RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 STHQ8IWL8 128 aa11.4□□□□□ -0.58
ITGB4-202ENST00000449880 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.4□□□□□ -0.58
ITGB4-202ENST00000449880 DSCR9P59020 149 aa11.4□□□□□ -0.58
ITGB4-202ENST00000449880 Q86TA4 180 aa11.4□□□□□ -0.58
ITGB4-202ENST00000449880 GGTLC3B5MD39 225 aa11.4□□□□□ -0.59
ITGB4-202ENST00000449880 TMEM133Q9H2Q1 129 aa11.4□□□□□ -0.59
ITGB4-202ENST00000449880 TSSC4Q9Y5U2 329 aaPredicted RBP11.39□□□□□ -0.59
ITGB4-202ENST00000449880 SFTA2Q6UW10 78 aa11.39□□□□□ -0.59
ITGB4-202ENST00000449880 DMRTC2Q8IXT2 367 aaPredicted RBP11.39□□□□□ -0.59
ITGB4-202ENST00000449880 A0A1W2PPM0 123 aa11.39□□□□□ -0.59
ITGB4-202ENST00000449880 CD33P20138 364 aa11.39□□□□□ -0.59
ITGB4-202ENST00000449880 Q6P435 159 aa11.39□□□□□ -0.59
ITGB4-202ENST00000449880 ZC2HC1BQ5TFG8 222 aa11.39□□□□□ -0.59
ITGB4-202ENST00000449880 GGNQ86UU5 652 aa11.39□□□□□ -0.59
ITGB4-202ENST00000449880 RPUSD1Q9UJJ7 312 aaKnown RBP11.39□□□□□ -0.59
ITGB4-202ENST00000449880 THADAQ6YHU6 1953 aa11.39□□□□□ -0.59
ITGB4-202ENST00000449880 A0A0G2JRQ6 117 aa11.38□□□□□ -0.59
ITGB4-202ENST00000449880 C11orf52Q96A22 123 aa11.38□□□□□ -0.59
ITGB4-202ENST00000449880 RSPO3Q9BXY4 272 aaPredicted RBP11.38□□□□□ -0.59
ITGB4-202ENST00000449880 IL15RAQ13261 267 aa11.38□□□□□ -0.59
ITGB4-202ENST00000449880 BVES-AS1Q5T3Y7 98 aa11.38□□□□□ -0.59
ITGB4-202ENST00000449880 BMPERQ8N8U9 685 aa11.38□□□□□ -0.59
ITGB4-202ENST00000449880 V9GYV3 84 aa11.38□□□□□ -0.59
ITGB4-202ENST00000449880 TRGV11A0A075B6L2 103 aa11.38□□□□□ -0.59
ITGB4-202ENST00000449880 SH2D1AO60880 128 aa11.38□□□□□ -0.59
ITGB4-202ENST00000449880 CELA3BP08861 270 aa11.38□□□□□ -0.59
ITGB4-202ENST00000449880 CCL3L1P16619 93 aa11.38□□□□□ -0.59
ITGB4-202ENST00000449880 TMEM75Q8N9X5 138 aa11.38□□□□□ -0.59
ITGB4-202ENST00000449880 PLSCR4Q9NRQ2 329 aa11.38□□□□□ -0.59
ITGB4-202ENST00000449880 CD28P10747 220 aa11.38□□□□□ -0.59
ITGB4-202ENST00000449880 Q0VFX4 171 aa11.38□□□□□ -0.59
ITGB4-202ENST00000449880 ZNF726P1Q15940 193 aa11.38□□□□□ -0.59
ITGB4-202ENST00000449880 NEGR1Q7Z3B1 354 aa11.38□□□□□ -0.59
ITGB4-202ENST00000449880 TOMM7Q9P0U1 55 aa11.38□□□□□ -0.59
ITGB4-202ENST00000449880 RTTNQ86VV8 2226 aa11.37□□□□□ -0.59
ITGB4-202ENST00000449880 IGLC7A0M8Q6 106 aa11.37□□□□□ -0.59
ITGB4-202ENST00000449880 GAGE12HA6NDE8 117 aa11.37□□□□□ -0.59
ITGB4-202ENST00000449880 SRRM5B3KS81 715 aa11.37□□□□□ -0.59
ITGB4-202ENST00000449880 SRSF8Q9BRL6 282 aaKnown RBP11.37□□□□□ -0.59
ITGB4-202ENST00000449880 NUP210Q8TEM1 1887 aaPredicted RBP11.37□□□□□ -0.59
ITGB4-202ENST00000449880 TMEM8BA6NDV4 472 aa11.37□□□□□ -0.59
ITGB4-202ENST00000449880 PAX9P55771 341 aa11.37□□□□□ -0.59
ITGB4-202ENST00000449880 SPACA3Q8IXA5 215 aa11.37□□□□□ -0.59
ITGB4-202ENST00000449880 PYGO2Q9BRQ0 406 aa11.37□□□□□ -0.59
ITGB4-202ENST00000449880 ZDBF2Q9HCK1 2354 aa11.37□□□□□ -0.59
ITGB4-202ENST00000449880 IGLL1P15814 213 aa11.37□□□□□ -0.59
ITGB4-202ENST00000449880 DPH3P1Q9H4G8 78 aa11.37□□□□□ -0.59
ITGB4-202ENST00000449880 SELLP14151 372 aa11.37□□□□□ -0.59
ITGB4-202ENST00000449880 PDE6HQ13956 83 aa11.37□□□□□ -0.59
ITGB4-202ENST00000449880 TMEM158Q8WZ71 300 aa11.36□□□□□ -0.59
ITGB4-202ENST00000449880 OR11H6Q8NGC7 330 aa11.36□□□□□ -0.59
ITGB4-202ENST00000449880 MBNL3Q9NUK0 354 aaKnown RBP11.36□□□□□ -0.59
ITGB4-202ENST00000449880 CMC4P56277 68 aaPredicted RBP11.36□□□□□ -0.59
ITGB4-202ENST00000449880 SPRR3Q9UBC9 169 aa11.36□□□□□ -0.59
ITGB4-202ENST00000449880 SLAQ13239 276 aa11.36□□□□□ -0.59
ITGB4-202ENST00000449880 Q6ZRM9 215 aa11.36□□□□□ -0.59
ITGB4-202ENST00000449880 STPG4Q8N801 248 aa11.36□□□□□ -0.59
ITGB4-202ENST00000449880 FGFBP3Q8TAT2 258 aa11.36□□□□□ -0.59
ITGB4-202ENST00000449880 WIPF2Q8TF74 440 aaPredicted RBP11.36□□□□□ -0.59
ITGB4-202ENST00000449880 SPAG8Q99932 426 aaPredicted RBP11.36□□□□□ -0.59
ITGB4-202ENST00000449880 IGHV3OR16-8A0A075B7F1 116 aa11.35□□□□□ -0.59
ITGB4-202ENST00000449880 RPL15P61313 204 aaKnown RBP11.35□□□□□ -0.59
ITGB4-202ENST00000449880 INTS1Q8N201 2190 aaKnown RBP11.35□□□□□ -0.59
ITGB4-202ENST00000449880 GVINP1Q7Z2Y8 2422 aa11.35□□□□□ -0.59
ITGB4-202ENST00000449880 SNRNP200O75643 2136 aaKnown RBP11.35□□□□□ -0.59
ITGB4-202ENST00000449880 IGHV2-70DA0A0C4DH43 119 aa11.35□□□□□ -0.59
ITGB4-202ENST00000449880 NCR2O95944 276 aa11.35□□□□□ -0.59
ITGB4-202ENST00000449880 KLF5Q13887 457 aaPredicted RBP11.35□□□□□ -0.59
ITGB4-202ENST00000449880 SLC25A20O43772 301 aa11.35□□□□□ -0.59
ITGB4-202ENST00000449880 WNT2P09544 360 aa11.35□□□□□ -0.59
ITGB4-202ENST00000449880 PRSS46E5RG02 174 aa11.35□□□□□ -0.59
ITGB4-202ENST00000449880 VCYO14598 125 aa11.35□□□□□ -0.59
ITGB4-202ENST00000449880 MALP21145 153 aa11.35□□□□□ -0.59
ITGB4-202ENST00000449880 DTX2Q86UW9 622 aa11.35□□□□□ -0.59
ITGB4-202ENST00000449880 TRAV12-3A0A0B4J271 114 aa11.34□□□□□ -0.59
ITGB4-202ENST00000449880 H3BMM0 161 aa11.34□□□□□ -0.59
ITGB4-202ENST00000449880 IL18BPO95998 194 aa11.34□□□□□ -0.59
ITGB4-202ENST00000449880 CD7P09564 240 aa11.34□□□□□ -0.59
ITGB4-202ENST00000449880 UBE2WQ96B02 151 aa11.34□□□□□ -0.59
ITGB4-202ENST00000449880 HELZP42694 1942 aaKnown RBP11.34□□□□□ -0.59
ITGB4-202ENST00000449880 NOTCH4Q99466 2003 aa11.34□□□□□ -0.59
ITGB4-202ENST00000449880 C9orf153Q5TBE3 101 aa11.34□□□□□ -0.59
ITGB4-202ENST00000449880 C1orf147Q96MC9 270 aaPredicted RBP11.34□□□□□ -0.59
ITGB4-202ENST00000449880 A0A1B0GUS0 222 aa11.34□□□□□ -0.59
ITGB4-202ENST00000449880 RNASE2P10153 161 aaKnown RBP11.34□□□□□ -0.59
ITGB4-202ENST00000449880 IFITM1P13164 125 aa11.33□□□□□ -0.59
ITGB4-202ENST00000449880 PMS2P5A8MQ11 134 aa11.33□□□□□ -0.6
ITGB4-202ENST00000449880 SCRT1Q9BWW7 348 aa11.33□□□□□ -0.6
ITGB4-202ENST00000449880 LINC00473A8K010 186 aa11.33□□□□□ -0.6
ITGB4-202ENST00000449880 NPIPB5A8MRT5 1133 aa11.33□□□□□ -0.6
ITGB4-202ENST00000449880 MDC1Q14676 2089 aaKnown RBP11.33□□□□□ -0.6
ITGB4-202ENST00000449880 ZNF138P52744 262 aa11.33□□□□□ -0.6
ITGB4-202ENST00000449880 DEFB125Q8N687 156 aa11.33□□□□□ -0.6
ITGB4-202ENST00000449880 IGHV1-18A0A0C4DH31 117 aa11.33□□□□□ -0.6
ITGB4-202ENST00000449880 RNF144BQ7Z419 303 aa11.33□□□□□ -0.6
ITGB4-202ENST00000449880 EXOC3-AS1Q8N2X6 119 aa11.33□□□□□ -0.6
ITGB4-202ENST00000449880 EP400Q96L91 3159 aa11.33□□□□□ -0.6
ITGB4-202ENST00000449880 C9JAW5 83 aa11.32□□□□□ -0.6
ITGB4-202ENST00000449880 LY6DQ14210 128 aa11.32□□□□□ -0.6
ITGB4-202ENST00000449880 Q8N8P6 123 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms