RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 GATA2P23769 480 aaPredicted RBP1.8□□□□□ -2.12
USP53-202ENST00000450251 PAX9P55771 341 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 Q6P435 159 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 TMEM158Q8WZ71 300 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 RASL10AQ92737 203 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 IGF2BP2-AS1Q96M15 143 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 COL11A2P13942 1736 aaPredicted RBP1.8□□□□□ -2.12
USP53-202ENST00000450251 LCTP09848 1927 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 TRAV13-2A0A0B4J235 113 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 TRAV21A0A0B4J279 112 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 RS1O15537 224 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 NTF4P34130 210 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 FOXL2NBQ6ZUU3 175 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 SH2D6Q7Z4S9 175 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 PHLDA1Q8WV24 401 aaPredicted RBP1.8□□□□□ -2.12
USP53-202ENST00000450251 DPH3P1Q9H4G8 78 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 LINC00527Q9UJ94 153 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 NLRC5Q86WI3 1866 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 PLXNA4Q9HCM2 1894 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 IGHV3OR15-7A0A075B7D8 119 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 IGLV3-32A0A0A0MS00 114 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 PRR32B1ATL7 298 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 K7EN84 100 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 K7ERJ3 54 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 IGKV1-5P01602 117 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 IL11RAQ14626 422 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 FAM201AQ5SY85 155 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 CFAP126Q5VTH2 177 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 ZAR1Q86SH2 424 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 SERP2Q8N6R1 65 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 METTL26Q96S19 204 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 TMEM74BQ9NUR3 256 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 ZDBF2Q9HCK1 2354 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 A0A0J9YW62 118 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 CELA3BP08861 270 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 VPREB1P12018 145 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 VEGFBP49765 207 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 GFERP55789 205 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 TMEM196Q5HYL7 178 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 MRPL14Q6P1L8 145 aaKnown RBP1.79□□□□□ -2.12
USP53-202ENST00000450251 ZNF826PQ6ZT77 177 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 Q8TCH9 128 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 BRK1Q8WUW1 75 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 ELSPBP1Q96BH3 223 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 CALYQ9NYX4 217 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 ACACBO00763 2458 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 IGKV1D-13A0A0B4J2D9 117 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 VCYO14598 125 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 IGKV1-13P0DP09 117 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 DTX1Q86Y01 620 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 GATD1Q8NB37 220 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 JMJD8Q96S16 334 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 TIMM21Q9BVV7 248 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 MDFICQ9P1T7 246 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 RNF7Q9UBF6 113 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 ALPK3Q96L96 1907 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 MYO10Q9HD67 2058 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 TP53BP1Q12888 1972 aaPredicted RBP1.79□□□□□ -2.12
USP53-202ENST00000450251 EP400Q96L91 3159 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 SMCHD1A6NHR9 2005 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 TRAV8-3A0A0A6YYJ7 113 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 IGHV3-43A0A0B4J1X8 118 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 C17orf98A8MV24 154 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 DEFB108AA8MXU0 73 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 ZNHIT1O43257 154 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 CXCL13O43927 109 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 NUPR1O60356 82 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 SH2D1AO60880 128 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 SS18L1O75177 396 aaPredicted RBP1.79□□□□□ -2.12
USP53-202ENST00000450251 IGHV3-43DP0DP04 118 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 LIFP15018 202 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 PSG4Q00888 419 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 TMEM200BQ69YZ2 307 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 LYZL1Q6UWQ5 148 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 ZNRF2Q8NHG8 242 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 WFDC12Q8WWY7 111 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 FGF22Q9HCT0 170 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 PLA2G2EQ9NZK7 142 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 ICOSQ9Y6W8 199 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 ZNF318Q5VUA4 2279 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 CASP8AP2Q9UKL3 1982 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 TRAV40A0A0B4J280 105 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 IGKV1-9A0A0C4DH69 117 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 LOC101059948A0A1B0GTJ6 334 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 CCDC179H3BU77 68 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 K7EQS6 105 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 M0R381 172 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 LGALS9O00182 355 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 CRYGBP07316 175 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 CTGFP29279 349 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 FXYD2P54710 66 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 SHISA2Q6UWI4 295 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 ZNF493Q6ZR52 646 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 LYZL4Q96KX0 146 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 GREB1Q4ZG55 1949 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 IGKV1D-8A0A087WSZ0 117 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 IGKV1-8A0A0C4DH67 115 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 A0A1B0GXF2 115 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 KLK10O43240 276 aa1.79□□□□□ -2.12
USP53-202ENST00000450251 CD7P09564 240 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms