RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 A8MTW9 85 aa10.18□□□□□ -0.78
RTFDC1-204ENST00000449062 INMT-MINDY4F8WBC2 141 aa10.18□□□□□ -0.78
RTFDC1-204ENST00000449062 L7N2F9 121 aa10.18□□□□□ -0.78
RTFDC1-204ENST00000449062 DEFB4AO15263 64 aa10.18□□□□□ -0.78
RTFDC1-204ENST00000449062 CST7O76096 145 aa10.18□□□□□ -0.78
RTFDC1-204ENST00000449062 MEOX2P50222 304 aa10.18□□□□□ -0.78
RTFDC1-204ENST00000449062 VAMP2P63027 116 aa10.18□□□□□ -0.78
RTFDC1-204ENST00000449062 SLC38A11Q08AI6 406 aa10.18□□□□□ -0.78
RTFDC1-204ENST00000449062 TMEM252Q8N6L7 170 aa10.18□□□□□ -0.78
RTFDC1-204ENST00000449062 ENKURQ8TC29 256 aa10.18□□□□□ -0.78
RTFDC1-204ENST00000449062 TMEM37Q8WXS4 190 aa10.18□□□□□ -0.78
RTFDC1-204ENST00000449062 UHRF2Q96PU4 802 aa10.18□□□□□ -0.78
RTFDC1-204ENST00000449062 MGAT4CQ9UBM8 478 aa10.18□□□□□ -0.78
RTFDC1-204ENST00000449062 IGHV4-28A0A0C4DH34 117 aa10.17□□□□□ -0.78
RTFDC1-204ENST00000449062 A0A0J9YX75 114 aa10.17□□□□□ -0.78
RTFDC1-204ENST00000449062 IGSF23A1L1A6 192 aa10.17□□□□□ -0.78
RTFDC1-204ENST00000449062 F6UB75 175 aa10.17□□□□□ -0.78
RTFDC1-204ENST00000449062 SIX6O95475 246 aa10.17□□□□□ -0.78
RTFDC1-204ENST00000449062 CAV2P51636 162 aa10.17□□□□□ -0.78
RTFDC1-204ENST00000449062 PXDC1Q5TGL8 231 aa10.17□□□□□ -0.78
RTFDC1-204ENST00000449062 SAMD13Q5VXD3 122 aa10.17□□□□□ -0.78
RTFDC1-204ENST00000449062 SPATA31B1PQ5VZV4 182 aa10.17□□□□□ -0.78
RTFDC1-204ENST00000449062 ZNF709Q8N972 641 aa10.17□□□□□ -0.78
RTFDC1-204ENST00000449062 CHAC2Q8WUX2 184 aa10.17□□□□□ -0.78
RTFDC1-204ENST00000449062 ARL6Q9H0F7 186 aa10.17□□□□□ -0.78
RTFDC1-204ENST00000449062 GPN1Q9HCN4 374 aaPredicted RBP10.17□□□□□ -0.78
RTFDC1-204ENST00000449062 XCL2Q9UBD3 114 aa10.17□□□□□ -0.78
RTFDC1-204ENST00000449062 WDR83OSQ9Y284 106 aa10.17□□□□□ -0.78
RTFDC1-204ENST00000449062 ELOA3CA0A087WX78 387 aaPredicted RBP10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 CXorf65A6NEN9 183 aa10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 H0YIZ8 118 aa10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 GOSR2O14653 212 aa10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 PRAF2O60831 178 aa10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 OR5G3P0C626 314 aa10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 MIFP14174 115 aa10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 RPL7P18124 248 aaKnown RBP10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 S100A7P31151 101 aa10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 SULT1A1P50225 295 aa10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 BCAP31P51572 246 aa10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 NANOS2P60321 138 aaKnown RBP10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 RAP2BP61225 183 aa10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 NUTF2P61970 127 aaKnown RBP10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 PRR20EP86478 221 aa10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 PRR20CP86479 221 aa10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 PRR20DP86480 221 aa10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 PRR20BP86481 221 aa10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 PRR20AP86496 221 aa10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 PMS2P11Q13670 270 aa10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 IGFL4Q6B9Z1 124 aa10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 AMTNQ6UX39 209 aa10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 ZNF705AQ6ZN79 300 aaPredicted RBP10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 C16orf92Q96LL3 132 aa10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 ARV1Q9H2C2 271 aa10.16□□□□□ -0.78
RTFDC1-204ENST00000449062 VPS13DQ5THJ4 4388 aa10.15□□□□□ -0.78
RTFDC1-204ENST00000449062 A0A087X0K7 114 aa10.15□□□□□ -0.78
RTFDC1-204ENST00000449062 NUPR2A6NF83 97 aa10.15□□□□□ -0.78
RTFDC1-204ENST00000449062 PVALBP20472 110 aaPredicted RBP10.15□□□□□ -0.78
RTFDC1-204ENST00000449062 S100A11P31949 105 aa10.15□□□□□ -0.78
RTFDC1-204ENST00000449062 H2BFSP57053 126 aa10.15□□□□□ -0.78
RTFDC1-204ENST00000449062 FAM78BQ5VT40 261 aa10.15□□□□□ -0.78
RTFDC1-204ENST00000449062 ZNF546Q86UE3 836 aa10.15□□□□□ -0.78
RTFDC1-204ENST00000449062 C11orf45Q8TAV5 145 aa10.15□□□□□ -0.78
RTFDC1-204ENST00000449062 PHLDA1Q8WV24 401 aaPredicted RBP10.15□□□□□ -0.78
RTFDC1-204ENST00000449062 C1QTNF4Q9BXJ3 329 aa10.15□□□□□ -0.78
RTFDC1-204ENST00000449062 NMES1Q9C002 83 aa10.15□□□□□ -0.78
RTFDC1-204ENST00000449062 HRH4Q9H3N8 390 aa10.15□□□□□ -0.78
RTFDC1-204ENST00000449062 RPRMQ9NS64 109 aa10.15□□□□□ -0.78
RTFDC1-204ENST00000449062 UQCC1Q9NVA1 299 aa10.15□□□□□ -0.78
RTFDC1-204ENST00000449062 ZNF705FA8MVS1 300 aaPredicted RBP10.14□□□□□ -0.79
RTFDC1-204ENST00000449062 IGKV3-20P01619 116 aa10.14□□□□□ -0.79
RTFDC1-204ENST00000449062 ZNF705DP0CH99 300 aaPredicted RBP10.14□□□□□ -0.79
RTFDC1-204ENST00000449062 ZNF705BP0CI00 300 aaPredicted RBP10.14□□□□□ -0.79
RTFDC1-204ENST00000449062 CAMLGP49069 296 aa10.14□□□□□ -0.79
RTFDC1-204ENST00000449062 S100A10P60903 97 aa10.14□□□□□ -0.79
RTFDC1-204ENST00000449062 MORN5Q5VZ52 161 aa10.14□□□□□ -0.79
RTFDC1-204ENST00000449062 NEU1Q99519 415 aa10.14□□□□□ -0.79
RTFDC1-204ENST00000449062 RNF126Q9BV68 326 aa10.14□□□□□ -0.79
RTFDC1-204ENST00000449062 DNAJC4Q9NNZ3 241 aa10.14□□□□□ -0.79
RTFDC1-204ENST00000449062 CXCL3P19876 107 aa10.13□□□□□ -0.79
RTFDC1-204ENST00000449062 RPL29P47914 159 aaKnown RBP10.13□□□□□ -0.79
RTFDC1-204ENST00000449062 PSG9Q00887 426 aa10.13□□□□□ -0.79
RTFDC1-204ENST00000449062 NHLH2Q02577 135 aa10.13□□□□□ -0.79
RTFDC1-204ENST00000449062 ATP6V1FQ16864 119 aa10.13□□□□□ -0.79
RTFDC1-204ENST00000449062 MIC13Q5XKP0 118 aa10.13□□□□□ -0.79
RTFDC1-204ENST00000449062 EBLN2Q6P2I7 272 aa10.13□□□□□ -0.79
RTFDC1-204ENST00000449062 LINC00305Q7Z4B0 112 aa10.13□□□□□ -0.79
RTFDC1-204ENST00000449062 C1orf158Q8N1D5 194 aa10.13□□□□□ -0.79
RTFDC1-204ENST00000449062 RNF182Q8N6D2 247 aa10.13□□□□□ -0.79
RTFDC1-204ENST00000449062 OR4B1Q8NGF8 309 aa10.13□□□□□ -0.79
RTFDC1-204ENST00000449062 SLC35B3Q9H1N7 401 aa10.13□□□□□ -0.79
RTFDC1-204ENST00000449062 OR5AC2Q9NZP5 309 aa10.13□□□□□ -0.79
RTFDC1-204ENST00000449062 JTBO76095 146 aa10.12□□□□□ -0.79
RTFDC1-204ENST00000449062 HLA-DMBP28068 263 aa10.12□□□□□ -0.79
RTFDC1-204ENST00000449062 FXYD7P58549 80 aa10.12□□□□□ -0.79
RTFDC1-204ENST00000449062 DEFA1P59665 94 aa10.12□□□□□ -0.79
RTFDC1-204ENST00000449062 DEFA3P59666 94 aa10.12□□□□□ -0.79
RTFDC1-204ENST00000449062 CYCSP99999 105 aaKnown RBP10.12□□□□□ -0.79
RTFDC1-204ENST00000449062 OPCMLQ14982 345 aa10.12□□□□□ -0.79
RTFDC1-204ENST00000449062 S100A7AQ86SG5 101 aa10.12□□□□□ -0.79
RTFDC1-204ENST00000449062 MFFQ9GZY8 342 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms