RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 ZNF705BP0CI00 300 aaPredicted RBP12.49□□□□□ -0.41
CLTCL1-203ENST00000449918 PLP1P60201 277 aa12.49□□□□□ -0.41
CLTCL1-203ENST00000449918 ZNF846Q147U1 533 aa12.49□□□□□ -0.41
CLTCL1-203ENST00000449918 C12orf74Q32Q52 190 aa12.49□□□□□ -0.41
CLTCL1-203ENST00000449918 GSG1LQ6UXU4 331 aa12.49□□□□□ -0.41
CLTCL1-203ENST00000449918 C20orf173Q96LM9 149 aa12.49□□□□□ -0.41
CLTCL1-203ENST00000449918 SHANK2-AS3Q9BTD1 123 aa12.49□□□□□ -0.41
CLTCL1-203ENST00000449918 SCRT1Q9BWW7 348 aa12.49□□□□□ -0.41
CLTCL1-203ENST00000449918 SLC25A39Q9BZJ4 359 aaPredicted RBP12.49□□□□□ -0.41
CLTCL1-203ENST00000449918 RNF24Q9Y225 148 aa12.49□□□□□ -0.41
CLTCL1-203ENST00000449918 GOLT1BQ9Y3E0 138 aa12.49□□□□□ -0.41
CLTCL1-203ENST00000449918 DEFB131BA0A096LNP1 70 aa12.48□□□□□ -0.41
CLTCL1-203ENST00000449918 H3BRN7 92 aa12.48□□□□□ -0.41
CLTCL1-203ENST00000449918 TCRBP04435 133 aa12.48□□□□□ -0.41
CLTCL1-203ENST00000449918 OR5G3P0C626 314 aa12.48□□□□□ -0.41
CLTCL1-203ENST00000449918 LINC00869P0C866 280 aa12.48□□□□□ -0.41
CLTCL1-203ENST00000449918 SPART-AS1P0CW21 52 aa12.48□□□□□ -0.41
CLTCL1-203ENST00000449918 RPL7P18124 248 aaKnown RBP12.48□□□□□ -0.41
CLTCL1-203ENST00000449918 TEPPQ6URK8 271 aa12.48□□□□□ -0.41
CLTCL1-203ENST00000449918 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.48□□□□□ -0.41
CLTCL1-203ENST00000449918 GGACTQ9BVM4 153 aa12.48□□□□□ -0.41
CLTCL1-203ENST00000449918 SLC35B3Q9H1N7 401 aa12.48□□□□□ -0.41
CLTCL1-203ENST00000449918 CELA1Q9UNI1 258 aa12.48□□□□□ -0.41
CLTCL1-203ENST00000449918 RFNGQ9Y644 331 aa12.48□□□□□ -0.41
CLTCL1-203ENST00000449918 K7EPK0 472 aa12.47□□□□□ -0.41
CLTCL1-203ENST00000449918 CCNKO75909 580 aa12.47□□□□□ -0.41
CLTCL1-203ENST00000449918 MBPP02686 304 aaPredicted RBP12.47□□□□□ -0.41
CLTCL1-203ENST00000449918 EMP1P54849 157 aa12.47□□□□□ -0.41
CLTCL1-203ENST00000449918 FGL1Q08830 312 aa12.47□□□□□ -0.41
CLTCL1-203ENST00000449918 C17orf77Q96MU5 243 aa12.47□□□□□ -0.41
CLTCL1-203ENST00000449918 RNF126Q9BV68 326 aa12.47□□□□□ -0.41
CLTCL1-203ENST00000449918 RCL1Q9Y2P8 373 aaKnown RBP12.47□□□□□ -0.41
CLTCL1-203ENST00000449918 IGHV4-4A0A075B6R2 117 aa12.46□□□□□ -0.41
CLTCL1-203ENST00000449918 L7N2F9 121 aa12.46□□□□□ -0.41
CLTCL1-203ENST00000449918 DUSP14O95147 198 aaKnown RBP12.46□□□□□ -0.41
CLTCL1-203ENST00000449918 VAMP2P63027 116 aa12.46□□□□□ -0.41
CLTCL1-203ENST00000449918 PXDC1Q5TGL8 231 aa12.46□□□□□ -0.41
CLTCL1-203ENST00000449918 ZNF767PQ75MW2 155 aa12.46□□□□□ -0.41
CLTCL1-203ENST00000449918 CCDC32Q9BV29 185 aa12.46□□□□□ -0.41
CLTCL1-203ENST00000449918 ARL6Q9H0F7 186 aa12.46□□□□□ -0.41
CLTCL1-203ENST00000449918 TRAV6A0A075B6T7 132 aa12.45□□□□□ -0.42
CLTCL1-203ENST00000449918 TEX48A0A1B0GUV7 120 aa12.45□□□□□ -0.42
CLTCL1-203ENST00000449918 C7orf66A4D0T2 115 aa12.45□□□□□ -0.42
CLTCL1-203ENST00000449918 FAM25EA8MYX2 175 aa12.45□□□□□ -0.42
CLTCL1-203ENST00000449918 GOSR2O14653 212 aa12.45□□□□□ -0.42
CLTCL1-203ENST00000449918 HBE1P02100 147 aa12.45□□□□□ -0.42
CLTCL1-203ENST00000449918 AMBPP02760 352 aa12.45□□□□□ -0.42
CLTCL1-203ENST00000449918 SLC38A11Q08AI6 406 aa12.45□□□□□ -0.42
CLTCL1-203ENST00000449918 ZNF546Q86UE3 836 aa12.45□□□□□ -0.42
CLTCL1-203ENST00000449918 ZNF431Q8TF32 576 aaPredicted RBP12.45□□□□□ -0.42
CLTCL1-203ENST00000449918 NUDT15Q9NV35 164 aa12.45□□□□□ -0.42
CLTCL1-203ENST00000449918 TRAV8-2A0A0B4J237 113 aa12.44□□□□□ -0.42
CLTCL1-203ENST00000449918 C5orf51A6NDU8 294 aa12.44□□□□□ -0.42
CLTCL1-203ENST00000449918 A8MTW9 85 aa12.44□□□□□ -0.42
CLTCL1-203ENST00000449918 CCSO14618 274 aa12.44□□□□□ -0.42
CLTCL1-203ENST00000449918 BCAP31P51572 246 aa12.44□□□□□ -0.42
CLTCL1-203ENST00000449918 PRR20EP86478 221 aa12.44□□□□□ -0.42
CLTCL1-203ENST00000449918 PRR20CP86479 221 aa12.44□□□□□ -0.42
CLTCL1-203ENST00000449918 PRR20DP86480 221 aa12.44□□□□□ -0.42
CLTCL1-203ENST00000449918 PRR20BP86481 221 aa12.44□□□□□ -0.42
CLTCL1-203ENST00000449918 PRR20AP86496 221 aa12.44□□□□□ -0.42
CLTCL1-203ENST00000449918 IGFL4Q6B9Z1 124 aa12.44□□□□□ -0.42
CLTCL1-203ENST00000449918 LINC00299Q6ZSB3 139 aa12.44□□□□□ -0.42
CLTCL1-203ENST00000449918 ZNF738Q8NE65 137 aa12.44□□□□□ -0.42
CLTCL1-203ENST00000449918 LRRC20Q8TCA0 184 aa12.44□□□□□ -0.42
CLTCL1-203ENST00000449918 IGF2BP2-AS1Q96M15 143 aa12.44□□□□□ -0.42
CLTCL1-203ENST00000449918 UHRF2Q96PU4 802 aa12.44□□□□□ -0.42
CLTCL1-203ENST00000449918 ARV1Q9H2C2 271 aa12.44□□□□□ -0.42
CLTCL1-203ENST00000449918 H2AFB2P0C5Z0 115 aa12.43□□□□□ -0.42
CLTCL1-203ENST00000449918 CNN1P51911 297 aaKnown RBP12.43□□□□□ -0.42
CLTCL1-203ENST00000449918 ARL16Q0P5N6 197 aa12.43□□□□□ -0.42
CLTCL1-203ENST00000449918 RAB31Q13636 194 aa12.43□□□□□ -0.42
CLTCL1-203ENST00000449918 RRN3P1Q2M238 152 aa12.43□□□□□ -0.42
CLTCL1-203ENST00000449918 AMTNQ6UX39 209 aa12.43□□□□□ -0.42
CLTCL1-203ENST00000449918 C1orf158Q8N1D5 194 aa12.43□□□□□ -0.42
CLTCL1-203ENST00000449918 C12orf45Q8N5I9 185 aaPredicted RBP12.43□□□□□ -0.42
CLTCL1-203ENST00000449918 RNF182Q8N6D2 247 aa12.43□□□□□ -0.42
CLTCL1-203ENST00000449918 TMEM208Q9BTX3 173 aa12.43□□□□□ -0.42
CLTCL1-203ENST00000449918 LSM5Q9Y4Y9 91 aaKnown RBP12.43□□□□□ -0.42
CLTCL1-203ENST00000449918 BIRC6Q9NR09 4857 aa12.43□□□□□ -0.42
CLTCL1-203ENST00000449918 A0A087X0K7 114 aa12.42□□□□□ -0.42
CLTCL1-203ENST00000449918 AGPAT2O15120 278 aa12.42□□□□□ -0.42
CLTCL1-203ENST00000449918 PVALBP20472 110 aaPredicted RBP12.42□□□□□ -0.42
CLTCL1-203ENST00000449918 CAV2P51636 162 aa12.42□□□□□ -0.42
CLTCL1-203ENST00000449918 MZT2BQ6NZ67 158 aa12.42□□□□□ -0.42
CLTCL1-203ENST00000449918 PATE2Q6UY27 113 aa12.42□□□□□ -0.42
CLTCL1-203ENST00000449918 C2orf50Q96LR7 162 aa12.42□□□□□ -0.42
CLTCL1-203ENST00000449918 SEC22CQ9BRL7 303 aa12.42□□□□□ -0.42
CLTCL1-203ENST00000449918 NIPSNAP3BQ9BS92 247 aa12.42□□□□□ -0.42
CLTCL1-203ENST00000449918 NDUFAF3Q9BU61 184 aa12.42□□□□□ -0.42
CLTCL1-203ENST00000449918 DKK2Q9UBU2 259 aa12.42□□□□□ -0.42
CLTCL1-203ENST00000449918 LOC102723971A0A1B0GUV8 181 aa12.41□□□□□ -0.42
CLTCL1-203ENST00000449918 FAM240BA0A1B0GVZ2 78 aa12.41□□□□□ -0.42
CLTCL1-203ENST00000449918 B2MP61769 119 aa12.41□□□□□ -0.42
CLTCL1-203ENST00000449918 FAM222AQ5U5X8 452 aa12.41□□□□□ -0.42
CLTCL1-203ENST00000449918 LINC00305Q7Z4B0 112 aa12.41□□□□□ -0.42
CLTCL1-203ENST00000449918 OR11H7Q8NGC8 314 aa12.41□□□□□ -0.42
CLTCL1-203ENST00000449918 S100ZQ8WXG8 99 aa12.41□□□□□ -0.42
CLTCL1-203ENST00000449918 KMT2AQ03164 3969 aa12.4□□□□□ -0.42
CLTCL1-203ENST00000449918 COX7A2P2O60397 106 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms