3L1Q8WWY6 194 aa16.16■□□□□ 0.18
C9orf3-208ENST00000451893 TXN2Q99757 166 aa16.16■□□□□ 0.18
C9orf3-208ENST00000451893 ACTR3CQ9C0K3 210 aaPredicted RBP16.16■□□□□ 0.18
C9orf3-208ENST00000451893 DNAH7Q8WXX0 4024 aa16.16■□□□□ 0.18
C9orf3-208ENST00000451893 TSPAN4O14817 238 aa16.15■□□□□ 0.18
C9orf3-208ENST00000451893 SCGB2A1O75556 95 aa16.15■□□□□ 0.18
C9orf3-208ENST00000451893 BMI1P35226 326 aa16.15■□□□□ 0.18
C9orf3-208ENST00000451893 NPBWR1P48145 328 aa16.15■□□□□ 0.18
C9orf3-208ENST00000451893 RND2P52198 227 aa16.15■□□□□ 0.18
C9orf3-208ENST00000451893 B2MP61769 119 aa16.15■□□□□ 0.18
C9orf3-208ENST00000451893 CYP2G1PQ6ZSU1 146 aa16.15■□□□□ 0.18
C9orf3-208ENST00000451893 COMMD7Q86VX2 200 aa16.15■□□□□ 0.18
C9orf3-208ENST00000451893 OR10G4Q8NGN3 311 aa16.15■□□□□ 0.18
C9orf3-208ENST00000451893 OR10G9Q8NGN4 311 aa16.15■□□□□ 0.18
C9orf3-208ENST00000451893 OR10G7Q8NGN6 311 aa16.15■□□□□ 0.18
C9orf3-208ENST00000451893 SLC39A9Q9NUM3 307 aa16.15■□□□□ 0.18
C9orf3-208ENST00000451893 RFNGQ9Y644 331 aa16.15■□□□□ 0.18
C9orf3-208ENST00000451893 K7EMT4 169 aa16.14■□□□□ 0.17
C9orf3-208ENST00000451893 OR10J1P30954 320 aa16.14■□□□□ 0.17
C9orf3-208ENST00000451893 FCGR2BP31994 310 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-208ENST00000451893 IGKV1OR2-108A0A075B7D4 117 aa16.13■□□□□ 0.17
C9orf3-208ENST00000451893 ZFP92A6NM28 416 aa16.13■□□□□ 0.17
C9orf3-208ENST00000451893 CLN5O75503 358 aa16.13■□□□□ 0.17
C9orf3-208ENST00000451893 IGHV3-48P01763 117 aa16.13■□□□□ 0.17
C9orf3-208ENST00000451893 ADMP35318 185 aa16.13■□□□□ 0.17
C9orf3-208ENST00000451893 MIC13Q5XKP0 118 aa16.13■□□□□ 0.17
C9orf3-208ENST00000451893 STPG3Q8N7X2 389 aa16.13■□□□□ 0.17
C9orf3-208ENST00000451893 RNF2Q99496 336 aa16.13■□□□□ 0.17
C9orf3-208ENST00000451893 HRH4Q9H3N8 390 aa16.13■□□□□ 0.17
C9orf3-208ENST00000451893 IGKV3-7A0A075B6H7 116 aa16.12■□□□□ 0.17
C9orf3-208ENST00000451893 CTXND1A0A1B0GTU2 59 aa16.12■□□□□ 0.17
C9orf3-208ENST00000451893 CTSGP08311 255 aa16.12■□□□□ 0.17
C9orf3-208ENST00000451893 LINC00869P0C866 280 aa16.12■□□□□ 0.17
C9orf3-208ENST00000451893 S100A1P23297 94 aa16.12■□□□□ 0.17
C9orf3-208ENST00000451893 FHITP49789 147 aa16.12■□□□□ 0.17
C9orf3-208ENST00000451893 UQCC3Q6UW78 93 aa16.12■□□□□ 0.17
C9orf3-208ENST00000451893 RPP25LQ8N5L8 163 aaKnown RBP16.12■□□□□ 0.17
C9orf3-208ENST00000451893 IGHV3-49A0A0A0MS15 119 aa16.11■□□□□ 0.17
C9orf3-208ENST00000451893 IGHV7-4-1A0A0J9YVY3 117 aa16.11■□□□□ 0.17
C9orf3-208ENST00000451893 ATP6V1G1O75348 118 aa16.11■□□□□ 0.17
C9orf3-208ENST00000451893 TFPI2P48307 235 aa16.11■□□□□ 0.17
C9orf3-208ENST00000451893 PMS2P11Q13670 270 aa16.11■□□□□ 0.17
C9orf3-208ENST00000451893 SFT2D1Q8WV19 159 aa16.11■□□□□ 0.17
C9orf3-208ENST00000451893 RHPN1-AS1Q9BWJ2 59 aa16.11■□□□□ 0.17
C9orf3-208ENST00000451893 VSIRQ9H7M9 311 aa16.11■□□□□ 0.17
C9orf3-208ENST00000451893 SMPXQ9UHP9 88 aa16.11■□□□□ 0.17
C9orf3-208ENST00000451893 IGKV1D-37A0A075B6S9 117 aa16.1■□□□□ 0.17
C9orf3-208ENST00000451893 A0A1W2PPV4 95 aa16.1■□□□□ 0.17
C9orf3-208ENST00000451893 F8W735 103 aaPredicted RBP16.1■□□□□ 0.17
C9orf3-208ENST00000451893 RHOBP62745 196 aa16.1■□□□□ 0.17
C9orf3-208ENST00000451893 PAFAH1B2P68402 229 aa16.1■□□□□ 0.17
C9orf3-208ENST00000451893 BPIFCQ8NFQ6 507 aa16.1■□□□□ 0.17
C9orf3-208ENST00000451893 OR1L4Q8NGR5 311 aa16.1■□□□□ 0.17
C9orf3-208ENST00000451893 GATAD1Q8WUU5 269 aa16.1■□□□□ 0.17
C9orf3-208ENST00000451893 PFDN5Q99471 154 aa16.1■□□□□ 0.17
C9orf3-208ENST00000451893 MRPL36Q9P0J6 103 aaKnown RBP16.1■□□□□ 0.17
C9orf3-208ENST00000451893 IGLC1P0CG04 106 aa16.09■□□□□ 0.17
C9orf3-208ENST00000451893 RPL35AP18077 110 aaKnown RBP16.09■□□□□ 0.17
C9orf3-208ENST00000451893 CMC4P56277 68 aaPredicted RBP16.09■□□□□ 0.17
C9orf3-208ENST00000451893 PBDC1Q9BVG4 233 aa16.09■□□□□ 0.17
C9orf3-208ENST00000451893 SMDT1Q9H4I9 107 aa16.09■□□□□ 0.17
C9orf3-208ENST00000451893 IGHV3OR16-13A0A075B7E8 117 aa16.08■□□□□ 0.16
C9orf3-208ENST00000451893 ELOA3CA0A087WX78 387 aaPredicted RBP16.08■□□□□ 0.16
C9orf3-208ENST00000451893 IGHV3-74A0A0B4J1X5 117 aa16.08■□□□□ 0.16
C9orf3-208ENST00000451893 UBE2CO00762 179 aa16.08■□□□□ 0.16
C9orf3-208ENST00000451893 CHEK1O14757 476 aa16.08■□□□□ 0.16
C9orf3-208ENST00000451893 CDC34P49427 236 aaPredicted RBP16.08■□□□□ 0.16
C9orf3-208ENST00000451893 YPEL3P61236 119 aaPredicted RBP16.08■□□□□ 0.16
C9orf3-208ENST00000451893 RPL11P62913 178 aaKnown RBP16.08■□□□□ 0.16
C9orf3-208ENST00000451893 DEFB135Q30KP9 77 aa16.08■□□□□ 0.16
C9orf3-208ENST00000451893 OVOL2Q9BRP0 275 aa16.08■□□□□ 0.16
C9orf3-208ENST00000451893 MAP1LC3B2A6NCE7 125 aa16.07■□□□□ 0.16
C9orf3-208ENST00000451893 SPRY2O43597 315 aa16.07■□□□□ 0.16
C9orf3-208ENST00000451893 PLP1P60201 277 aa16.07■□□□□ 0.16
C9orf3-208ENST00000451893 ZNF726P1Q15940 193 aa16.07■□□□□ 0.16
C9orf3-208ENST00000451893 FAM122CQ6P4D5 195 aa16.07■□□□□ 0.16
C9orf3-208ENST00000451893 S100A7AQ86SG5 101 aa16.07■□□□□ 0.16
C9orf3-208ENST00000451893 RAB24Q969Q5 203 aa16.07■□□□□ 0.16
C9orf3-208ENST00000451893 MRPL32Q9BYC8 188 aaKnown RBP16.07■□□□□ 0.16
C9orf3-208ENST00000451893 MAP1LC3BQ9GZQ8 125 aa16.07■□□□□ 0.16
C9orf3-208ENST00000451893 DNAJC4Q9NNZ3 241 aa16.07■□□□□ 0.16
C9orf3-208ENST00000451893 TENM2Q9NT68 2774 aa16.06■□□□□ 0.16
C9orf3-208ENST00000451893 CXorf65A6NEN9 183 aa16.06■□□□□ 0.16
C9orf3-208ENST00000451893 DNASE2O00115 360 aaPredicted RBP16.06■□□□□ 0.16
C9orf3-208ENST00000451893 CD5P06127 495 aa16.06■□□□□ 0.16
C9orf3-208ENST00000451893 TAGLN2P37802 199 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms