RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	TMEM182	Q6ZP80	229 aa	Predicted RBP	6.27	□□□□□ -1.41
RFX3-209	ENST00000451859		Q6ZTC4	211 aa		6.27	□□□□□ -1.41
RFX3-209	ENST00000451859	CSNK1G2-AS1	Q8NCQ2	148 aa		6.27	□□□□□ -1.41
RFX3-209	ENST00000451859	C16orf92	Q96LL3	132 aa		6.27	□□□□□ -1.41
RFX3-209	ENST00000451859	RSG1	Q9BU20	258 aa		6.27	□□□□□ -1.41
RFX3-209	ENST00000451859	TMEM147	Q9BVK8	224 aa		6.27	□□□□□ -1.41
RFX3-209	ENST00000451859	SCRT1	Q9BWW7	348 aa		6.27	□□□□□ -1.41
RFX3-209	ENST00000451859	C1QTNF4	Q9BXJ3	329 aa		6.27	□□□□□ -1.41
RFX3-209	ENST00000451859	SLC35B3	Q9H1N7	401 aa		6.27	□□□□□ -1.41
RFX3-209	ENST00000451859	C20orf85	Q9H1P6	137 aa		6.27	□□□□□ -1.41
RFX3-209	ENST00000451859	GSKIP	Q9P0R6	139 aa		6.27	□□□□□ -1.41
RFX3-209	ENST00000451859	HLA-DRB4	X5D2U9	266 aa		6.27	□□□□□ -1.41
RFX3-209	ENST00000451859	TRAV6	A0A075B6T7	132 aa		6.26	□□□□□ -1.41
RFX3-209	ENST00000451859	ZNF98	A6NK75	572 aa		6.26	□□□□□ -1.41
RFX3-209	ENST00000451859	FAM25E	A8MYX2	175 aa		6.26	□□□□□ -1.41
RFX3-209	ENST00000451859	SOCS3	O14543	225 aa		6.26	□□□□□ -1.41
RFX3-209	ENST00000451859	CCS	O14618	274 aa		6.26	□□□□□ -1.41
RFX3-209	ENST00000451859	IL5	P05113	134 aa		6.26	□□□□□ -1.41
RFX3-209	ENST00000451859	OR5G3	P0C626	314 aa		6.26	□□□□□ -1.41
RFX3-209	ENST00000451859	METTL15P1	P0C7V9	234 aa		6.26	□□□□□ -1.41
RFX3-209	ENST00000451859	PRB4	P10163	310 aa	Predicted RBP	6.26	□□□□□ -1.41
RFX3-209	ENST00000451859	GALR1	P47211	349 aa		6.26	□□□□□ -1.41
RFX3-209	ENST00000451859	ID3	Q02535	119 aa		6.26	□□□□□ -1.41
RFX3-209	ENST00000451859	C1orf194	Q5T5A4	169 aa		6.26	□□□□□ -1.41
RFX3-209	ENST00000451859	EBLN2	Q6P2I7	272 aa		6.26	□□□□□ -1.41
RFX3-209	ENST00000451859	FOXI2	Q6ZQN5	318 aa		6.26	□□□□□ -1.41
RFX3-209	ENST00000451859	CYP2G1P	Q6ZSU1	146 aa		6.26	□□□□□ -1.41
RFX3-209	ENST00000451859	OR4D5	Q8NGN0	318 aa		6.26	□□□□□ -1.41
RFX3-209	ENST00000451859	C20orf173	Q96LM9	149 aa		6.26	□□□□□ -1.41
RFX3-209	ENST00000451859	SAV1	Q9H4B6	383 aa	Predicted RBP	6.26	□□□□□ -1.41
RFX3-209	ENST00000451859	SEPSECS	Q9HD40	501 aa	Known RBP	6.26	□□□□□ -1.41
RFX3-209	ENST00000451859	TRAV10	A0A0B4J240	114 aa		6.25	□□□□□ -1.41
RFX3-209	ENST00000451859	ISLR	O14498	428 aa		6.25	□□□□□ -1.41
RFX3-209	ENST00000451859	CFD	P00746	253 aa	Predicted RBP	6.25	□□□□□ -1.41
RFX3-209	ENST00000451859	LINC00869	P0C866	280 aa		6.25	□□□□□ -1.41
RFX3-209	ENST00000451859	ZNF705D	P0CH99	300 aa	Predicted RBP	6.25	□□□□□ -1.41
RFX3-209	ENST00000451859	ZNF705B	P0CI00	300 aa	Predicted RBP	6.25	□□□□□ -1.41
RFX3-209	ENST00000451859	PAX9	P55771	341 aa		6.25	□□□□□ -1.41
RFX3-209	ENST00000451859	RAP2B	P61225	183 aa		6.25	□□□□□ -1.41
RFX3-209	ENST00000451859	FAM78B	Q5VT40	261 aa		6.25	□□□□□ -1.41
RFX3-209	ENST00000451859	LGALS9C	Q6DKI2	356 aa		6.25	□□□□□ -1.41
RFX3-209	ENST00000451859	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		6.25	□□□□□ -1.41
RFX3-209	ENST00000451859	RNF182	Q8N6D2	247 aa		6.25	□□□□□ -1.41
RFX3-209	ENST00000451859	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	6.25	□□□□□ -1.41
RFX3-209	ENST00000451859	UHRF2	Q96PU4	802 aa		6.25	□□□□□ -1.41
RFX3-209	ENST00000451859	C7orf50	Q9BRJ6	194 aa	Known RBP	6.25	□□□□□ -1.41
RFX3-209	ENST00000451859	HRH4	Q9H3N8	390 aa		6.25	□□□□□ -1.41
RFX3-209	ENST00000451859	RPRM	Q9NS64	109 aa		6.25	□□□□□ -1.41
RFX3-209	ENST00000451859	MGAT4C	Q9UBM8	478 aa		6.25	□□□□□ -1.41
RFX3-209	ENST00000451859	HIGD1A	Q9Y241	93 aa		6.25	□□□□□ -1.41
RFX3-209	ENST00000451859	LSM5	Q9Y4Y9	91 aa	Known RBP	6.25	□□□□□ -1.41
RFX3-209	ENST00000451859	IGHV4-4	A0A075B6R2	117 aa		6.24	□□□□□ -1.41
RFX3-209	ENST00000451859		A6NHS1	94 aa		6.24	□□□□□ -1.41
RFX3-209	ENST00000451859	PMS2P5	A8MQ11	134 aa		6.24	□□□□□ -1.41
RFX3-209	ENST00000451859	C11orf94	C9JXX5	98 aa		6.24	□□□□□ -1.41
RFX3-209	ENST00000451859		H3BRN7	92 aa		6.24	□□□□□ -1.41
RFX3-209	ENST00000451859	PLA2G10	O15496	165 aa		6.24	□□□□□ -1.41
RFX3-209	ENST00000451859	LYRM1	O43325	122 aa		6.24	□□□□□ -1.41
RFX3-209	ENST00000451859	MEOX2	P50222	304 aa		6.24	□□□□□ -1.41
RFX3-209	ENST00000451859	PSG9	Q00887	426 aa		6.24	□□□□□ -1.41
RFX3-209	ENST00000451859	SLC38A11	Q08AI6	406 aa		6.24	□□□□□ -1.41
RFX3-209	ENST00000451859	ZNF846	Q147U1	533 aa		6.24	□□□□□ -1.41
RFX3-209	ENST00000451859	TMEM144	Q7Z5S9	345 aa		6.24	□□□□□ -1.41
RFX3-209	ENST00000451859	ZNF709	Q8N972	641 aa		6.24	□□□□□ -1.41
RFX3-209	ENST00000451859	SMIM8	Q96KF7	97 aa		6.24	□□□□□ -1.41
RFX3-209	ENST00000451859	SEC22C	Q9BRL7	303 aa		6.24	□□□□□ -1.41
RFX3-209	ENST00000451859	ARL6	Q9H0F7	186 aa		6.24	□□□□□ -1.41
RFX3-209	ENST00000451859	NUDT15	Q9NV35	164 aa		6.24	□□□□□ -1.41
RFX3-209	ENST00000451859	RCL1	Q9Y2P8	373 aa	Known RBP	6.24	□□□□□ -1.41
RFX3-209	ENST00000451859	NACA	E9PAV3	2078 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	DEFB131B	A0A096LNP1	70 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859		A0A0J9YX75	114 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	C5orf51	A6NDU8	294 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859		L7N2F9	121 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	EREG	O14944	169 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	HYPM	O75409	117 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	MBP	P02686	304 aa	Predicted RBP	6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	TCRB	P04435	133 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	SNRPC	P09234	159 aa	Known RBP	6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	HTN3	P15516	51 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	S100A7	P31151	101 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	BCAP31	P51572	246 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	VAMP2	P63027	116 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	DLK1	P80370	383 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	C12orf74	Q32Q52	190 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	TMEM14EP	Q6UXP3	125 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	ZNF705A	Q6ZN79	300 aa	Predicted RBP	6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	ZNF738	Q8NE65	137 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	OR10P1	Q8NGE3	313 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	MITD1	Q8WV92	249 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	C17orf77	Q96MU5	243 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	SHANK2-AS3	Q9BTD1	123 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	TMEM208	Q9BTX3	173 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	APLN	Q9ULZ1	77 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	SLC45A2	Q9UMX9	530 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	GOLT1B	Q9Y3E0	138 aa		6.23	□□□□□ -1.41
RFX3-209	ENST00000451859	TRAV8-2	A0A0B4J237	113 aa		6.22	□□□□□ -1.41
RFX3-209	ENST00000451859	C7orf66	A4D0T2	115 aa		6.22	□□□□□ -1.41
RFX3-209	ENST00000451859	ZNF705F	A8MVS1	300 aa	Predicted RBP	6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms